RNA–Protein interactions for RNA: ENST00000620394.1

SRRT-218, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-218ENST00000620394 C5orf66Q9H5L9 145 aa16.44■□□□□ 0.22
SRRT-218ENST00000620394 DAZ1Q9NQZ3 744 aaKnown RBP16.44■□□□□ 0.22
SRRT-218ENST00000620394 FKBP11Q9NYL4 201 aa16.44■□□□□ 0.22
SRRT-218ENST00000620394 C21orf62Q9NYP8 219 aa16.44■□□□□ 0.22
SRRT-218ENST00000620394 DBX1A6NMT0 343 aa16.43■□□□□ 0.22
SRRT-218ENST00000620394 UCP3P55916 312 aa16.43■□□□□ 0.22
SRRT-218ENST00000620394 PHLDA2Q53GA4 152 aa16.43■□□□□ 0.22
SRRT-218ENST00000620394 SCARB1Q8WTV0 552 aa16.43■□□□□ 0.22
SRRT-218ENST00000620394 SEC22AQ96IW7 307 aa16.43■□□□□ 0.22
SRRT-218ENST00000620394 TMEM56Q96MV1 263 aa16.43■□□□□ 0.22
SRRT-218ENST00000620394 SPAG8Q99932 426 aaPredicted RBP16.43■□□□□ 0.22
SRRT-218ENST00000620394 GGTLC1Q9BX51 225 aa16.43■□□□□ 0.22
SRRT-218ENST00000620394 HINT2Q9BX68 163 aa16.43■□□□□ 0.22
SRRT-218ENST00000620394 SMIM31A0A1B0GVY4 71 aa16.42■□□□□ 0.22
SRRT-218ENST00000620394 NDUFA4O00483 81 aa16.42■□□□□ 0.22
SRRT-218ENST00000620394 ELK1P19419 428 aa16.42■□□□□ 0.22
SRRT-218ENST00000620394 S100GP29377 79 aa16.42■□□□□ 0.22
SRRT-218ENST00000620394 ADMP35318 185 aa16.42■□□□□ 0.22
SRRT-218ENST00000620394 VBP1P61758 197 aa16.42■□□□□ 0.22
SRRT-218ENST00000620394 TSPAN5P62079 268 aa16.42■□□□□ 0.22
SRRT-218ENST00000620394 TBC1D26Q86UD7 250 aa16.42■□□□□ 0.22
SRRT-218ENST00000620394 SNX29P2Q8IUI4 249 aa16.42■□□□□ 0.22
SRRT-218ENST00000620394 SLC38A6Q8IZM9 456 aa16.42■□□□□ 0.22
SRRT-218ENST00000620394 OR1P1Q8NH06 330 aa16.42■□□□□ 0.22
SRRT-218ENST00000620394 CHRDL1Q9BU40 450 aa16.42■□□□□ 0.22
SRRT-218ENST00000620394 TSPAN4O14817 238 aa16.41■□□□□ 0.22
SRRT-218ENST00000620394 IGKV1-39P01597 117 aa16.41■□□□□ 0.22
SRRT-218ENST00000620394 IGKV1D-39P04432 117 aa16.41■□□□□ 0.22
SRRT-218ENST00000620394 RBPMS2Q6ZRY4 209 aaKnown RBP16.41■□□□□ 0.22
SRRT-218ENST00000620394 ZNF114Q8NC26 417 aa16.41■□□□□ 0.22
SRRT-218ENST00000620394 ZNF414Q96IQ9 312 aa16.41■□□□□ 0.22
SRRT-218ENST00000620394 LOC102724200A0A096LPH7 203 aaPredicted RBP16.4■□□□□ 0.22
SRRT-218ENST00000620394 NUPR2A6NF83 97 aa16.4■□□□□ 0.22
SRRT-218ENST00000620394 OR2C3Q8N628 320 aa16.4■□□□□ 0.22
SRRT-218ENST00000620394 K7EMT4 169 aa16.39■□□□□ 0.21
SRRT-218ENST00000620394 HPGDSO60760 199 aa16.39■□□□□ 0.21
SRRT-218ENST00000620394 FCGR2BP31994 310 aaPredicted RBP16.39■□□□□ 0.21
SRRT-218ENST00000620394 HERC2O95714 4834 aa16.38■□□□□ 0.21
SRRT-218ENST00000620394 IGHV3-21A0A0B4J1V1 117 aa16.38■□□□□ 0.21
SRRT-218ENST00000620394 CXorf65A6NEN9 183 aa16.38■□□□□ 0.21
SRRT-218ENST00000620394 C15orf62A8K5M9 175 aa16.38■□□□□ 0.21
SRRT-218ENST00000620394 GABARAPO95166 117 aa16.38■□□□□ 0.21
SRRT-218ENST00000620394 RORCP51449 518 aa16.38■□□□□ 0.21
SRRT-218ENST00000620394 RND3P61587 244 aa16.38■□□□□ 0.21
SRRT-218ENST00000620394 PRCDQ00LT1 54 aa16.38■□□□□ 0.21
SRRT-218ENST00000620394 LHFPL1Q86WI0 220 aa16.38■□□□□ 0.21
SRRT-218ENST00000620394 OVOL2Q9BRP0 275 aa16.38■□□□□ 0.21
SRRT-218ENST00000620394 I3L2K1 104 aa16.37■□□□□ 0.21
SRRT-218ENST00000620394 CTSGP08311 255 aa16.37■□□□□ 0.21
SRRT-218ENST00000620394 H2BFWTQ7Z2G1 175 aa16.37■□□□□ 0.21
SRRT-218ENST00000620394 MRGPRFQ96AM1 343 aa16.37■□□□□ 0.21
SRRT-218ENST00000620394 ZNF486Q96H40 463 aaPredicted RBP16.37■□□□□ 0.21
SRRT-218ENST00000620394 PMS2P11Q13670 270 aa16.36■□□□□ 0.21
SRRT-218ENST00000620394 CTF1Q16619 201 aa16.36■□□□□ 0.21
SRRT-218ENST00000620394 ODF3L2Q3SX64 289 aa16.36■□□□□ 0.21
SRRT-218ENST00000620394 Q56UQ5 140 aa16.36■□□□□ 0.21
SRRT-218ENST00000620394 UBAC2Q8NBM4 344 aa16.36■□□□□ 0.21
SRRT-218ENST00000620394 OR4A16Q8NH70 328 aa16.36■□□□□ 0.21
SRRT-218ENST00000620394 M0QYG6 137 aa16.35■□□□□ 0.21
SRRT-218ENST00000620394 P0C879 139 aa16.35■□□□□ 0.21
SRRT-218ENST00000620394 SMIM18P0DKX4 95 aa16.35■□□□□ 0.21
SRRT-218ENST00000620394 TBPP20226 339 aa16.35■□□□□ 0.21
SRRT-218ENST00000620394 LAMTOR1Q6IAA8 161 aa16.35■□□□□ 0.21
SRRT-218ENST00000620394 MZT2AQ6P582 158 aa16.35■□□□□ 0.21
SRRT-218ENST00000620394 WFDC3Q8IUB2 231 aa16.35■□□□□ 0.21
SRRT-218ENST00000620394 ARRDC1Q8N5I2 433 aa16.35■□□□□ 0.21
SRRT-218ENST00000620394 AP3S1Q92572 193 aa16.35■□□□□ 0.21
SRRT-218ENST00000620394 OR10C1Q96KK4 312 aa16.35■□□□□ 0.21
SRRT-218ENST00000620394 TXN2Q99757 166 aa16.35■□□□□ 0.21
SRRT-218ENST00000620394 C20orf24Q9BUV8 137 aa16.35■□□□□ 0.21
SRRT-218ENST00000620394 TP53TG1Q9Y2A0 90 aa16.35■□□□□ 0.21
SRRT-218ENST00000620394 HSPE1P61604 102 aaKnown RBP16.34■□□□□ 0.21
SRRT-218ENST00000620394 RELQ04864 619 aaPredicted RBP16.34■□□□□ 0.21
SRRT-218ENST00000620394 RNASE10Q5GAN6 216 aaKnown RBP16.34■□□□□ 0.21
SRRT-218ENST00000620394 NAA50Q9GZZ1 169 aaKnown RBP16.34■□□□□ 0.21
SRRT-218ENST00000620394 KLK11Q9UBX7 282 aa16.34■□□□□ 0.21
SRRT-218ENST00000620394 MTFP1Q9UDX5 166 aa16.34■□□□□ 0.21
SRRT-218ENST00000620394 IGHV3OR16-8A0A075B7F1 116 aa16.33■□□□□ 0.2
SRRT-218ENST00000620394 OR4C46A6NHA9 309 aa16.33■□□□□ 0.2
SRRT-218ENST00000620394 INS-IGF2F8WCM5 200 aa16.33■□□□□ 0.2
SRRT-218ENST00000620394 NUPL2O15504 423 aaKnown RBP16.33■□□□□ 0.2
SRRT-218ENST00000620394 APOC4P55056 127 aa16.33■□□□□ 0.2
SRRT-218ENST00000620394 Q6ZWC4 215 aa16.33■□□□□ 0.2
SRRT-218ENST00000620394 OR52I2Q8NH67 350 aa16.33■□□□□ 0.2
SRRT-218ENST00000620394 UBQLN2Q9UHD9 624 aa16.33■□□□□ 0.2
SRRT-218ENST00000620394 SMPXQ9UHP9 88 aa16.33■□□□□ 0.2
SRRT-218ENST00000620394 FAM25AB3EWG3 89 aa16.32■□□□□ 0.2
SRRT-218ENST00000620394 FAM25CB3EWG5 89 aa16.32■□□□□ 0.2
SRRT-218ENST00000620394 FAM25GB3EWG6 89 aa16.32■□□□□ 0.2
SRRT-218ENST00000620394 ZNF207O43670 478 aaKnown RBP16.32■□□□□ 0.2
SRRT-218ENST00000620394 MT-CO2P00403 227 aa16.32■□□□□ 0.2
SRRT-218ENST00000620394 IGKV1-5P01602 117 aa16.32■□□□□ 0.2
SRRT-218ENST00000620394 ZNF182P17025 639 aaPredicted RBP16.32■□□□□ 0.2
SRRT-218ENST00000620394 MFAP4P55083 255 aa16.32■□□□□ 0.2
SRRT-218ENST00000620394 PIGPP57054 158 aa16.32■□□□□ 0.2
SRRT-218ENST00000620394 MISP3Q96FF7 219 aa16.32■□□□□ 0.2
SRRT-218ENST00000620394 NXF2Q9GZY0 626 aaKnown RBP16.32■□□□□ 0.2
SRRT-218ENST00000620394 KMT2AQ03164 3969 aa16.31■□□□□ 0.2
SRRT-218ENST00000620394 KIR2DL5BA0A0G2JN68 375 aa16.31■□□□□ 0.2
SRRT-218ENST00000620394 KIR2DL5BA0A0G2JPC4 375 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms