RNA–Protein interactions for RNA: ENST00000616939.4

GPN1-212, Transcript of GPN-loop GTPase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GPN1, Length 1,832 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-212ENST00000616939 SPRY4Q9C004 299 aa12.78□□□□□ -0.36
GPN1-212ENST00000616939 SAP30LQ9HAJ7 183 aa12.78□□□□□ -0.36
GPN1-212ENST00000616939 ZNF257Q9Y2Q1 563 aa12.78□□□□□ -0.36
GPN1-212ENST00000616939 DOCK7Q96N67 2140 aa12.77□□□□□ -0.36
GPN1-212ENST00000616939 USP34Q70CQ2 3546 aa12.77□□□□□ -0.36
GPN1-212ENST00000616939 IGHV2OR16-5A0A0B4J2B6 119 aa12.77□□□□□ -0.37
GPN1-212ENST00000616939 IGHV3-64DA0A0J9YX35 117 aa12.77□□□□□ -0.37
GPN1-212ENST00000616939 IGHV1-2P23083 117 aa12.77□□□□□ -0.37
GPN1-212ENST00000616939 PRDX2P32119 198 aa12.77□□□□□ -0.37
GPN1-212ENST00000616939 RPL39P5Q59GN2 51 aa12.77□□□□□ -0.37
GPN1-212ENST00000616939 OR4A47Q6IF82 309 aa12.77□□□□□ -0.37
GPN1-212ENST00000616939 VKORC1L1Q8N0U8 176 aa12.77□□□□□ -0.37
GPN1-212ENST00000616939 DCTN5Q9BTE1 182 aa12.77□□□□□ -0.37
GPN1-212ENST00000616939 PLEKHA3Q9HB20 300 aa12.77□□□□□ -0.37
GPN1-212ENST00000616939 IDI2-AS1Q9NZ38 188 aa12.77□□□□□ -0.37
GPN1-212ENST00000616939 PRNDQ9UKY0 176 aa12.77□□□□□ -0.37
GPN1-212ENST00000616939 PPIAL4AQ9Y536 164 aa12.77□□□□□ -0.37
GPN1-212ENST00000616939 IGHV2-70DA0A0C4DH43 119 aa12.76□□□□□ -0.37
GPN1-212ENST00000616939 FAM181BA6NEQ2 426 aa12.76□□□□□ -0.37
GPN1-212ENST00000616939 CFIP05156 583 aa12.76□□□□□ -0.37
GPN1-212ENST00000616939 C8orf88P0DMB2 117 aa12.76□□□□□ -0.37
GPN1-212ENST00000616939 GNG10P50151 68 aa12.76□□□□□ -0.37
GPN1-212ENST00000616939 TCL1AP56279 114 aa12.76□□□□□ -0.37
GPN1-212ENST00000616939 ATP5L2Q7Z4Y8 100 aa12.76□□□□□ -0.37
GPN1-212ENST00000616939 CXorf67Q86X51 503 aaPredicted RBP12.76□□□□□ -0.37
GPN1-212ENST00000616939 GCSAMQ8N6F7 178 aa12.76□□□□□ -0.37
GPN1-212ENST00000616939 MDS2Q8NDY4 140 aa12.76□□□□□ -0.37
GPN1-212ENST00000616939 RNASE8Q8TDE3 154 aaKnown RBP12.76□□□□□ -0.37
GPN1-212ENST00000616939 CACNA1DQ01668 2161 aa12.76□□□□□ -0.37
GPN1-212ENST00000616939 SPINK4O60575 86 aa12.76□□□□□ -0.37
GPN1-212ENST00000616939 ACTL6BO94805 426 aa12.76□□□□□ -0.37
GPN1-212ENST00000616939 TFF1P04155 84 aa12.76□□□□□ -0.37
GPN1-212ENST00000616939 TNFSF4P23510 183 aa12.76□□□□□ -0.37
GPN1-212ENST00000616939 UBE2G1P62253 170 aa12.76□□□□□ -0.37
GPN1-212ENST00000616939 PRCDQ00LT1 54 aa12.76□□□□□ -0.37
GPN1-212ENST00000616939 SLAQ13239 276 aa12.76□□□□□ -0.37
GPN1-212ENST00000616939 C2orf83Q53S99 150 aa12.76□□□□□ -0.37
GPN1-212ENST00000616939 SPACA3Q8IXA5 215 aa12.76□□□□□ -0.37
GPN1-212ENST00000616939 OR4F17Q8NGA8 305 aa12.76□□□□□ -0.37
GPN1-212ENST00000616939 WNT10AQ9GZT5 417 aa12.76□□□□□ -0.37
GPN1-212ENST00000616939 DNAJC13O75165 2243 aa12.75□□□□□ -0.37
GPN1-212ENST00000616939 KLRC4-KLRK1H3BQV0 150 aa12.75□□□□□ -0.37
GPN1-212ENST00000616939 HSBP1O75506 76 aa12.75□□□□□ -0.37
GPN1-212ENST00000616939 NTF3P20783 257 aa12.75□□□□□ -0.37
GPN1-212ENST00000616939 VWA1Q6PCB0 445 aa12.75□□□□□ -0.37
GPN1-212ENST00000616939 FAM19A2Q8N3H0 131 aa12.75□□□□□ -0.37
GPN1-212ENST00000616939 LRRC29Q8WV35 223 aa12.75□□□□□ -0.37
GPN1-212ENST00000616939 TRAV30A0A087WSZ9 112 aa12.74□□□□□ -0.37
GPN1-212ENST00000616939 C2orf70A6NJV1 201 aa12.74□□□□□ -0.37
GPN1-212ENST00000616939 SRRM5B3KS81 715 aa12.74□□□□□ -0.37
GPN1-212ENST00000616939 TIMM8AO60220 97 aaPredicted RBP12.74□□□□□ -0.37
GPN1-212ENST00000616939 OR7C2O60412 319 aa12.74□□□□□ -0.37
GPN1-212ENST00000616939 IGKV3-15P01624 115 aa12.74□□□□□ -0.37
GPN1-212ENST00000616939 CGB3P0DN86 165 aa12.74□□□□□ -0.37
GPN1-212ENST00000616939 CGB7P0DN87 165 aa12.74□□□□□ -0.37
GPN1-212ENST00000616939 MGST1P10620 155 aaKnown RBP12.74□□□□□ -0.37
GPN1-212ENST00000616939 IGFBP4P22692 258 aa12.74□□□□□ -0.37
GPN1-212ENST00000616939 ACP1P24666 158 aa12.74□□□□□ -0.37
GPN1-212ENST00000616939 CFHR2P36980 270 aa12.74□□□□□ -0.37
GPN1-212ENST00000616939 HINT1P49773 126 aaPredicted RBP12.74□□□□□ -0.37
GPN1-212ENST00000616939 ARG2P78540 354 aa12.74□□□□□ -0.37
GPN1-212ENST00000616939 EDDM3AQ14507 147 aa12.74□□□□□ -0.37
GPN1-212ENST00000616939 LTC4SQ16873 150 aa12.74□□□□□ -0.37
GPN1-212ENST00000616939 UNQ5815/PRO19632Q6UWF5 114 aa12.74□□□□□ -0.37
GPN1-212ENST00000616939 C1orf162Q8NEQ5 155 aaPredicted RBP12.74□□□□□ -0.37
GPN1-212ENST00000616939 OR1L8Q8NGR8 309 aa12.74□□□□□ -0.37
GPN1-212ENST00000616939 ZNF714Q96N38 554 aa12.74□□□□□ -0.37
GPN1-212ENST00000616939 SLC25A33Q9BSK2 321 aa12.74□□□□□ -0.37
GPN1-212ENST00000616939 ALKBH7Q9BT30 221 aaPredicted RBP12.74□□□□□ -0.37
GPN1-212ENST00000616939 OR51B2Q9Y5P1 312 aa12.74□□□□□ -0.37
GPN1-212ENST00000616939 SPTBN5Q9NRC6 3674 aaKnown RBP12.74□□□□□ -0.37
GPN1-212ENST00000616939 A0A1W2PN81 502 aa12.74□□□□□ -0.37
GPN1-212ENST00000616939 C21orf140B9A014 251 aa12.74□□□□□ -0.37
GPN1-212ENST00000616939 REG1BP48304 166 aa12.74□□□□□ -0.37
GPN1-212ENST00000616939 ZNF134P52741 427 aa12.74□□□□□ -0.37
GPN1-212ENST00000616939 SLC35B1P78383 322 aa12.74□□□□□ -0.37
GPN1-212ENST00000616939 COTL1Q14019 142 aa12.74□□□□□ -0.37
GPN1-212ENST00000616939 TNXAQ16473 311 aa12.74□□□□□ -0.37
GPN1-212ENST00000616939 FBLN7Q53RD9 439 aa12.74□□□□□ -0.37
GPN1-212ENST00000616939 MBNL2Q5VZF2 373 aaKnown RBP12.74□□□□□ -0.37
GPN1-212ENST00000616939 EBLN2Q6P2I7 272 aa12.74□□□□□ -0.37
GPN1-212ENST00000616939 FAM234AQ9H0X4 552 aa12.74□□□□□ -0.37
GPN1-212ENST00000616939 GSX1Q9H4S2 264 aaPredicted RBP12.74□□□□□ -0.37
GPN1-212ENST00000616939 ST20Q9HBF5 79 aa12.74□□□□□ -0.37
GPN1-212ENST00000616939 TNFRSF19Q9NS68 423 aa12.74□□□□□ -0.37
GPN1-212ENST00000616939 SERTAD4Q9NUC0 356 aa12.74□□□□□ -0.37
GPN1-212ENST00000616939 CALYQ9NYX4 217 aa12.74□□□□□ -0.37
GPN1-212ENST00000616939 DSCAML1Q8TD84 2053 aa12.73□□□□□ -0.37
GPN1-212ENST00000616939 IGKV1D-17A0A075B6S4 117 aa12.73□□□□□ -0.37
GPN1-212ENST00000616939 LOC105371242A0A075B767 164 aa12.73□□□□□ -0.37
GPN1-212ENST00000616939 PSMB11A5LHX3 300 aa12.73□□□□□ -0.37
GPN1-212ENST00000616939 AHRRA9YTQ3 701 aa12.73□□□□□ -0.37
GPN1-212ENST00000616939 M0R2Z0 102 aa12.73□□□□□ -0.37
GPN1-212ENST00000616939 UPK2O00526 184 aa12.73□□□□□ -0.37
GPN1-212ENST00000616939 LRRC10Q5BKY1 277 aa12.73□□□□□ -0.37
GPN1-212ENST00000616939 SMIM12Q96EX1 92 aa12.73□□□□□ -0.37
GPN1-212ENST00000616939 FAM167A-AS1Q96KT0 104 aa12.73□□□□□ -0.37
GPN1-212ENST00000616939 TRIB1Q96RU8 372 aa12.73□□□□□ -0.37
GPN1-212ENST00000616939 SPRR3Q9UBC9 169 aa12.73□□□□□ -0.37
GPN1-212ENST00000616939 SIT1Q9Y3P8 196 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms