RNA–Protein interactions for RNA: ENST00000578067.5

LIMD2-203, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 2,019 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-203ENST00000578067 MAS1LP35410 378 aa22.24■■□□□ 1.15
LIMD2-203ENST00000578067 CEBPGP53567 150 aa22.24■■□□□ 1.15
LIMD2-203ENST00000578067 CD69Q07108 199 aa22.24■■□□□ 1.15
LIMD2-203ENST00000578067 SSMEM1Q8WWF3 244 aa22.24■■□□□ 1.15
LIMD2-203ENST00000578067 IGFBPL1Q8WX77 278 aa22.24■■□□□ 1.15
LIMD2-203ENST00000578067 BPESC1Q9GZL8 116 aa22.24■■□□□ 1.15
LIMD2-203ENST00000578067 DEFA4P12838 97 aa22.23■■□□□ 1.15
LIMD2-203ENST00000578067 RPL29P47914 159 aaKnown RBP22.23■■□□□ 1.15
LIMD2-203ENST00000578067 SUB1P53999 127 aaKnown RBP eCLIP22.23■■□□□ 1.15
LIMD2-203ENST00000578067 AWAT1Q58HT5 328 aa22.23■■□□□ 1.15
LIMD2-203ENST00000578067 VMO1Q7Z5L0 202 aa22.23■■□□□ 1.15
LIMD2-203ENST00000578067 P2RX4Q99571 388 aa22.23■■□□□ 1.15
LIMD2-203ENST00000578067 TMPRSS5Q9H3S3 457 aa22.23■■□□□ 1.15
LIMD2-203ENST00000578067 METTL1Q9UBP6 276 aaKnown RBP22.23■■□□□ 1.15
LIMD2-203ENST00000578067 A0A1W2PPV4 95 aa22.23■■□□□ 1.15
LIMD2-203ENST00000578067 M0R036 132 aa22.23■■□□□ 1.15
LIMD2-203ENST00000578067 ACTL6BO94805 426 aa22.23■■□□□ 1.15
LIMD2-203ENST00000578067 IGHV4-39P01824 125 aa22.23■■□□□ 1.15
LIMD2-203ENST00000578067 B2MP61769 119 aa22.23■■□□□ 1.15
LIMD2-203ENST00000578067 LCN2P80188 198 aa22.23■■□□□ 1.15
LIMD2-203ENST00000578067 GAMTQ14353 236 aa22.23■■□□□ 1.15
LIMD2-203ENST00000578067 CACNG8Q8WXS5 425 aa22.23■■□□□ 1.15
LIMD2-203ENST00000578067 BBC3Q96PG8 261 aaPredicted RBP22.23■■□□□ 1.15
LIMD2-203ENST00000578067 HILPDAQ9Y5L2 63 aa22.23■■□□□ 1.15
LIMD2-203ENST00000578067 RNF224P0DH78 156 aa22.22■■□□□ 1.15
LIMD2-203ENST00000578067 GPX4P36969 197 aaPredicted RBP22.22■■□□□ 1.15
LIMD2-203ENST00000578067 PAX2Q02962 417 aa22.22■■□□□ 1.15
LIMD2-203ENST00000578067 TNXAQ16473 311 aa22.22■■□□□ 1.15
LIMD2-203ENST00000578067 AKIRIN2Q53H80 203 aa22.22■■□□□ 1.15
LIMD2-203ENST00000578067 PPP1R27Q86WC6 154 aa22.22■■□□□ 1.15
LIMD2-203ENST00000578067 ARHGAP32A7KAX9 2087 aa22.21■■□□□ 1.15
LIMD2-203ENST00000578067 VENTXO95231 258 aa22.21■■□□□ 1.15
LIMD2-203ENST00000578067 RPL27AP46776 148 aaKnown RBP22.21■■□□□ 1.15
LIMD2-203ENST00000578067 LMO4P61968 165 aa22.21■■□□□ 1.15
LIMD2-203ENST00000578067 MLANAQ16655 118 aa22.21■■□□□ 1.15
LIMD2-203ENST00000578067 LHFPL4Q7Z7J7 247 aa22.21■■□□□ 1.15
LIMD2-203ENST00000578067 MRPL41Q8IXM3 137 aaKnown RBP22.21■■□□□ 1.15
LIMD2-203ENST00000578067 STPG3Q8N7X2 389 aa22.21■■□□□ 1.15
LIMD2-203ENST00000578067 PUS1Q9Y606 427 aaKnown RBP eCLIP22.21■■□□□ 1.15
LIMD2-203ENST00000578067 RNASEH2CQ8TDP1 164 aaKnown RBP22.21■■□□□ 1.15
LIMD2-203ENST00000578067 RPS10P5Q9NQ39 176 aa22.21■■□□□ 1.15
LIMD2-203ENST00000578067 KLF2Q9Y5W3 355 aaPredicted RBP22.21■■□□□ 1.15
LIMD2-203ENST00000578067 CACNA1BQ00975 2339 aa22.2■■□□□ 1.14
LIMD2-203ENST00000578067 SNRNP70P08621 437 aaKnown RBP22.2■■□□□ 1.14
LIMD2-203ENST00000578067 TAGLN2P37802 199 aaKnown RBP22.2■■□□□ 1.14
LIMD2-203ENST00000578067 PDLIM4P50479 330 aa22.2■■□□□ 1.14
LIMD2-203ENST00000578067 SLC35E3Q7Z769 313 aa22.2■■□□□ 1.14
LIMD2-203ENST00000578067 CFHR4Q92496 578 aa22.2■■□□□ 1.14
LIMD2-203ENST00000578067 C20orf24Q9BUV8 137 aa22.2■■□□□ 1.14
LIMD2-203ENST00000578067 SIRPDQ9H106 197 aa22.2■■□□□ 1.14
LIMD2-203ENST00000578067 MANBALQ9NQG1 85 aa22.2■■□□□ 1.14
LIMD2-203ENST00000578067 USP24Q9UPU5 2620 aa22.2■■□□□ 1.14
LIMD2-203ENST00000578067 IGHV2-70DA0A0C4DH43 119 aa22.19■■□□□ 1.14
LIMD2-203ENST00000578067 C7orf77A4D0Y5 90 aa22.19■■□□□ 1.14
LIMD2-203ENST00000578067 PSMB3P49720 205 aa22.19■■□□□ 1.14
LIMD2-203ENST00000578067 COMPP49747 757 aaPredicted RBP22.19■■□□□ 1.14
LIMD2-203ENST00000578067 PRR20EP86478 221 aa22.19■■□□□ 1.14
LIMD2-203ENST00000578067 PRR20CP86479 221 aa22.19■■□□□ 1.14
LIMD2-203ENST00000578067 PRR20DP86480 221 aa22.19■■□□□ 1.14
LIMD2-203ENST00000578067 PRR20BP86481 221 aa22.19■■□□□ 1.14
LIMD2-203ENST00000578067 PRR20AP86496 221 aa22.19■■□□□ 1.14
LIMD2-203ENST00000578067 TMEM249Q2WGJ8 235 aa22.19■■□□□ 1.14
LIMD2-203ENST00000578067 SLC16A13Q7RTY0 426 aa22.19■■□□□ 1.14
LIMD2-203ENST00000578067 SPOCK3Q9BQ16 436 aa22.19■■□□□ 1.14
LIMD2-203ENST00000578067 FBXL15Q9H469 300 aa22.19■■□□□ 1.14
LIMD2-203ENST00000578067 A0A1W2PRD5 423 aa22.19■■□□□ 1.14
LIMD2-203ENST00000578067 A0A1W2PRF3 423 aa22.19■■□□□ 1.14
LIMD2-203ENST00000578067 A0A1W2PRM7 423 aa22.19■■□□□ 1.14
LIMD2-203ENST00000578067 IGLC7A0M8Q6 106 aa22.19■■□□□ 1.14
LIMD2-203ENST00000578067 H3BQ15 152 aa22.19■■□□□ 1.14
LIMD2-203ENST00000578067 HABP2Q14520 560 aaPredicted RBP22.19■■□□□ 1.14
LIMD2-203ENST00000578067 CCL19Q99731 98 aa22.19■■□□□ 1.14
LIMD2-203ENST00000578067 SLC45A2Q9UMX9 530 aa22.19■■□□□ 1.14
LIMD2-203ENST00000578067 HOXB4P17483 251 aaPredicted RBP22.18■■□□□ 1.14
LIMD2-203ENST00000578067 IQCF2Q8IXL9 164 aa22.18■■□□□ 1.14
LIMD2-203ENST00000578067 SLC35E1Q96K37 410 aa22.18■■□□□ 1.14
LIMD2-203ENST00000578067 IGKV1OR2-108A0A075B7D4 117 aa22.18■■□□□ 1.14
LIMD2-203ENST00000578067 MEF2BQ02080 365 aaPredicted RBP22.18■■□□□ 1.14
LIMD2-203ENST00000578067 RHEBQ15382 184 aa22.18■■□□□ 1.14
LIMD2-203ENST00000578067 LINC00869P0C866 280 aa22.17■■□□□ 1.14
LIMD2-203ENST00000578067 GNB1P62873 340 aa22.17■■□□□ 1.14
LIMD2-203ENST00000578067 SMCO4Q9NRQ5 59 aa22.17■■□□□ 1.14
LIMD2-203ENST00000578067 REG1AP05451 166 aa22.16■■□□□ 1.14
LIMD2-203ENST00000578067 AKR1C3P42330 323 aa22.16■■□□□ 1.14
LIMD2-203ENST00000578067 FAM90A2PQ658T7 463 aa22.16■■□□□ 1.14
LIMD2-203ENST00000578067 NIPSNAP3BQ9BS92 247 aa22.16■■□□□ 1.14
LIMD2-203ENST00000578067 MINOS1Q5TGZ0 78 aa22.16■■□□□ 1.14
LIMD2-203ENST00000578067 OR2T6Q8NHC8 308 aa22.16■■□□□ 1.14
LIMD2-203ENST00000578067 MINOS1-NBL1R4GNA1 71 aa22.16■■□□□ 1.14
LIMD2-203ENST00000578067 OR10J1P30954 320 aa22.15■■□□□ 1.14
LIMD2-203ENST00000578067 CD81P60033 236 aa22.15■■□□□ 1.14
LIMD2-203ENST00000578067 PLGLAQ15195 96 aa22.15■■□□□ 1.14
LIMD2-203ENST00000578067 CCDC144NLQ6NUI1 221 aa22.15■■□□□ 1.14
LIMD2-203ENST00000578067 ZNF114Q8NC26 417 aa22.15■■□□□ 1.14
LIMD2-203ENST00000578067 GATAD1Q8WUU5 269 aa22.15■■□□□ 1.14
LIMD2-203ENST00000578067 OOSP1A8MZH6 123 aa22.14■■□□□ 1.14
LIMD2-203ENST00000578067 MOSP00540 346 aa22.14■■□□□ 1.14
LIMD2-203ENST00000578067 STAG3L2P0CL84 134 aa22.14■■□□□ 1.14
LIMD2-203ENST00000578067 STAG3L3P0CL85 134 aa22.14■■□□□ 1.14
LIMD2-203ENST00000578067 MMDQ15546 238 aa22.14■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms