RNA–Protein interactions for RNA: ENST00000621093.4

POLR2J3-221, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene POLR2J3, Length 348 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-221ENST00000621093 NDUFB8O95169 186 aa8.5□□□□□ -1.05
POLR2J3-221ENST00000621093 TRGV3P03979 118 aa8.5□□□□□ -1.05
POLR2J3-221ENST00000621093 SLC25A6P12236 298 aa8.5□□□□□ -1.05
POLR2J3-221ENST00000621093 HOXA1P49639 335 aaPredicted RBP8.5□□□□□ -1.05
POLR2J3-221ENST00000621093 TNFRSF9Q07011 255 aa8.5□□□□□ -1.05
POLR2J3-221ENST00000621093 OR2C3Q8N628 320 aa8.5□□□□□ -1.05
POLR2J3-221ENST00000621093 COMMD1Q8N668 190 aa8.5□□□□□ -1.05
POLR2J3-221ENST00000621093 ZNF491Q8N8L2 437 aa8.5□□□□□ -1.05
POLR2J3-221ENST00000621093 RNF152Q8N8N0 203 aa8.5□□□□□ -1.05
POLR2J3-221ENST00000621093 OR4D5Q8NGN0 318 aa8.5□□□□□ -1.05
POLR2J3-221ENST00000621093 MYOZ3Q8TDC0 251 aa8.5□□□□□ -1.05
POLR2J3-221ENST00000621093 FANCD2OSQ96PS1 177 aa8.5□□□□□ -1.05
POLR2J3-221ENST00000621093 OR5B12Q96R08 314 aa8.5□□□□□ -1.05
POLR2J3-221ENST00000621093 SRSF8Q9BRL6 282 aaKnown RBP8.5□□□□□ -1.05
POLR2J3-221ENST00000621093 GNB4Q9HAV0 340 aa8.5□□□□□ -1.05
POLR2J3-221ENST00000621093 GSKIPQ9P0R6 139 aa8.5□□□□□ -1.05
POLR2J3-221ENST00000621093 S4R3C0 116 aa8.5□□□□□ -1.05
POLR2J3-221ENST00000621093 SSNA1O43805 119 aa8.49□□□□□ -1.05
POLR2J3-221ENST00000621093 SCGB1D2O95969 90 aa8.49□□□□□ -1.05
POLR2J3-221ENST00000621093 IGHV3-11P01762 117 aa8.49□□□□□ -1.05
POLR2J3-221ENST00000621093 IAPPP10997 89 aa8.49□□□□□ -1.05
POLR2J3-221ENST00000621093 RPL23AP62750 156 aaKnown RBP8.49□□□□□ -1.05
POLR2J3-221ENST00000621093 PDLIM3Q53GG5 364 aaPredicted RBP8.49□□□□□ -1.05
POLR2J3-221ENST00000621093 TMEM65Q6PI78 240 aa8.49□□□□□ -1.05
POLR2J3-221ENST00000621093 SHISA2Q6UWI4 295 aa8.49□□□□□ -1.05
POLR2J3-221ENST00000621093 GSG1LQ6UXU4 331 aa8.49□□□□□ -1.05
POLR2J3-221ENST00000621093 P2RX4Q99571 388 aa8.49□□□□□ -1.05
POLR2J3-221ENST00000621093 F11RQ9Y624 299 aaKnown RBP8.49□□□□□ -1.05
POLR2J3-221ENST00000621093 STAB1Q9NY15 2570 aa8.49□□□□□ -1.05
POLR2J3-221ENST00000621093 IGLV11-55A0A075B6I3 123 aa8.48□□□□□ -1.05
POLR2J3-221ENST00000621093 TRBV9A0A0B4J1U6 114 aa8.48□□□□□ -1.05
POLR2J3-221ENST00000621093 IGHV3-21A0A0B4J1V1 117 aa8.48□□□□□ -1.05
POLR2J3-221ENST00000621093 H3BUA1 57 aa8.48□□□□□ -1.05
POLR2J3-221ENST00000621093 IGHV3-23P01764 117 aa8.48□□□□□ -1.05
POLR2J3-221ENST00000621093 RNASE2P10153 161 aaKnown RBP8.48□□□□□ -1.05
POLR2J3-221ENST00000621093 DEFA4P12838 97 aa8.48□□□□□ -1.05
POLR2J3-221ENST00000621093 POLR2GP62487 172 aaKnown RBP eCLIP8.48□□□□□ -1.05
POLR2J3-221ENST00000621093 ERHP84090 104 aaKnown RBP8.48□□□□□ -1.05
POLR2J3-221ENST00000621093 RHOGP84095 191 aa8.48□□□□□ -1.05
POLR2J3-221ENST00000621093 ID3Q02535 119 aa8.48□□□□□ -1.05
POLR2J3-221ENST00000621093 SLC25A24Q6NUK1 477 aa8.48□□□□□ -1.05
POLR2J3-221ENST00000621093 HSD17B13Q7Z5P4 300 aaPredicted RBP8.48□□□□□ -1.05
POLR2J3-221ENST00000621093 KLHL30-AS1Q8NEE0 82 aa8.48□□□□□ -1.05
POLR2J3-221ENST00000621093 DTD1Q8TEA8 209 aa8.48□□□□□ -1.05
POLR2J3-221ENST00000621093 C2orf50Q96LR7 162 aa8.48□□□□□ -1.05
POLR2J3-221ENST00000621093 DUX3Q96PT4 197 aa8.48□□□□□ -1.05
POLR2J3-221ENST00000621093 ENY2Q9NPA8 101 aa8.48□□□□□ -1.05
POLR2J3-221ENST00000621093 HEYLQ9NQ87 328 aaPredicted RBP8.48□□□□□ -1.05
POLR2J3-221ENST00000621093 MGAT4CQ9UBM8 478 aa8.48□□□□□ -1.05
POLR2J3-221ENST00000621093 FBXL7Q9UJT9 491 aa8.48□□□□□ -1.05
POLR2J3-221ENST00000621093 TSSC4Q9Y5U2 329 aaPredicted RBP8.48□□□□□ -1.05
POLR2J3-221ENST00000621093 NUDT19A8MXV4 375 aa8.47□□□□□ -1.05
POLR2J3-221ENST00000621093 FAM90A26D6RGX4 464 aa8.47□□□□□ -1.05
POLR2J3-221ENST00000621093 INS-IGF2F8WCM5 200 aa8.47□□□□□ -1.05
POLR2J3-221ENST00000621093 WRBO00258 174 aa8.47□□□□□ -1.05
POLR2J3-221ENST00000621093 SYNGR2O43760 224 aa8.47□□□□□ -1.05
POLR2J3-221ENST00000621093 BRI3O95415 125 aa8.47□□□□□ -1.05
POLR2J3-221ENST00000621093 MBPP02686 304 aaPredicted RBP8.47□□□□□ -1.05
POLR2J3-221ENST00000621093 CXCL3P19876 107 aa8.47□□□□□ -1.05
POLR2J3-221ENST00000621093 NKX2-1P43699 371 aaPredicted RBP8.47□□□□□ -1.05
POLR2J3-221ENST00000621093 CDX1P47902 265 aaPredicted RBP8.47□□□□□ -1.05
POLR2J3-221ENST00000621093 H2BFSP57053 126 aa8.47□□□□□ -1.05
POLR2J3-221ENST00000621093 IL15RAQ13261 267 aa8.47□□□□□ -1.05
POLR2J3-221ENST00000621093 FCN2Q15485 313 aa8.47□□□□□ -1.05
POLR2J3-221ENST00000621093 KLK9Q2XQG4 91 aa8.47□□□□□ -1.05
POLR2J3-221ENST00000621093 DEFB136Q30KP8 78 aa8.47□□□□□ -1.05
POLR2J3-221ENST00000621093 C8orf86Q6ZUL3 223 aa8.47□□□□□ -1.05
POLR2J3-221ENST00000621093 NDUFA11Q86Y39 141 aa8.47□□□□□ -1.05
POLR2J3-221ENST00000621093 ZNF114Q8NC26 417 aa8.47□□□□□ -1.05
POLR2J3-221ENST00000621093 TMEM170AQ8WVE7 144 aa8.47□□□□□ -1.05
POLR2J3-221ENST00000621093 SLA2Q9H6Q3 261 aa8.47□□□□□ -1.05
POLR2J3-221ENST00000621093 ZFP57Q9NU63 452 aa8.47□□□□□ -1.05
POLR2J3-221ENST00000621093 KLK9Q9UKQ9 250 aa8.47□□□□□ -1.05
POLR2J3-221ENST00000621093 RCL1Q9Y2P8 373 aaKnown RBP8.47□□□□□ -1.05
POLR2J3-221ENST00000621093 MFSD2BA6NFX1 497 aa8.46□□□□□ -1.06
POLR2J3-221ENST00000621093 K7EPK0 472 aa8.46□□□□□ -1.06
POLR2J3-221ENST00000621093 SSSCA1O60232 199 aa8.46□□□□□ -1.06
POLR2J3-221ENST00000621093 TMEM50AO95807 157 aa8.46□□□□□ -1.06
POLR2J3-221ENST00000621093 TSPAN15O95858 294 aa8.46□□□□□ -1.06
POLR2J3-221ENST00000621093 IGHV3-48P01763 117 aa8.46□□□□□ -1.06
POLR2J3-221ENST00000621093 SNCAP37840 140 aa8.46□□□□□ -1.06
POLR2J3-221ENST00000621093 C15orf32Q32M92 178 aa8.46□□□□□ -1.06
POLR2J3-221ENST00000621093 BSXQ3C1V8 233 aa8.46□□□□□ -1.06
POLR2J3-221ENST00000621093 MRPL41Q8IXM3 137 aaKnown RBP8.46□□□□□ -1.06
POLR2J3-221ENST00000621093 OR11H7Q8NGC8 314 aa8.46□□□□□ -1.06
POLR2J3-221ENST00000621093 OR1P1Q8NH06 330 aa8.46□□□□□ -1.06
POLR2J3-221ENST00000621093 SPATA3Q8NHX4 192 aa8.46□□□□□ -1.06
POLR2J3-221ENST00000621093 MISP3Q96FF7 219 aa8.46□□□□□ -1.06
POLR2J3-221ENST00000621093 UBE2E2Q96LR5 201 aa8.46□□□□□ -1.06
POLR2J3-221ENST00000621093 MED28Q9H204 178 aa8.46□□□□□ -1.06
POLR2J3-221ENST00000621093 HIPK2Q9H2X6 1198 aa8.46□□□□□ -1.06
POLR2J3-221ENST00000621093 LSM5Q9Y4Y9 91 aaKnown RBP8.46□□□□□ -1.06
POLR2J3-221ENST00000621093 ANKRD34BA5PLL1 514 aa8.45□□□□□ -1.06
POLR2J3-221ENST00000621093 FAM223BA6NKX1 122 aa8.45□□□□□ -1.06
POLR2J3-221ENST00000621093 H3BP45 60 aa8.45□□□□□ -1.06
POLR2J3-221ENST00000621093 I3L521 148 aa8.45□□□□□ -1.06
POLR2J3-221ENST00000621093 K7EIM0 57 aa8.45□□□□□ -1.06
POLR2J3-221ENST00000621093 MED6O75586 246 aa8.45□□□□□ -1.06
POLR2J3-221ENST00000621093 IFNA10P01566 189 aa8.45□□□□□ -1.06
POLR2J3-221ENST00000621093 TRBV12-3P01733 135 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms