RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 FOXE3Q13461 319 aa10.6□□□□□ -0.71
NEK3-210ENST00000620675 THOC7Q6I9Y2 204 aaKnown RBP10.6□□□□□ -0.71
NEK3-210ENST00000620675 OR2C3Q8N628 320 aa10.6□□□□□ -0.71
NEK3-210ENST00000620675 RNF152Q8N8N0 203 aa10.6□□□□□ -0.71
NEK3-210ENST00000620675 ZBTB8BQ8NAP8 495 aaPredicted RBP10.6□□□□□ -0.71
NEK3-210ENST00000620675 TMEM170AQ8WVE7 144 aa10.6□□□□□ -0.71
NEK3-210ENST00000620675 P2RX4Q99571 388 aa10.6□□□□□ -0.71
NEK3-210ENST00000620675 PDCD10Q9BUL8 212 aa10.6□□□□□ -0.71
NEK3-210ENST00000620675 GON7Q9BXV9 100 aa10.6□□□□□ -0.71
NEK3-210ENST00000620675 GNB4Q9HAV0 340 aa10.6□□□□□ -0.71
NEK3-210ENST00000620675 TCRBV4S1A1TA0A5B7 111 aa10.59□□□□□ -0.71
NEK3-210ENST00000620675 C5orf51A6NDU8 294 aa10.59□□□□□ -0.71
NEK3-210ENST00000620675 CEBPZOSA8MTT3 80 aa10.59□□□□□ -0.71
NEK3-210ENST00000620675 OR2J3O76001 311 aa10.59□□□□□ -0.71
NEK3-210ENST00000620675 IGHV3-11P01762 117 aa10.59□□□□□ -0.71
NEK3-210ENST00000620675 TRGV3P03979 118 aa10.59□□□□□ -0.71
NEK3-210ENST00000620675 IAPPP10997 89 aa10.59□□□□□ -0.71
NEK3-210ENST00000620675 SLC25A6P12236 298 aa10.59□□□□□ -0.71
NEK3-210ENST00000620675 CXCL3P19876 107 aa10.59□□□□□ -0.71
NEK3-210ENST00000620675 H2BFSP57053 126 aa10.59□□□□□ -0.71
NEK3-210ENST00000620675 TPPP2P59282 170 aa10.59□□□□□ -0.71
NEK3-210ENST00000620675 NSUN5P1Q3KNT7 163 aa10.59□□□□□ -0.71
NEK3-210ENST00000620675 PDLIM3Q53GG5 364 aaPredicted RBP10.59□□□□□ -0.71
NEK3-210ENST00000620675 OR4X2Q8NGF9 303 aa10.59□□□□□ -0.71
NEK3-210ENST00000620675 OR5M8Q8NGP6 311 aa10.59□□□□□ -0.71
NEK3-210ENST00000620675 OR52E5Q8NH55 327 aa10.59□□□□□ -0.71
NEK3-210ENST00000620675 MYOZ3Q8TDC0 251 aa10.59□□□□□ -0.71
NEK3-210ENST00000620675 MGAM2Q2M2H8 2515 aa10.59□□□□□ -0.71
NEK3-210ENST00000620675 IGHV3-21A0A0B4J1V1 117 aa10.59□□□□□ -0.71
NEK3-210ENST00000620675 NDUFB8O95169 186 aa10.59□□□□□ -0.71
NEK3-210ENST00000620675 SCGB1D2O95969 90 aa10.59□□□□□ -0.71
NEK3-210ENST00000620675 ELANEP08246 267 aa10.59□□□□□ -0.71
NEK3-210ENST00000620675 POLR2GP62487 172 aaKnown RBP eCLIP10.59□□□□□ -0.71
NEK3-210ENST00000620675 TMEM68Q96MH6 324 aa10.59□□□□□ -0.71
NEK3-210ENST00000620675 IGLV11-55A0A075B6I3 123 aa10.58□□□□□ -0.72
NEK3-210ENST00000620675 TRBV9A0A0B4J1U6 114 aa10.58□□□□□ -0.72
NEK3-210ENST00000620675 RHOGP84095 191 aa10.58□□□□□ -0.72
NEK3-210ENST00000620675 FCN2Q15485 313 aa10.58□□□□□ -0.72
NEK3-210ENST00000620675 DEFB136Q30KP8 78 aa10.58□□□□□ -0.72
NEK3-210ENST00000620675 ZNF491Q8N8L2 437 aa10.58□□□□□ -0.72
NEK3-210ENST00000620675 DUX3Q96PT4 197 aa10.58□□□□□ -0.72
NEK3-210ENST00000620675 TMEM50AO95807 157 aa10.57□□□□□ -0.72
NEK3-210ENST00000620675 IGHV3-48P01763 117 aa10.57□□□□□ -0.72
NEK3-210ENST00000620675 IGHV3-23P01764 117 aa10.57□□□□□ -0.72
NEK3-210ENST00000620675 MBPP02686 304 aaPredicted RBP10.57□□□□□ -0.72
NEK3-210ENST00000620675 RNASE2P10153 161 aaKnown RBP10.57□□□□□ -0.72
NEK3-210ENST00000620675 DEFA4P12838 97 aa10.57□□□□□ -0.72
NEK3-210ENST00000620675 RPL23AP62750 156 aaKnown RBP10.57□□□□□ -0.72
NEK3-210ENST00000620675 ID3Q02535 119 aa10.57□□□□□ -0.72
NEK3-210ENST00000620675 IL15RAQ13261 267 aa10.57□□□□□ -0.72
NEK3-210ENST00000620675 TMEM65Q6PI78 240 aa10.57□□□□□ -0.72
NEK3-210ENST00000620675 OR11H7Q8NGC8 314 aa10.57□□□□□ -0.72
NEK3-210ENST00000620675 DTD1Q8TEA8 209 aa10.57□□□□□ -0.72
NEK3-210ENST00000620675 SRSF8Q9BRL6 282 aaKnown RBP10.57□□□□□ -0.72
NEK3-210ENST00000620675 HEYLQ9NQ87 328 aaPredicted RBP10.57□□□□□ -0.72
NEK3-210ENST00000620675 MGAT4CQ9UBM8 478 aa10.57□□□□□ -0.72
NEK3-210ENST00000620675 F11RQ9Y624 299 aaKnown RBP10.57□□□□□ -0.72
NEK3-210ENST00000620675 MFSD2BA6NFX1 497 aa10.57□□□□□ -0.72
NEK3-210ENST00000620675 NKX2-1P43699 371 aaPredicted RBP10.57□□□□□ -0.72
NEK3-210ENST00000620675 GSG1LQ6UXU4 331 aa10.57□□□□□ -0.72
NEK3-210ENST00000620675 C8orf86Q6ZUL3 223 aa10.57□□□□□ -0.72
NEK3-210ENST00000620675 C2orf50Q96LR7 162 aa10.57□□□□□ -0.72
NEK3-210ENST00000620675 RCL1Q9Y2P8 373 aaKnown RBP10.57□□□□□ -0.72
NEK3-210ENST00000620675 NBEAL1Q6ZS30 2694 aa10.57□□□□□ -0.72
NEK3-210ENST00000620675 NOTCH1P46531 2555 aa10.56□□□□□ -0.72
NEK3-210ENST00000620675 PIGBOS1A0A0B4J2F0 54 aa10.56□□□□□ -0.72
NEK3-210ENST00000620675 H3BP45 60 aa10.56□□□□□ -0.72
NEK3-210ENST00000620675 WRBO00258 174 aa10.56□□□□□ -0.72
NEK3-210ENST00000620675 TRBV12-3P01733 135 aa10.56□□□□□ -0.72
NEK3-210ENST00000620675 BSXQ3C1V8 233 aa10.56□□□□□ -0.72
NEK3-210ENST00000620675 SLC25A24Q6NUK1 477 aa10.56□□□□□ -0.72
NEK3-210ENST00000620675 COMMD1Q8N668 190 aa10.56□□□□□ -0.72
NEK3-210ENST00000620675 KLHL30-AS1Q8NEE0 82 aa10.56□□□□□ -0.72
NEK3-210ENST00000620675 SPATA3Q8NHX4 192 aa10.56□□□□□ -0.72
NEK3-210ENST00000620675 FBXL7Q9UJT9 491 aa10.56□□□□□ -0.72
NEK3-210ENST00000620675 TSSC4Q9Y5U2 329 aaPredicted RBP10.56□□□□□ -0.72
NEK3-210ENST00000620675 INS-IGF2F8WCM5 200 aa10.56□□□□□ -0.72
NEK3-210ENST00000620675 SYNGR2O43760 224 aa10.56□□□□□ -0.72
NEK3-210ENST00000620675 SSSCA1O60232 199 aa10.56□□□□□ -0.72
NEK3-210ENST00000620675 ERHP84090 104 aaKnown RBP10.56□□□□□ -0.72
NEK3-210ENST00000620675 MLANAQ16655 118 aa10.56□□□□□ -0.72
NEK3-210ENST00000620675 C15orf32Q32M92 178 aa10.56□□□□□ -0.72
NEK3-210ENST00000620675 ENY2Q9NPA8 101 aa10.56□□□□□ -0.72
NEK3-210ENST00000620675 FAM90A26D6RGX4 464 aa10.55□□□□□ -0.72
NEK3-210ENST00000620675 H3BUA1 57 aa10.55□□□□□ -0.72
NEK3-210ENST00000620675 PAX9P55771 341 aa10.55□□□□□ -0.72
NEK3-210ENST00000620675 RAB32Q13637 225 aa10.55□□□□□ -0.72
NEK3-210ENST00000620675 SHISA2Q6UWI4 295 aa10.55□□□□□ -0.72
NEK3-210ENST00000620675 HSD17B13Q7Z5P4 300 aaPredicted RBP10.55□□□□□ -0.72
NEK3-210ENST00000620675 ZNF114Q8NC26 417 aa10.55□□□□□ -0.72
NEK3-210ENST00000620675 OR1P1Q8NH06 330 aa10.55□□□□□ -0.72
NEK3-210ENST00000620675 MISP3Q96FF7 219 aa10.55□□□□□ -0.72
NEK3-210ENST00000620675 SLA2Q9H6Q3 261 aa10.55□□□□□ -0.72
NEK3-210ENST00000620675 LSM5Q9Y4Y9 91 aaKnown RBP10.55□□□□□ -0.72
NEK3-210ENST00000620675 I3L521 148 aa10.54□□□□□ -0.72
NEK3-210ENST00000620675 K7EIM0 57 aa10.54□□□□□ -0.72
NEK3-210ENST00000620675 K7EPK0 472 aa10.54□□□□□ -0.72
NEK3-210ENST00000620675 BRI3O95415 125 aa10.54□□□□□ -0.72
NEK3-210ENST00000620675 TSPAN15O95858 294 aa10.54□□□□□ -0.72
NEK3-210ENST00000620675 SNCAP37840 140 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms