RNA–Protein interactions for RNA: ENST00000582370.1

PDLIM1P3-201, Transcript of PDZ and LIM domain 1 pseudogene 3, humanhuman

BASIC

Gene PDLIM1P3, Length 599 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P3-201ENST00000582370 NUP62P37198 522 aaPredicted RBP6.87□□□□□ -1.31
PDLIM1P3-201ENST00000582370 SNCAP37840 140 aa6.87□□□□□ -1.31
PDLIM1P3-201ENST00000582370 HTR2BP41595 481 aa6.87□□□□□ -1.31
PDLIM1P3-201ENST00000582370 RPL27AP46776 148 aaKnown RBP6.87□□□□□ -1.31
PDLIM1P3-201ENST00000582370 CRIP2P52943 208 aaPredicted RBP6.87□□□□□ -1.31
PDLIM1P3-201ENST00000582370 LINC00205P59089 165 aa6.87□□□□□ -1.31
PDLIM1P3-201ENST00000582370 RPL23AP62750 156 aaKnown RBP6.87□□□□□ -1.31
PDLIM1P3-201ENST00000582370 SLC35B1P78383 322 aa6.87□□□□□ -1.31
PDLIM1P3-201ENST00000582370 HNF4GQ14541 408 aa6.87□□□□□ -1.31
PDLIM1P3-201ENST00000582370 FXYD3Q14802 87 aa6.87□□□□□ -1.31
PDLIM1P3-201ENST00000582370 SSX9Q7RTT3 188 aa6.87□□□□□ -1.31
PDLIM1P3-201ENST00000582370 COMMD1Q8N668 190 aa6.87□□□□□ -1.31
PDLIM1P3-201ENST00000582370 OR4D5Q8NGN0 318 aa6.87□□□□□ -1.31
PDLIM1P3-201ENST00000582370 ARPC1AQ92747 370 aa6.87□□□□□ -1.31
PDLIM1P3-201ENST00000582370 FBXL15Q9H469 300 aa6.87□□□□□ -1.31
PDLIM1P3-201ENST00000582370 NDUFA4L2Q9NRX3 87 aa6.87□□□□□ -1.31
PDLIM1P3-201ENST00000582370 GSKIPQ9P0R6 139 aa6.87□□□□□ -1.31
PDLIM1P3-201ENST00000582370 NSG2Q9Y328 171 aa6.87□□□□□ -1.31
PDLIM1P3-201ENST00000582370 L7N2F9 121 aa6.86□□□□□ -1.31
PDLIM1P3-201ENST00000582370 TSC22D2O75157 780 aa6.86□□□□□ -1.31
PDLIM1P3-201ENST00000582370 SCGB2A1O75556 95 aa6.86□□□□□ -1.31
PDLIM1P3-201ENST00000582370 CCNKO75909 580 aa6.86□□□□□ -1.31
PDLIM1P3-201ENST00000582370 CA2P00918 260 aa6.86□□□□□ -1.31
PDLIM1P3-201ENST00000582370 PF4P02776 101 aa6.86□□□□□ -1.31
PDLIM1P3-201ENST00000582370 HIST1H1BP16401 226 aaKnown RBP6.86□□□□□ -1.31
PDLIM1P3-201ENST00000582370 C4BPBP20851 252 aa6.86□□□□□ -1.31
PDLIM1P3-201ENST00000582370 H2BFSP57053 126 aa6.86□□□□□ -1.31
PDLIM1P3-201ENST00000582370 OR2B8PP59922 312 aa6.86□□□□□ -1.31
PDLIM1P3-201ENST00000582370 RAB11AP62491 216 aa6.86□□□□□ -1.31
PDLIM1P3-201ENST00000582370 VAMP2P63027 116 aa6.86□□□□□ -1.31
PDLIM1P3-201ENST00000582370 FCN2Q15485 313 aa6.86□□□□□ -1.31
PDLIM1P3-201ENST00000582370 TNXAQ16473 311 aa6.86□□□□□ -1.31
PDLIM1P3-201ENST00000582370 SLC35E3Q7Z769 313 aa6.86□□□□□ -1.31
PDLIM1P3-201ENST00000582370 TCTE3Q8IZS6 198 aa6.86□□□□□ -1.31
PDLIM1P3-201ENST00000582370 VKORC1L1Q8N0U8 176 aa6.86□□□□□ -1.31
PDLIM1P3-201ENST00000582370 Q8N2B8 174 aa6.86□□□□□ -1.31
PDLIM1P3-201ENST00000582370 ZNF114Q8NC26 417 aa6.86□□□□□ -1.31
PDLIM1P3-201ENST00000582370 WIPF2Q8TF74 440 aaPredicted RBP6.86□□□□□ -1.31
PDLIM1P3-201ENST00000582370 SRSF12Q8WXF0 261 aaKnown RBP6.86□□□□□ -1.31
PDLIM1P3-201ENST00000582370 SMIM8Q96KF7 97 aa6.86□□□□□ -1.31
PDLIM1P3-201ENST00000582370 OR10C1Q96KK4 312 aa6.86□□□□□ -1.31
PDLIM1P3-201ENST00000582370 SLC25A31Q9H0C2 315 aa6.86□□□□□ -1.31
PDLIM1P3-201ENST00000582370 SERTAD4Q9NUC0 356 aa6.86□□□□□ -1.31
PDLIM1P3-201ENST00000582370 GAR1Q9NY12 217 aaKnown RBP6.86□□□□□ -1.31
PDLIM1P3-201ENST00000582370 FRAS1Q86XX4 4008 aa6.85□□□□□ -1.31
PDLIM1P3-201ENST00000582370 TEX50A0A1B0GTY4 177 aa6.85□□□□□ -1.31
PDLIM1P3-201ENST00000582370 NPIPB5A8MRT5 1133 aa6.85□□□□□ -1.31
PDLIM1P3-201ENST00000582370 CEBPZOSA8MTT3 80 aa6.85□□□□□ -1.31
PDLIM1P3-201ENST00000582370 PFDN1O60925 122 aa6.85□□□□□ -1.31
PDLIM1P3-201ENST00000582370 OR9G9P0C7N8 305 aa6.85□□□□□ -1.31
PDLIM1P3-201ENST00000582370 CD24P25063 80 aa6.85□□□□□ -1.31
PDLIM1P3-201ENST00000582370 HOXD3P31249 432 aaPredicted RBP6.85□□□□□ -1.31
PDLIM1P3-201ENST00000582370 P2RY1P47900 373 aa6.85□□□□□ -1.31
PDLIM1P3-201ENST00000582370 HOXA1P49639 335 aaPredicted RBP6.85□□□□□ -1.31
PDLIM1P3-201ENST00000582370 HBG1P69891 147 aa6.85□□□□□ -1.31
PDLIM1P3-201ENST00000582370 HBG2P69892 147 aa6.85□□□□□ -1.31
PDLIM1P3-201ENST00000582370 CX3CL1P78423 397 aa6.85□□□□□ -1.31
PDLIM1P3-201ENST00000582370 BAXQ07812 192 aa6.85□□□□□ -1.31
PDLIM1P3-201ENST00000582370 IL15RAQ13261 267 aa6.85□□□□□ -1.31
PDLIM1P3-201ENST00000582370 LY6EQ16553 131 aa6.85□□□□□ -1.31
PDLIM1P3-201ENST00000582370 ARSJQ5FYB0 599 aaPredicted RBP6.85□□□□□ -1.31
PDLIM1P3-201ENST00000582370 ETFRF1Q6IPR1 90 aa6.85□□□□□ -1.31
PDLIM1P3-201ENST00000582370 OR11H7Q8NGC8 314 aa6.85□□□□□ -1.31
PDLIM1P3-201ENST00000582370 DTD1Q8TEA8 209 aa6.85□□□□□ -1.31
PDLIM1P3-201ENST00000582370 PPP1R1CQ8WVI7 109 aa6.85□□□□□ -1.31
PDLIM1P3-201ENST00000582370 HYLS1Q96M11 299 aa6.85□□□□□ -1.31
PDLIM1P3-201ENST00000582370 ATP6V0BQ99437 205 aa6.85□□□□□ -1.31
PDLIM1P3-201ENST00000582370 SLA2Q9H6Q3 261 aa6.85□□□□□ -1.31
PDLIM1P3-201ENST00000582370 HEYLQ9NQ87 328 aaPredicted RBP6.85□□□□□ -1.31
PDLIM1P3-201ENST00000582370 ZMAT5Q9UDW3 170 aaKnown RBP6.85□□□□□ -1.31
PDLIM1P3-201ENST00000582370 IGHV7-81A0A0B4J1V7 117 aa6.84□□□□□ -1.31
PDLIM1P3-201ENST00000582370 RPS10-NUDT3A0A1W2PQS6 291 aa6.84□□□□□ -1.31
PDLIM1P3-201ENST00000582370 HMSDA8MTL9 139 aa6.84□□□□□ -1.31
PDLIM1P3-201ENST00000582370 DEDDO75618 318 aa6.84□□□□□ -1.31
PDLIM1P3-201ENST00000582370 MPC2O95563 127 aa6.84□□□□□ -1.31
PDLIM1P3-201ENST00000582370 CRYGCP07315 174 aa6.84□□□□□ -1.31
PDLIM1P3-201ENST00000582370 SLC25A4P12235 298 aa6.84□□□□□ -1.31
PDLIM1P3-201ENST00000582370 LYL1P12980 280 aa6.84□□□□□ -1.31
PDLIM1P3-201ENST00000582370 CXCL3P19876 107 aa6.84□□□□□ -1.31
PDLIM1P3-201ENST00000582370 EXOSC2Q13868 293 aaKnown RBP6.84□□□□□ -1.31
PDLIM1P3-201ENST00000582370 PRSS54Q6PEW0 395 aa6.84□□□□□ -1.31
PDLIM1P3-201ENST00000582370 TMEM65Q6PI78 240 aa6.84□□□□□ -1.31
PDLIM1P3-201ENST00000582370 Q6ZRM9 215 aa6.84□□□□□ -1.31
PDLIM1P3-201ENST00000582370 TMEM219Q86XT9 240 aa6.84□□□□□ -1.31
PDLIM1P3-201ENST00000582370 STX12Q86Y82 276 aa6.84□□□□□ -1.31
PDLIM1P3-201ENST00000582370 TTC9CQ8N5M4 171 aa6.84□□□□□ -1.31
PDLIM1P3-201ENST00000582370 INO80EQ8NBZ0 244 aaPredicted RBP6.84□□□□□ -1.31
PDLIM1P3-201ENST00000582370 OR2T35Q8NGX2 323 aa6.84□□□□□ -1.31
PDLIM1P3-201ENST00000582370 OR1P1Q8NH06 330 aa6.84□□□□□ -1.31
PDLIM1P3-201ENST00000582370 RNASEH2CQ8TDP1 164 aaKnown RBP6.84□□□□□ -1.31
PDLIM1P3-201ENST00000582370 ABHD5Q8WTS1 349 aa6.84□□□□□ -1.31
PDLIM1P3-201ENST00000582370 PINX1Q96BK5 328 aaKnown RBP6.84□□□□□ -1.31
PDLIM1P3-201ENST00000582370 RITA1Q96K30 269 aa6.84□□□□□ -1.31
PDLIM1P3-201ENST00000582370 GGACTQ9BVM4 153 aa6.84□□□□□ -1.31
PDLIM1P3-201ENST00000582370 WNT10AQ9GZT5 417 aa6.84□□□□□ -1.31
PDLIM1P3-201ENST00000582370 ZNF702PQ9H963 129 aa6.84□□□□□ -1.31
PDLIM1P3-201ENST00000582370 PRR13Q9NZ81 148 aa6.84□□□□□ -1.31
PDLIM1P3-201ENST00000582370 STRAPQ9Y3F4 350 aaKnown RBP6.84□□□□□ -1.31
PDLIM1P3-201ENST00000582370 TRAV41A0A0B4J266 112 aa6.83□□□□□ -1.32
PDLIM1P3-201ENST00000582370 A0A0G2JLM5 398 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms