RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 RAB2AP61019 212 aa10.63□□□□□ -0.71
VRK3-205ENST00000593919 RELBQ01201 579 aa10.63□□□□□ -0.71
VRK3-205ENST00000593919 TAF15Q92804 592 aaKnown RBP eCLIP10.63□□□□□ -0.71
VRK3-205ENST00000593919 PSMG3Q9BT73 122 aaPredicted RBP10.63□□□□□ -0.71
VRK3-205ENST00000593919 RPRMQ9NS64 109 aa10.63□□□□□ -0.71
VRK3-205ENST00000593919 HIF1ANQ9NWT6 349 aa10.63□□□□□ -0.71
VRK3-205ENST00000593919 CENPVL3A0A0U1RRI6 287 aa10.63□□□□□ -0.71
VRK3-205ENST00000593919 PCP4L1A6NKN8 68 aa10.63□□□□□ -0.71
VRK3-205ENST00000593919 OR8U8P0C7N1 319 aa10.63□□□□□ -0.71
VRK3-205ENST00000593919 SSX2Q16385 188 aa10.63□□□□□ -0.71
VRK3-205ENST00000593919 MINOS1Q5TGZ0 78 aa10.63□□□□□ -0.71
VRK3-205ENST00000593919 DYNAPQ8N1N2 210 aa10.63□□□□□ -0.71
VRK3-205ENST00000593919 LINC01356Q8N9X3 169 aa10.63□□□□□ -0.71
VRK3-205ENST00000593919 OR4A16Q8NH70 328 aa10.63□□□□□ -0.71
VRK3-205ENST00000593919 RXFP4Q8TDU9 374 aa10.63□□□□□ -0.71
VRK3-205ENST00000593919 RITA1Q96K30 269 aa10.63□□□□□ -0.71
VRK3-205ENST00000593919 CIB3Q96Q77 187 aaPredicted RBP10.63□□□□□ -0.71
VRK3-205ENST00000593919 MINOS1-NBL1R4GNA1 71 aa10.63□□□□□ -0.71
VRK3-205ENST00000593919 NOTCH2Q04721 2471 aa10.62□□□□□ -0.71
VRK3-205ENST00000593919 IFNA17P01571 189 aa10.62□□□□□ -0.71
VRK3-205ENST00000593919 SAA4P35542 130 aa10.62□□□□□ -0.71
VRK3-205ENST00000593919 ICAM4Q14773 271 aa10.62□□□□□ -0.71
VRK3-205ENST00000593919 AARDQ4LEZ3 155 aa10.62□□□□□ -0.71
VRK3-205ENST00000593919 LCN15Q6UWW0 184 aa10.62□□□□□ -0.71
VRK3-205ENST00000593919 TMEM147Q9BVK8 224 aa10.62□□□□□ -0.71
VRK3-205ENST00000593919 PARD6GQ9BYG4 376 aaPredicted RBP10.62□□□□□ -0.71
VRK3-205ENST00000593919 TBL2Q9Y4P3 447 aaKnown RBP10.62□□□□□ -0.71
VRK3-205ENST00000593919 NAV3Q8IVL0 2385 aa10.62□□□□□ -0.71
VRK3-205ENST00000593919 TRAV20A0A0B4J274 112 aa10.61□□□□□ -0.71
VRK3-205ENST00000593919 TRAV40A0A0B4J280 105 aa10.61□□□□□ -0.71
VRK3-205ENST00000593919 C15orf61A6NNL5 157 aa10.61□□□□□ -0.71
VRK3-205ENST00000593919 SCAF4O95104 1147 aaKnown RBP10.61□□□□□ -0.71
VRK3-205ENST00000593919 IGLV2-23P01705 113 aa10.61□□□□□ -0.71
VRK3-205ENST00000593919 IL6RP08887 468 aaPredicted RBP10.61□□□□□ -0.71
VRK3-205ENST00000593919 FBP1P09467 338 aa10.61□□□□□ -0.71
VRK3-205ENST00000593919 FGF8P55075 233 aaPredicted RBP10.61□□□□□ -0.71
VRK3-205ENST00000593919 ZNF726P1Q15940 193 aa10.61□□□□□ -0.71
VRK3-205ENST00000593919 SOHLH1Q5JUK2 328 aa10.61□□□□□ -0.71
VRK3-205ENST00000593919 SSX7Q7RTT5 188 aa10.61□□□□□ -0.71
VRK3-205ENST00000593919 OR10P1Q8NGE3 313 aa10.61□□□□□ -0.71
VRK3-205ENST00000593919 CFHR4Q92496 578 aa10.61□□□□□ -0.71
VRK3-205ENST00000593919 CLCC1Q96S66 551 aa10.61□□□□□ -0.71
VRK3-205ENST00000593919 C7orf69Q9H7B7 122 aa10.61□□□□□ -0.71
VRK3-205ENST00000593919 SMCO4Q9NRQ5 59 aa10.61□□□□□ -0.71
VRK3-205ENST00000593919 BET1LQ9NYM9 111 aa10.61□□□□□ -0.71
VRK3-205ENST00000593919 GNG13Q9P2W3 67 aa10.61□□□□□ -0.71
VRK3-205ENST00000593919 MYO9AB2RTY4 2548 aa10.61□□□□□ -0.71
VRK3-205ENST00000593919 C7orf77A4D0Y5 90 aa10.61□□□□□ -0.71
VRK3-205ENST00000593919 PMS2P5A8MQ11 134 aa10.61□□□□□ -0.71
VRK3-205ENST00000593919 EIF3GO75821 320 aaKnown RBP eCLIP10.61□□□□□ -0.71
VRK3-205ENST00000593919 KBTBD11O94819 623 aa10.61□□□□□ -0.71
VRK3-205ENST00000593919 VENTXO95231 258 aa10.61□□□□□ -0.71
VRK3-205ENST00000593919 SRP19P09132 144 aaKnown RBP10.61□□□□□ -0.71
VRK3-205ENST00000593919 FGF7P21781 194 aa10.61□□□□□ -0.71
VRK3-205ENST00000593919 GATA3P23771 443 aa10.61□□□□□ -0.71
VRK3-205ENST00000593919 SERF2P84101 59 aa10.61□□□□□ -0.71
VRK3-205ENST00000593919 HABP2Q14520 560 aaPredicted RBP10.61□□□□□ -0.71
VRK3-205ENST00000593919 TMEM41BQ5BJD5 291 aa10.61□□□□□ -0.71
VRK3-205ENST00000593919 ZNF506Q5JVG8 444 aa10.61□□□□□ -0.71
VRK3-205ENST00000593919 PIP4P2Q8N4L2 257 aa10.61□□□□□ -0.71
VRK3-205ENST00000593919 AJUBAQ96IF1 538 aa10.61□□□□□ -0.71
VRK3-205ENST00000593919 SMDT1Q9H4I9 107 aa10.61□□□□□ -0.71
VRK3-205ENST00000593919 TMEM14BQ9NUH8 114 aa10.61□□□□□ -0.71
VRK3-205ENST00000593919 PUS1Q9Y606 427 aaKnown RBP eCLIP10.61□□□□□ -0.71
VRK3-205ENST00000593919 IGHV3OR16-10A0A075B7F0 116 aa10.6□□□□□ -0.71
VRK3-205ENST00000593919 OOSP1A8MZH6 123 aa10.6□□□□□ -0.71
VRK3-205ENST00000593919 NPFFO15130 113 aa10.6□□□□□ -0.71
VRK3-205ENST00000593919 ATP6V1FQ16864 119 aa10.6□□□□□ -0.71
VRK3-205ENST00000593919 TMEM249Q2WGJ8 235 aa10.6□□□□□ -0.71
VRK3-205ENST00000593919 CCDC144NLQ6NUI1 221 aa10.6□□□□□ -0.71
VRK3-205ENST00000593919 ZNF429Q86V71 674 aa10.6□□□□□ -0.71
VRK3-205ENST00000593919 WFDC11Q8NEX6 87 aa10.6□□□□□ -0.71
VRK3-205ENST00000593919 PINX1Q96BK5 328 aaKnown RBP10.6□□□□□ -0.71
VRK3-205ENST00000593919 RCC1LQ96I51 464 aaKnown RBP10.6□□□□□ -0.71
VRK3-205ENST00000593919 MLXQ9UH92 298 aa10.6□□□□□ -0.71
VRK3-205ENST00000593919 FOXA2Q9Y261 457 aaPredicted RBP10.6□□□□□ -0.71
VRK3-205ENST00000593919 TRAV1-1A0A0B4J248 108 aa10.59□□□□□ -0.71
VRK3-205ENST00000593919 ZFP92A6NM28 416 aa10.59□□□□□ -0.71
VRK3-205ENST00000593919 C15orf62A8K5M9 175 aa10.59□□□□□ -0.71
VRK3-205ENST00000593919 UPK2O00526 184 aa10.59□□□□□ -0.71
VRK3-205ENST00000593919 SLC25A17O43808 307 aa10.59□□□□□ -0.71
VRK3-205ENST00000593919 IGHV4-31P0DP07 118 aa10.59□□□□□ -0.71
VRK3-205ENST00000593919 CNTFRP26992 372 aa10.59□□□□□ -0.71
VRK3-205ENST00000593919 CD1BP29016 333 aa10.59□□□□□ -0.71
VRK3-205ENST00000593919 LGALS7P47929 136 aa10.59□□□□□ -0.71
VRK3-205ENST00000593919 RUSC1-AS1Q66K80 236 aa10.59□□□□□ -0.71
VRK3-205ENST00000593919 MALSU1Q96EH3 234 aa10.59□□□□□ -0.71
VRK3-205ENST00000593919 MXRA5Q9NR99 2828 aa10.59□□□□□ -0.71
VRK3-205ENST00000593919 IGHV1-69DA0A0B4J2H0 117 aa10.59□□□□□ -0.71
VRK3-205ENST00000593919 LOC102723971A0A1B0GUV8 181 aa10.59□□□□□ -0.71
VRK3-205ENST00000593919 TGFAP01135 160 aa10.59□□□□□ -0.71
VRK3-205ENST00000593919 AVPP01185 164 aa10.59□□□□□ -0.71
VRK3-205ENST00000593919 IGKV1D-33P01593 117 aa10.59□□□□□ -0.71
VRK3-205ENST00000593919 IGKV1-33P01594 117 aa10.59□□□□□ -0.71
VRK3-205ENST00000593919 IGHV1-69P01742 117 aa10.59□□□□□ -0.71
VRK3-205ENST00000593919 HSPB1P04792 205 aaKnown RBP10.59□□□□□ -0.71
VRK3-205ENST00000593919 IGHV4-38-2P0DP08 117 aa10.59□□□□□ -0.71
VRK3-205ENST00000593919 MYOD1P15172 320 aa10.59□□□□□ -0.71
VRK3-205ENST00000593919 CD24P25063 80 aa10.59□□□□□ -0.71
VRK3-205ENST00000593919 ACSM6Q6P461 480 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms