RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 SLC25A46Q96AG3 418 aa13.2□□□□□ -0.3
SSBP1-215ENST00000612337 FUNDC2Q9BWH2 189 aa13.2□□□□□ -0.3
SSBP1-215ENST00000612337 UBQLN2Q9UHD9 624 aa13.2□□□□□ -0.3
SSBP1-215ENST00000612337 PRNDQ9UKY0 176 aa13.2□□□□□ -0.3
SSBP1-215ENST00000612337 A0A0J9YWU9 116 aa13.19□□□□□ -0.3
SSBP1-215ENST00000612337 K7EIM0 57 aa13.19□□□□□ -0.3
SSBP1-215ENST00000612337 K7EMT4 169 aa13.19□□□□□ -0.3
SSBP1-215ENST00000612337 GPR31O00270 319 aa13.19□□□□□ -0.3
SSBP1-215ENST00000612337 SPRY2O43597 315 aa13.19□□□□□ -0.3
SSBP1-215ENST00000612337 BMI1P35226 326 aa13.19□□□□□ -0.3
SSBP1-215ENST00000612337 ADMP35318 185 aa13.19□□□□□ -0.3
SSBP1-215ENST00000612337 TNFRSF9Q07011 255 aa13.19□□□□□ -0.3
SSBP1-215ENST00000612337 ODF3L2Q3SX64 289 aa13.19□□□□□ -0.3
SSBP1-215ENST00000612337 OR6F1Q8NGZ6 308 aa13.19□□□□□ -0.3
SSBP1-215ENST00000612337 OR5B3Q8NH48 314 aa13.19□□□□□ -0.3
SSBP1-215ENST00000612337 LINC00476Q8WZB0 136 aa13.19□□□□□ -0.3
SSBP1-215ENST00000612337 TMEM56Q96MV1 263 aa13.19□□□□□ -0.3
SSBP1-215ENST00000612337 C20orf24Q9BUV8 137 aa13.19□□□□□ -0.3
SSBP1-215ENST00000612337 FKBP11Q9NYL4 201 aa13.19□□□□□ -0.3
SSBP1-215ENST00000612337 DNAH10Q8IVF4 4471 aa13.18□□□□□ -0.3
SSBP1-215ENST00000612337 KIR2DL5BA0A0G2JN68 375 aa13.18□□□□□ -0.3
SSBP1-215ENST00000612337 KIR2DL5BA0A0G2JPC4 375 aa13.18□□□□□ -0.3
SSBP1-215ENST00000612337 OR4C46A6NHA9 309 aa13.18□□□□□ -0.3
SSBP1-215ENST00000612337 PRSS3P35030 304 aa13.18□□□□□ -0.3
SSBP1-215ENST00000612337 DEFB135Q30KP9 77 aa13.18□□□□□ -0.3
SSBP1-215ENST00000612337 LYG2Q86SG7 212 aa13.18□□□□□ -0.3
SSBP1-215ENST00000612337 KIR2DL5AQ8N109 375 aa13.18□□□□□ -0.3
SSBP1-215ENST00000612337 UBAC2Q8NBM4 344 aa13.18□□□□□ -0.3
SSBP1-215ENST00000612337 KIR2DL5BQ8NHK3 375 aa13.18□□□□□ -0.3
SSBP1-215ENST00000612337 TSC22D3Q99576 134 aa13.18□□□□□ -0.3
SSBP1-215ENST00000612337 TMEM14BQ9NUH8 114 aa13.18□□□□□ -0.3
SSBP1-215ENST00000612337 CXorf65A6NEN9 183 aa13.17□□□□□ -0.3
SSBP1-215ENST00000612337 DBX1A6NMT0 343 aa13.17□□□□□ -0.3
SSBP1-215ENST00000612337 C15orf61A6NNL5 157 aa13.17□□□□□ -0.3
SSBP1-215ENST00000612337 C15orf62A8K5M9 175 aa13.17□□□□□ -0.3
SSBP1-215ENST00000612337 HRH1P35367 487 aa13.17□□□□□ -0.3
SSBP1-215ENST00000612337 NCS1P62166 190 aa13.17□□□□□ -0.3
SSBP1-215ENST00000612337 EWSR1Q01844 656 aaKnown RBP eCLIP13.17□□□□□ -0.3
SSBP1-215ENST00000612337 PMS2P11Q13670 270 aa13.17□□□□□ -0.3
SSBP1-215ENST00000612337 Q56UQ5 140 aa13.17□□□□□ -0.3
SSBP1-215ENST00000612337 LYSMD2Q8IV50 215 aa13.17□□□□□ -0.3
SSBP1-215ENST00000612337 STPG3Q8N7X2 389 aa13.17□□□□□ -0.3
SSBP1-215ENST00000612337 OR1P1Q8NH06 330 aa13.17□□□□□ -0.3
SSBP1-215ENST00000612337 FAM212BQ9NTI7 297 aaPredicted RBP13.17□□□□□ -0.3
SSBP1-215ENST00000612337 IGHV3OR16-8A0A075B7F1 116 aa13.16□□□□□ -0.3
SSBP1-215ENST00000612337 NUPR2A6NF83 97 aa13.16□□□□□ -0.3
SSBP1-215ENST00000612337 ZNF207O43670 478 aaKnown RBP13.16□□□□□ -0.3
SSBP1-215ENST00000612337 CTSDP07339 412 aaPredicted RBP13.16□□□□□ -0.3
SSBP1-215ENST00000612337 CTSGP08311 255 aa13.16□□□□□ -0.3
SSBP1-215ENST00000612337 ATF4P18848 351 aaPredicted RBP13.16□□□□□ -0.3
SSBP1-215ENST00000612337 VBP1P61758 197 aa13.16□□□□□ -0.3
SSBP1-215ENST00000612337 RNF183Q96D59 192 aa13.16□□□□□ -0.3
SSBP1-215ENST00000612337 HLA-DMAP28067 261 aa13.15□□□□□ -0.3
SSBP1-215ENST00000612337 S100GP29377 79 aa13.15□□□□□ -0.3
SSBP1-215ENST00000612337 FCGR2BP31994 310 aaPredicted RBP13.15□□□□□ -0.3
SSBP1-215ENST00000612337 RELQ04864 619 aaPredicted RBP13.15□□□□□ -0.3
SSBP1-215ENST00000612337 PHLDA2Q53GA4 152 aa13.15□□□□□ -0.3
SSBP1-215ENST00000612337 LPCAT3Q6P1A2 487 aa13.15□□□□□ -0.3
SSBP1-215ENST00000612337 GPX8Q8TED1 209 aa13.15□□□□□ -0.3
SSBP1-215ENST00000612337 GALNT14Q96FL9 552 aa13.15□□□□□ -0.3
SSBP1-215ENST00000612337 ZNF414Q96IQ9 312 aa13.15□□□□□ -0.3
SSBP1-215ENST00000612337 COMMD3Q9UBI1 195 aa13.15□□□□□ -0.3
SSBP1-215ENST00000612337 SMPXQ9UHP9 88 aa13.15□□□□□ -0.3
SSBP1-215ENST00000612337 I3L2K1 104 aa13.14□□□□□ -0.31
SSBP1-215ENST00000612337 NUPL2O15504 423 aaKnown RBP13.14□□□□□ -0.31
SSBP1-215ENST00000612337 APOA1P02647 267 aa13.14□□□□□ -0.31
SSBP1-215ENST00000612337 EIF4EP06730 217 aaKnown RBP13.14□□□□□ -0.31
SSBP1-215ENST00000612337 SMIM18P0DKX4 95 aa13.14□□□□□ -0.31
SSBP1-215ENST00000612337 RPL35AP18077 110 aaKnown RBP13.14□□□□□ -0.31
SSBP1-215ENST00000612337 TSPAN5P62079 268 aa13.14□□□□□ -0.31
SSBP1-215ENST00000612337 ZNF114Q8NC26 417 aa13.14□□□□□ -0.31
SSBP1-215ENST00000612337 SEC22AQ96IW7 307 aa13.14□□□□□ -0.31
SSBP1-215ENST00000612337 OR10C1Q96KK4 312 aa13.14□□□□□ -0.31
SSBP1-215ENST00000612337 CMTM3Q96MX0 182 aa13.14□□□□□ -0.31
SSBP1-215ENST00000612337 RNF2Q99496 336 aa13.14□□□□□ -0.31
SSBP1-215ENST00000612337 TXN2Q99757 166 aa13.14□□□□□ -0.31
SSBP1-215ENST00000612337 MAP6D1Q9H9H5 199 aa13.14□□□□□ -0.31
SSBP1-215ENST00000612337 VPS13DQ5THJ4 4388 aa13.14□□□□□ -0.31
SSBP1-215ENST00000612337 IGHV7-4-1A0A0J9YVY3 117 aa13.13□□□□□ -0.31
SSBP1-215ENST00000612337 CHEK1O14757 476 aa13.13□□□□□ -0.31
SSBP1-215ENST00000612337 LY6G6CO95867 125 aa13.13□□□□□ -0.31
SSBP1-215ENST00000612337 MFAP4P55083 255 aa13.13□□□□□ -0.31
SSBP1-215ENST00000612337 CEMP1Q6PRD7 247 aaPredicted RBP13.13□□□□□ -0.31
SSBP1-215ENST00000612337 TBC1D26Q86UD7 250 aa13.13□□□□□ -0.31
SSBP1-215ENST00000612337 OR4A16Q8NH70 328 aa13.13□□□□□ -0.31
SSBP1-215ENST00000612337 RHPN1-AS1Q9BWJ2 59 aa13.13□□□□□ -0.31
SSBP1-215ENST00000612337 C6orf62Q9GZU0 229 aaPredicted RBP13.13□□□□□ -0.31
SSBP1-215ENST00000612337 SCPEP1Q9HB40 452 aa13.13□□□□□ -0.31
SSBP1-215ENST00000612337 SMIM31A0A1B0GVY4 71 aa13.12□□□□□ -0.31
SSBP1-215ENST00000612337 IGKV1-39P01597 117 aa13.12□□□□□ -0.31
SSBP1-215ENST00000612337 IGKV1D-39P04432 117 aa13.12□□□□□ -0.31
SSBP1-215ENST00000612337 RORCP51449 518 aa13.12□□□□□ -0.31
SSBP1-215ENST00000612337 PRCDQ00LT1 54 aa13.12□□□□□ -0.31
SSBP1-215ENST00000612337 CTF1Q16619 201 aa13.12□□□□□ -0.31
SSBP1-215ENST00000612337 H2BFWTQ7Z2G1 175 aa13.12□□□□□ -0.31
SSBP1-215ENST00000612337 TMEM217Q8N7C4 229 aa13.12□□□□□ -0.31
SSBP1-215ENST00000612337 TMEM116Q8NCL8 245 aa13.12□□□□□ -0.31
SSBP1-215ENST00000612337 MISP3Q96FF7 219 aa13.12□□□□□ -0.31
SSBP1-215ENST00000612337 NXF2Q9GZY0 626 aaKnown RBP13.12□□□□□ -0.31
SSBP1-215ENST00000612337 YIF1AO95070 293 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms