RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 LSM5Q9Y4Y9 91 aaKnown RBP6.09□□□□□ -1.43
PNKP-229ENST00000637897 WSB1Q9Y6I7 421 aa6.09□□□□□ -1.43
PNKP-229ENST00000637897 DYNC2H1Q8NCM8 4307 aaKnown RBP6.09□□□□□ -1.43
PNKP-229ENST00000637897 BIRC6Q9NR09 4857 aa6.09□□□□□ -1.44
PNKP-229ENST00000637897 DNAH7Q8WXX0 4024 aa6.08□□□□□ -1.44
PNKP-229ENST00000637897 H0YJW9 148 aa6.08□□□□□ -1.44
PNKP-229ENST00000637897 I3L521 148 aa6.08□□□□□ -1.44
PNKP-229ENST00000637897 CCL24O00175 119 aa6.08□□□□□ -1.44
PNKP-229ENST00000637897 ITGB1BP1O14713 200 aa6.08□□□□□ -1.44
PNKP-229ENST00000637897 ATP6V0E1O15342 81 aa6.08□□□□□ -1.44
PNKP-229ENST00000637897 IGLV2-14P01704 120 aa6.08□□□□□ -1.44
PNKP-229ENST00000637897 HLA-DRB1P01911 266 aa6.08□□□□□ -1.44
PNKP-229ENST00000637897 NMBP08949 121 aa6.08□□□□□ -1.44
PNKP-229ENST00000637897 RRASP10301 218 aa6.08□□□□□ -1.44
PNKP-229ENST00000637897 CDX1P47902 265 aaPredicted RBP6.08□□□□□ -1.44
PNKP-229ENST00000637897 GNB1P62873 340 aa6.08□□□□□ -1.44
PNKP-229ENST00000637897 FOXE3Q13461 319 aa6.08□□□□□ -1.44
PNKP-229ENST00000637897 C5orf64Q2M2E5 130 aa6.08□□□□□ -1.44
PNKP-229ENST00000637897 TEX38Q6PEX7 206 aa6.08□□□□□ -1.44
PNKP-229ENST00000637897 ZNF66Q6ZN08 573 aa6.08□□□□□ -1.44
PNKP-229ENST00000637897 BAP18Q8IXM2 172 aa6.08□□□□□ -1.44
PNKP-229ENST00000637897 ZNF491Q8N8L2 437 aa6.08□□□□□ -1.44
PNKP-229ENST00000637897 RNASE11Q8TAA1 199 aaKnown RBP6.08□□□□□ -1.44
PNKP-229ENST00000637897 CITED4Q96RK1 184 aa6.08□□□□□ -1.44
PNKP-229ENST00000637897 HSD17B10Q99714 261 aaKnown RBP6.08□□□□□ -1.44
PNKP-229ENST00000637897 OR2D2Q9H210 308 aa6.08□□□□□ -1.44
PNKP-229ENST00000637897 PFDN2Q9UHV9 154 aa6.08□□□□□ -1.44
PNKP-229ENST00000637897 LSM4Q9Y4Z0 139 aaKnown RBP6.08□□□□□ -1.44
PNKP-229ENST00000637897 SORL1Q92673 2214 aa6.08□□□□□ -1.44
PNKP-229ENST00000637897 EPPK1P58107 5090 aaKnown RBP6.08□□□□□ -1.44
PNKP-229ENST00000637897 STAB2Q8WWQ8 2551 aa6.07□□□□□ -1.44
PNKP-229ENST00000637897 BORCS7-ASMTA0A0B4J1R7 106 aa6.07□□□□□ -1.44
PNKP-229ENST00000637897 ANKRD34BA5PLL1 514 aa6.07□□□□□ -1.44
PNKP-229ENST00000637897 MSGN1A6NI15 193 aa6.07□□□□□ -1.44
PNKP-229ENST00000637897 WRBO00258 174 aa6.07□□□□□ -1.44
PNKP-229ENST00000637897 TXNL1O43396 289 aa6.07□□□□□ -1.44
PNKP-229ENST00000637897 JTBO76095 146 aa6.07□□□□□ -1.44
PNKP-229ENST00000637897 ELANEP08246 267 aa6.07□□□□□ -1.44
PNKP-229ENST00000637897 IL3RAP26951 378 aa6.07□□□□□ -1.44
PNKP-229ENST00000637897 CRIP2P52943 208 aaPredicted RBP6.07□□□□□ -1.44
PNKP-229ENST00000637897 VAMP2P63027 116 aa6.07□□□□□ -1.44
PNKP-229ENST00000637897 EIF4EBP1Q13541 118 aaPredicted RBP6.07□□□□□ -1.44
PNKP-229ENST00000637897 MMDQ15546 238 aa6.07□□□□□ -1.44
PNKP-229ENST00000637897 COMMD7Q86VX2 200 aa6.07□□□□□ -1.44
PNKP-229ENST00000637897 FAM219AQ8IW50 185 aa6.07□□□□□ -1.44
PNKP-229ENST00000637897 COMMD1Q8N668 190 aa6.07□□□□□ -1.44
PNKP-229ENST00000637897 ZNF383Q8NA42 475 aa6.07□□□□□ -1.44
PNKP-229ENST00000637897 OR5AN1Q8NGI8 311 aa6.07□□□□□ -1.44
PNKP-229ENST00000637897 CD300LFQ8TDQ1 290 aa6.07□□□□□ -1.44
PNKP-229ENST00000637897 RASL11BQ9BPW5 248 aa6.07□□□□□ -1.44
PNKP-229ENST00000637897 SLC25A31Q9H0C2 315 aa6.07□□□□□ -1.44
PNKP-229ENST00000637897 FBXL15Q9H469 300 aa6.07□□□□□ -1.44
PNKP-229ENST00000637897 CYTL1Q9NRR1 136 aa6.07□□□□□ -1.44
PNKP-229ENST00000637897 SACSQ9NZJ4 4579 aa6.07□□□□□ -1.44
PNKP-229ENST00000637897 TENM3Q9P273 2699 aa6.06□□□□□ -1.44
PNKP-229ENST00000637897 FAM90A26D6RGX4 464 aa6.06□□□□□ -1.44
PNKP-229ENST00000637897 NBR2O15453 112 aa6.06□□□□□ -1.44
PNKP-229ENST00000637897 PITX3O75364 302 aa6.06□□□□□ -1.44
PNKP-229ENST00000637897 RBMXL2O75526 392 aaKnown RBP6.06□□□□□ -1.44
PNKP-229ENST00000637897 IGLV2-23P01705 113 aa6.06□□□□□ -1.44
PNKP-229ENST00000637897 IGKV1-16P04430 117 aa6.06□□□□□ -1.44
PNKP-229ENST00000637897 CRYGBP07316 175 aa6.06□□□□□ -1.44
PNKP-229ENST00000637897 LPAR6P43657 344 aa6.06□□□□□ -1.44
PNKP-229ENST00000637897 AKR1C2P52895 323 aa6.06□□□□□ -1.44
PNKP-229ENST00000637897 SLC35B1P78383 322 aa6.06□□□□□ -1.44
PNKP-229ENST00000637897 CX3CL1P78423 397 aa6.06□□□□□ -1.44
PNKP-229ENST00000637897 ID3Q02535 119 aa6.06□□□□□ -1.44
PNKP-229ENST00000637897 ZNF585BQ52M93 769 aa6.06□□□□□ -1.44
PNKP-229ENST00000637897 UBAC2Q8NBM4 344 aa6.06□□□□□ -1.44
PNKP-229ENST00000637897 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.06□□□□□ -1.44
PNKP-229ENST00000637897 DMBX1Q8NFW5 382 aa6.06□□□□□ -1.44
PNKP-229ENST00000637897 C4orf3Q8WVX3 66 aa6.06□□□□□ -1.44
PNKP-229ENST00000637897 TCTEX1D2Q8WW35 142 aa6.06□□□□□ -1.44
PNKP-229ENST00000637897 GPR146Q96CH1 333 aa6.06□□□□□ -1.44
PNKP-229ENST00000637897 PRR25Q96S07 402 aa6.06□□□□□ -1.44
PNKP-229ENST00000637897 RAB40CQ96S21 281 aa6.06□□□□□ -1.44
PNKP-229ENST00000637897 GPHA2Q96T91 129 aa6.06□□□□□ -1.44
PNKP-229ENST00000637897 C11orf1Q9H5F2 150 aa6.06□□□□□ -1.44
PNKP-229ENST00000637897 COA4Q9NYJ1 87 aa6.06□□□□□ -1.44
PNKP-229ENST00000637897 RNF150Q9ULK6 438 aa6.06□□□□□ -1.44
PNKP-229ENST00000637897 RCL1Q9Y2P8 373 aaKnown RBP6.06□□□□□ -1.44
PNKP-229ENST00000637897 SRRM4A7MD48 611 aaKnown RBP6.05□□□□□ -1.44
PNKP-229ENST00000637897 NUDT19A8MXV4 375 aa6.05□□□□□ -1.44
PNKP-229ENST00000637897 RRHO14718 337 aa6.05□□□□□ -1.44
PNKP-229ENST00000637897 SSSCA1O60232 199 aa6.05□□□□□ -1.44
PNKP-229ENST00000637897 IGKV1-39P01597 117 aa6.05□□□□□ -1.44
PNKP-229ENST00000637897 IGKV1D-39P04432 117 aa6.05□□□□□ -1.44
PNKP-229ENST00000637897 KIR2DS2P43631 304 aa6.05□□□□□ -1.44
PNKP-229ENST00000637897 RAB9AP51151 201 aa6.05□□□□□ -1.44
PNKP-229ENST00000637897 TAS2R30P59541 319 aa6.05□□□□□ -1.44
PNKP-229ENST00000637897 POLR2GP62487 172 aaKnown RBP eCLIP6.05□□□□□ -1.44
PNKP-229ENST00000637897 RUNX1Q01196 453 aa6.05□□□□□ -1.44
PNKP-229ENST00000637897 BAXQ07812 192 aa6.05□□□□□ -1.44
PNKP-229ENST00000637897 PJVKQ0ZLH3 352 aa6.05□□□□□ -1.44
PNKP-229ENST00000637897 PSG5Q15238 335 aa6.05□□□□□ -1.44
PNKP-229ENST00000637897 CXorf66Q5JRM2 361 aaPredicted RBP6.05□□□□□ -1.44
PNKP-229ENST00000637897 FAM71F2Q6NXP2 309 aa6.05□□□□□ -1.44
PNKP-229ENST00000637897 OR2C3Q8N628 320 aa6.05□□□□□ -1.44
PNKP-229ENST00000637897 OR11H1Q8NG94 326 aa6.05□□□□□ -1.44
PNKP-229ENST00000637897 RNF141Q8WVD5 230 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms