RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 SCARB1Q8WTV0 552 aa10.84□□□□□ -0.67
SMARCE1-216ENST00000580419 SEC22AQ96IW7 307 aa10.84□□□□□ -0.67
SMARCE1-216ENST00000580419 FUNDC2Q9BWH2 189 aa10.84□□□□□ -0.67
SMARCE1-216ENST00000580419 GGTLC1Q9BX51 225 aa10.84□□□□□ -0.67
SMARCE1-216ENST00000580419 LOC102724200A0A096LPH7 203 aaPredicted RBP10.83□□□□□ -0.68
SMARCE1-216ENST00000580419 KIR2DL5BA0A0G2JN68 375 aa10.83□□□□□ -0.68
SMARCE1-216ENST00000580419 KIR2DL5BA0A0G2JPC4 375 aa10.83□□□□□ -0.68
SMARCE1-216ENST00000580419 F8W735 103 aaPredicted RBP10.83□□□□□ -0.68
SMARCE1-216ENST00000580419 K7EIM0 57 aa10.83□□□□□ -0.68
SMARCE1-216ENST00000580419 B3GALNT1O75752 331 aa10.83□□□□□ -0.68
SMARCE1-216ENST00000580419 IGHV3-23P01764 117 aa10.83□□□□□ -0.68
SMARCE1-216ENST00000580419 EIF4EP06730 217 aaKnown RBP10.83□□□□□ -0.68
SMARCE1-216ENST00000580419 TGFBR1P36897 503 aa10.83□□□□□ -0.68
SMARCE1-216ENST00000580419 RORCP51449 518 aa10.83□□□□□ -0.68
SMARCE1-216ENST00000580419 TSPAN5P62079 268 aa10.83□□□□□ -0.68
SMARCE1-216ENST00000580419 SLC25A24Q6NUK1 477 aa10.83□□□□□ -0.68
SMARCE1-216ENST00000580419 BTNL8Q6UX41 500 aa10.83□□□□□ -0.68
SMARCE1-216ENST00000580419 KIR2DL5AQ8N109 375 aa10.83□□□□□ -0.68
SMARCE1-216ENST00000580419 ARRDC1Q8N5I2 433 aa10.83□□□□□ -0.68
SMARCE1-216ENST00000580419 KIR2DL5BQ8NHK3 375 aa10.83□□□□□ -0.68
SMARCE1-216ENST00000580419 CACNG8Q8WXS5 425 aa10.83□□□□□ -0.68
SMARCE1-216ENST00000580419 AP3S1Q92572 193 aa10.83□□□□□ -0.68
SMARCE1-216ENST00000580419 OR10C1Q96KK4 312 aa10.83□□□□□ -0.68
SMARCE1-216ENST00000580419 CTSGP08311 255 aa10.82□□□□□ -0.68
SMARCE1-216ENST00000580419 EDN2P20800 178 aa10.82□□□□□ -0.68
SMARCE1-216ENST00000580419 HLA-DMAP28067 261 aa10.82□□□□□ -0.68
SMARCE1-216ENST00000580419 G6PCP35575 357 aa10.82□□□□□ -0.68
SMARCE1-216ENST00000580419 MFAP2P55001 183 aa10.82□□□□□ -0.68
SMARCE1-216ENST00000580419 CMC4P56277 68 aaPredicted RBP10.82□□□□□ -0.68
SMARCE1-216ENST00000580419 PRCDQ00LT1 54 aa10.82□□□□□ -0.68
SMARCE1-216ENST00000580419 RELQ04864 619 aaPredicted RBP10.82□□□□□ -0.68
SMARCE1-216ENST00000580419 MZT2AQ6P582 158 aa10.82□□□□□ -0.68
SMARCE1-216ENST00000580419 LHFPL1Q86WI0 220 aa10.82□□□□□ -0.68
SMARCE1-216ENST00000580419 ATG12O94817 140 aa10.81□□□□□ -0.68
SMARCE1-216ENST00000580419 FCER2P06734 321 aa10.81□□□□□ -0.68
SMARCE1-216ENST00000580419 ADMP35318 185 aa10.81□□□□□ -0.68
SMARCE1-216ENST00000580419 APOC4P55056 127 aa10.81□□□□□ -0.68
SMARCE1-216ENST00000580419 HSPE1P61604 102 aaKnown RBP10.81□□□□□ -0.68
SMARCE1-216ENST00000580419 LSM3P62310 102 aaKnown RBP10.81□□□□□ -0.68
SMARCE1-216ENST00000580419 SSBP1Q04837 148 aaKnown RBP10.81□□□□□ -0.68
SMARCE1-216ENST00000580419 PVRIGQ6DKI7 326 aa10.81□□□□□ -0.68
SMARCE1-216ENST00000580419 H2BFWTQ7Z2G1 175 aa10.81□□□□□ -0.68
SMARCE1-216ENST00000580419 TBC1D26Q86UD7 250 aa10.81□□□□□ -0.68
SMARCE1-216ENST00000580419 COMMD3Q9UBI1 195 aa10.81□□□□□ -0.68
SMARCE1-216ENST00000580419 S4R3C0 116 aa10.81□□□□□ -0.68
SMARCE1-216ENST00000580419 PLECQ15149 4684 aaKnown RBP10.81□□□□□ -0.68
SMARCE1-216ENST00000580419 OR2T8A6NH00 312 aa10.8□□□□□ -0.68
SMARCE1-216ENST00000580419 OR4C46A6NHA9 309 aa10.8□□□□□ -0.68
SMARCE1-216ENST00000580419 I3L2K1 104 aa10.8□□□□□ -0.68
SMARCE1-216ENST00000580419 NUPL2O15504 423 aaKnown RBP10.8□□□□□ -0.68
SMARCE1-216ENST00000580419 JTBO76095 146 aa10.8□□□□□ -0.68
SMARCE1-216ENST00000580419 GABARAPO95166 117 aa10.8□□□□□ -0.68
SMARCE1-216ENST00000580419 ELK1P19419 428 aa10.8□□□□□ -0.68
SMARCE1-216ENST00000580419 MFAP4P55083 255 aa10.8□□□□□ -0.68
SMARCE1-216ENST00000580419 NCS1P62166 190 aa10.8□□□□□ -0.68
SMARCE1-216ENST00000580419 ZFAND6Q6FIF0 208 aa10.8□□□□□ -0.68
SMARCE1-216ENST00000580419 CHRDL1Q9BU40 450 aa10.8□□□□□ -0.68
SMARCE1-216ENST00000580419 WFDC10AQ9H1F0 79 aa10.8□□□□□ -0.68
SMARCE1-216ENST00000580419 MTFP1Q9UDX5 166 aa10.8□□□□□ -0.68
SMARCE1-216ENST00000580419 SCAF4O95104 1147 aaKnown RBP10.79□□□□□ -0.68
SMARCE1-216ENST00000580419 IGKV1-39P01597 117 aa10.79□□□□□ -0.68
SMARCE1-216ENST00000580419 IGKV1D-39P04432 117 aa10.79□□□□□ -0.68
SMARCE1-216ENST00000580419 P0C879 139 aa10.79□□□□□ -0.68
SMARCE1-216ENST00000580419 ZNF182P17025 639 aaPredicted RBP10.79□□□□□ -0.68
SMARCE1-216ENST00000580419 BMI1P35226 326 aa10.79□□□□□ -0.68
SMARCE1-216ENST00000580419 VBP1P61758 197 aa10.79□□□□□ -0.68
SMARCE1-216ENST00000580419 MRPS10P82664 201 aaKnown RBP10.79□□□□□ -0.68
SMARCE1-216ENST00000580419 ERHP84090 104 aaKnown RBP10.79□□□□□ -0.68
SMARCE1-216ENST00000580419 TNFRSF9Q07011 255 aa10.79□□□□□ -0.68
SMARCE1-216ENST00000580419 CTF1Q16619 201 aa10.79□□□□□ -0.68
SMARCE1-216ENST00000580419 PHLDA2Q53GA4 152 aa10.79□□□□□ -0.68
SMARCE1-216ENST00000580419 OR4A16Q8NH70 328 aa10.79□□□□□ -0.68
SMARCE1-216ENST00000580419 OVOL2Q9BRP0 275 aa10.79□□□□□ -0.68
SMARCE1-216ENST00000580419 NXF2Q9GZY0 626 aaKnown RBP10.79□□□□□ -0.68
SMARCE1-216ENST00000580419 RABL2AQ9UBK7 228 aaPredicted RBP10.79□□□□□ -0.68
SMARCE1-216ENST00000580419 SMPXQ9UHP9 88 aa10.79□□□□□ -0.68
SMARCE1-216ENST00000580419 RABL2BQ9UNT1 228 aa10.79□□□□□ -0.68
SMARCE1-216ENST00000580419 DBX1A6NMT0 343 aa10.78□□□□□ -0.68
SMARCE1-216ENST00000580419 CORTO00230 105 aa10.78□□□□□ -0.68
SMARCE1-216ENST00000580419 CD74P04233 296 aa10.78□□□□□ -0.68
SMARCE1-216ENST00000580419 AARDQ4LEZ3 155 aa10.78□□□□□ -0.68
SMARCE1-216ENST00000580419 RNASE10Q5GAN6 216 aaKnown RBP10.78□□□□□ -0.68
SMARCE1-216ENST00000580419 SNX29P2Q8IUI4 249 aa10.78□□□□□ -0.68
SMARCE1-216ENST00000580419 HINT2Q9BX68 163 aa10.78□□□□□ -0.68
SMARCE1-216ENST00000580419 NSG2Q9Y328 171 aa10.78□□□□□ -0.68
SMARCE1-216ENST00000580419 HPGDSO60760 199 aa10.77□□□□□ -0.69
SMARCE1-216ENST00000580419 ODF3L2Q3SX64 289 aa10.77□□□□□ -0.69
SMARCE1-216ENST00000580419 TERB2Q8NHR7 220 aa10.77□□□□□ -0.69
SMARCE1-216ENST00000580419 ZFAND1Q8TCF1 268 aa10.77□□□□□ -0.69
SMARCE1-216ENST00000580419 GALNT14Q96FL9 552 aa10.77□□□□□ -0.69
SMARCE1-216ENST00000580419 ZNF414Q96IQ9 312 aa10.77□□□□□ -0.69
SMARCE1-216ENST00000580419 RETNQ9HD89 108 aa10.77□□□□□ -0.69
SMARCE1-216ENST00000580419 CACFD1Q9UGQ2 172 aa10.77□□□□□ -0.69
SMARCE1-216ENST00000580419 TRAV2A0A0B4J234 112 aa10.76□□□□□ -0.69
SMARCE1-216ENST00000580419 IGHV7-4-1A0A0J9YVY3 117 aa10.76□□□□□ -0.69
SMARCE1-216ENST00000580419 RPL5P46777 297 aaKnown RBP10.76□□□□□ -0.69
SMARCE1-216ENST00000580419 NPBWR1P48145 328 aa10.76□□□□□ -0.69
SMARCE1-216ENST00000580419 Q56UQ5 140 aa10.76□□□□□ -0.69
SMARCE1-216ENST00000580419 FAM90A2PQ658T7 463 aa10.76□□□□□ -0.69
SMARCE1-216ENST00000580419 FAM219AQ8IW50 185 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms