RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 OR1L8Q8NGR8 309 aa13.72□□□□□ -0.21
SHKBP1-216ENST00000598201 ZFP92A6NM28 416 aa13.71□□□□□ -0.21
SHKBP1-216ENST00000598201 MBP02144 154 aa13.71□□□□□ -0.21
SHKBP1-216ENST00000598201 ZFP36P26651 326 aaKnown RBP13.71□□□□□ -0.21
SHKBP1-216ENST00000598201 FLI1Q01543 452 aaPredicted RBP13.71□□□□□ -0.21
SHKBP1-216ENST00000598201 KLRD1Q13241 179 aa13.71□□□□□ -0.21
SHKBP1-216ENST00000598201 GGTLC1Q9BX51 225 aa13.71□□□□□ -0.21
SHKBP1-216ENST00000598201 MPDU1O75352 247 aa13.71□□□□□ -0.21
SHKBP1-216ENST00000598201 YIF1AO95070 293 aa13.71□□□□□ -0.21
SHKBP1-216ENST00000598201 LGALS7P47929 136 aa13.71□□□□□ -0.21
SHKBP1-216ENST00000598201 VMA21Q3ZAQ7 101 aa13.71□□□□□ -0.21
SHKBP1-216ENST00000598201 C2orf83Q53S99 150 aa13.71□□□□□ -0.21
SHKBP1-216ENST00000598201 HCP5Q6MZN7 132 aa13.71□□□□□ -0.21
SHKBP1-216ENST00000598201 RPEQ96AT9 228 aa13.71□□□□□ -0.21
SHKBP1-216ENST00000598201 NPVFQ9HCQ7 196 aa13.71□□□□□ -0.21
SHKBP1-216ENST00000598201 ASH1LQ9NR48 2969 aaKnown RBP13.7□□□□□ -0.22
SHKBP1-216ENST00000598201 PLXNB1O43157 2135 aa13.7□□□□□ -0.22
SHKBP1-216ENST00000598201 CTXND1A0A1B0GTU2 59 aa13.7□□□□□ -0.22
SHKBP1-216ENST00000598201 M0R1W7 72 aa13.7□□□□□ -0.22
SHKBP1-216ENST00000598201 HSPB1P04792 205 aaKnown RBP13.7□□□□□ -0.22
SHKBP1-216ENST00000598201 KHDC3LQ587J8 217 aa13.7□□□□□ -0.22
SHKBP1-216ENST00000598201 MIC13Q5XKP0 118 aa13.7□□□□□ -0.22
SHKBP1-216ENST00000598201 CYB561D1Q8N8Q1 229 aa13.7□□□□□ -0.22
SHKBP1-216ENST00000598201 RAB24Q969Q5 203 aa13.7□□□□□ -0.22
SHKBP1-216ENST00000598201 TMPRSS5Q9H3S3 457 aa13.7□□□□□ -0.22
SHKBP1-216ENST00000598201 AMMECR1Q9Y4X0 333 aaPredicted RBP13.7□□□□□ -0.22
SHKBP1-216ENST00000598201 A0A1W2PPI3 338 aa13.7□□□□□ -0.22
SHKBP1-216ENST00000598201 OVOL3O00110 214 aa13.7□□□□□ -0.22
SHKBP1-216ENST00000598201 BCL2P10415 239 aa13.7□□□□□ -0.22
SHKBP1-216ENST00000598201 OPRK1P41145 380 aa13.7□□□□□ -0.22
SHKBP1-216ENST00000598201 WT1-ASQ06250 92 aa13.7□□□□□ -0.22
SHKBP1-216ENST00000598201 MLANAQ16655 118 aa13.7□□□□□ -0.22
SHKBP1-216ENST00000598201 AKIRIN2Q53H80 203 aa13.7□□□□□ -0.22
SHKBP1-216ENST00000598201 SOHLH1Q5JUK2 328 aa13.7□□□□□ -0.22
SHKBP1-216ENST00000598201 OR11H6Q8NGC7 330 aa13.7□□□□□ -0.22
SHKBP1-216ENST00000598201 IGFBPL1Q8WX77 278 aa13.7□□□□□ -0.22
SHKBP1-216ENST00000598201 ACTR3CQ9C0K3 210 aaPredicted RBP13.7□□□□□ -0.22
SHKBP1-216ENST00000598201 FBN2P35556 2912 aa13.69□□□□□ -0.22
SHKBP1-216ENST00000598201 MED13LQ71F56 2210 aa13.69□□□□□ -0.22
SHKBP1-216ENST00000598201 CRYGBP07316 175 aa13.69□□□□□ -0.22
SHKBP1-216ENST00000598201 CEBPGP53567 150 aa13.69□□□□□ -0.22
SHKBP1-216ENST00000598201 KRTAP10-9P60411 292 aa13.69□□□□□ -0.22
SHKBP1-216ENST00000598201 ACOT6Q3I5F7 207 aaPredicted RBP13.69□□□□□ -0.22
SHKBP1-216ENST00000598201 SSMEM1Q8WWF3 244 aa13.69□□□□□ -0.22
SHKBP1-216ENST00000598201 C20orf24Q9BUV8 137 aa13.69□□□□□ -0.22
SHKBP1-216ENST00000598201 PXMP4Q9Y6I8 212 aa13.69□□□□□ -0.22
SHKBP1-216ENST00000598201 INS-IGF2F8WCM5 200 aa13.68□□□□□ -0.22
SHKBP1-216ENST00000598201 IGHV2-5P01817 119 aa13.68□□□□□ -0.22
SHKBP1-216ENST00000598201 PRTN3P24158 256 aa13.68□□□□□ -0.22
SHKBP1-216ENST00000598201 PAX6P26367 422 aa13.68□□□□□ -0.22
SHKBP1-216ENST00000598201 AKR1C3P42330 323 aa13.68□□□□□ -0.22
SHKBP1-216ENST00000598201 PSG5Q15238 335 aa13.68□□□□□ -0.22
SHKBP1-216ENST00000598201 TPTE2P1Q5T6R2 138 aa13.68□□□□□ -0.22
SHKBP1-216ENST00000598201 TEPPQ6URK8 271 aa13.68□□□□□ -0.22
SHKBP1-216ENST00000598201 AWAT1Q58HT5 328 aa13.68□□□□□ -0.22
SHKBP1-216ENST00000598201 LHFPL4Q7Z7J7 247 aa13.68□□□□□ -0.22
SHKBP1-216ENST00000598201 TEX45Q8NA69 505 aa13.68□□□□□ -0.22
SHKBP1-216ENST00000598201 NAV3Q8IVL0 2385 aa13.67□□□□□ -0.22
SHKBP1-216ENST00000598201 A0A1W2PRD5 423 aa13.67□□□□□ -0.22
SHKBP1-216ENST00000598201 A0A1W2PRF3 423 aa13.67□□□□□ -0.22
SHKBP1-216ENST00000598201 A0A1W2PRM7 423 aa13.67□□□□□ -0.22
SHKBP1-216ENST00000598201 TIMM23O14925 209 aa13.67□□□□□ -0.22
SHKBP1-216ENST00000598201 CYB5BO43169 146 aa13.67□□□□□ -0.22
SHKBP1-216ENST00000598201 HTR1DP28221 377 aa13.67□□□□□ -0.22
SHKBP1-216ENST00000598201 CDC34P49427 236 aaPredicted RBP13.67□□□□□ -0.22
SHKBP1-216ENST00000598201 ERHP84090 104 aaKnown RBP13.67□□□□□ -0.22
SHKBP1-216ENST00000598201 PRSS8Q16651 343 aa13.67□□□□□ -0.22
SHKBP1-216ENST00000598201 BPESC1Q9GZL8 116 aa13.67□□□□□ -0.22
SHKBP1-216ENST00000598201 IGKV1OR2-108A0A075B7D4 117 aa13.67□□□□□ -0.22
SHKBP1-216ENST00000598201 A0A1W2PN81 502 aa13.67□□□□□ -0.22
SHKBP1-216ENST00000598201 ODF3BA8MYP8 253 aa13.67□□□□□ -0.22
SHKBP1-216ENST00000598201 SEC14L6B5MCN3 397 aa13.67□□□□□ -0.22
SHKBP1-216ENST00000598201 FNDC10F2Z333 226 aa13.67□□□□□ -0.22
SHKBP1-216ENST00000598201 CHRNA7P36544 502 aa13.67□□□□□ -0.22
SHKBP1-216ENST00000598201 ATP5IP56385 69 aaPredicted RBP13.67□□□□□ -0.22
SHKBP1-216ENST00000598201 LCN2P80188 198 aa13.67□□□□□ -0.22
SHKBP1-216ENST00000598201 GAMTQ14353 236 aa13.67□□□□□ -0.22
SHKBP1-216ENST00000598201 GATAD1Q8WUU5 269 aa13.67□□□□□ -0.22
SHKBP1-216ENST00000598201 NRGNQ92686 78 aa13.67□□□□□ -0.22
SHKBP1-216ENST00000598201 DPM3Q9P2X0 92 aa13.67□□□□□ -0.22
SHKBP1-216ENST00000598201 SIGLEC9Q9Y336 463 aa13.67□□□□□ -0.22
SHKBP1-216ENST00000598201 HILPDAQ9Y5L2 63 aa13.67□□□□□ -0.22
SHKBP1-216ENST00000598201 PUS1Q9Y606 427 aaKnown RBP eCLIP13.67□□□□□ -0.22
SHKBP1-216ENST00000598201 UNC79Q9P2D8 2635 aa13.66□□□□□ -0.22
SHKBP1-216ENST00000598201 M0R036 132 aa13.66□□□□□ -0.22
SHKBP1-216ENST00000598201 IGHV4-39P01824 125 aa13.66□□□□□ -0.22
SHKBP1-216ENST00000598201 SNRNP70P08621 437 aaKnown RBP13.66□□□□□ -0.22
SHKBP1-216ENST00000598201 PAX2Q02962 417 aa13.66□□□□□ -0.22
SHKBP1-216ENST00000598201 PMS2P11Q13670 270 aa13.66□□□□□ -0.22
SHKBP1-216ENST00000598201 VMO1Q7Z5L0 202 aa13.66□□□□□ -0.22
SHKBP1-216ENST00000598201 C7orf77A4D0Y5 90 aa13.65□□□□□ -0.22
SHKBP1-216ENST00000598201 REG1AP05451 166 aa13.65□□□□□ -0.22
SHKBP1-216ENST00000598201 STPG3Q8N7X2 389 aa13.65□□□□□ -0.22
SHKBP1-216ENST00000598201 P2RX4Q99571 388 aa13.65□□□□□ -0.22
SHKBP1-216ENST00000598201 RPS10P5Q9NQ39 176 aa13.65□□□□□ -0.22
SHKBP1-216ENST00000598201 METTL1Q9UBP6 276 aaKnown RBP13.65□□□□□ -0.22
SHKBP1-216ENST00000598201 VAX2Q9UIW0 290 aa13.65□□□□□ -0.22
SHKBP1-216ENST00000598201 LMO4P61968 165 aa13.65□□□□□ -0.22
SHKBP1-216ENST00000598201 CD69Q07108 199 aa13.65□□□□□ -0.22
SHKBP1-216ENST00000598201 TNXAQ16473 311 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms