RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 PMCHP20382 165 aa8.84□□□□□ -0.99
CCDC40-207ENST00000572253 TCL1AP56279 114 aa8.84□□□□□ -0.99
CCDC40-207ENST00000572253 C1orf159Q96HA4 380 aa8.84□□□□□ -0.99
CCDC40-207ENST00000572253 OR2V2Q96R30 315 aa8.84□□□□□ -0.99
CCDC40-207ENST00000572253 NCOR1P1Q9H4R4 102 aa8.84□□□□□ -0.99
CCDC40-207ENST00000572253 KBTBD11-OT1A0A1B0GTJ5 212 aa8.84□□□□□ -0.99
CCDC40-207ENST00000572253 LINC00869P0C866 280 aa8.84□□□□□ -0.99
CCDC40-207ENST00000572253 CT45A1Q5HYN5 189 aa8.84□□□□□ -0.99
CCDC40-207ENST00000572253 HES3Q5TGS1 186 aa8.84□□□□□ -0.99
CCDC40-207ENST00000572253 CT45A3Q8NHU0 189 aa8.84□□□□□ -0.99
CCDC40-207ENST00000572253 KCNS1Q96KK3 526 aa8.84□□□□□ -0.99
CCDC40-207ENST00000572253 SLC35D1Q9NTN3 355 aa8.84□□□□□ -0.99
CCDC40-207ENST00000572253 ZNF257Q9Y2Q1 563 aa8.84□□□□□ -0.99
CCDC40-207ENST00000572253 TBL2Q9Y4P3 447 aaKnown RBP8.84□□□□□ -0.99
CCDC40-207ENST00000572253 DLEU1O43261 78 aa8.84□□□□□ -0.99
CCDC40-207ENST00000572253 LINC00310P59036 64 aa8.84□□□□□ -0.99
CCDC40-207ENST00000572253 GUSBP1Q15486 140 aa8.84□□□□□ -0.99
CCDC40-207ENST00000572253 IBA57Q5T440 356 aaKnown RBP8.84□□□□□ -0.99
CCDC40-207ENST00000572253 A0A1W2PRE2 83 aa8.83□□□□□ -1
CCDC40-207ENST00000572253 KLF3P57682 345 aaPredicted RBP8.83□□□□□ -1
CCDC40-207ENST00000572253 PRCDQ00LT1 54 aa8.83□□□□□ -1
CCDC40-207ENST00000572253 FXYD3Q14802 87 aa8.83□□□□□ -1
CCDC40-207ENST00000572253 POU2AF1Q16633 256 aa8.83□□□□□ -1
CCDC40-207ENST00000572253 COL5A1-AS1Q5SY13 56 aa8.83□□□□□ -1
CCDC40-207ENST00000572253 MRPL54Q6P161 138 aaKnown RBP8.83□□□□□ -1
CCDC40-207ENST00000572253 BORCS7Q96B45 105 aa8.83□□□□□ -1
CCDC40-207ENST00000572253 AP1S3Q96PC3 154 aa8.83□□□□□ -1
CCDC40-207ENST00000572253 RNASE7Q9H1E1 156 aaKnown RBP8.83□□□□□ -1
CCDC40-207ENST00000572253 SPRY3O43610 288 aa8.83□□□□□ -1
CCDC40-207ENST00000572253 C8orf88P0DMB2 117 aa8.83□□□□□ -1
CCDC40-207ENST00000572253 CCL11P51671 97 aa8.83□□□□□ -1
CCDC40-207ENST00000572253 SELENOVP59797 346 aa8.83□□□□□ -1
CCDC40-207ENST00000572253 NRN1Q9NPD7 142 aa8.83□□□□□ -1
CCDC40-207ENST00000572253 HEATR1Q9H583 2144 aaKnown RBP8.83□□□□□ -1
CCDC40-207ENST00000572253 UPK2O00526 184 aa8.83□□□□□ -1
CCDC40-207ENST00000572253 CD59P13987 128 aa8.83□□□□□ -1
CCDC40-207ENST00000572253 GNG10P50151 68 aa8.83□□□□□ -1
CCDC40-207ENST00000572253 KIAA1644Q3SXP7 199 aa8.83□□□□□ -1
CCDC40-207ENST00000572253 TMEM136Q6ZRR5 245 aa8.83□□□□□ -1
CCDC40-207ENST00000572253 STARD4Q96DR4 205 aa8.83□□□□□ -1
CCDC40-207ENST00000572253 TMEM208Q9BTX3 173 aa8.83□□□□□ -1
CCDC40-207ENST00000572253 MRPL32Q9BYC8 188 aaKnown RBP8.83□□□□□ -1
CCDC40-207ENST00000572253 PLSCR4Q9NRQ2 329 aa8.83□□□□□ -1
CCDC40-207ENST00000572253 FBXL7Q9UJT9 491 aa8.83□□□□□ -1
CCDC40-207ENST00000572253 A0A1B0GWJ7 208 aa8.82□□□□□ -1
CCDC40-207ENST00000572253 F2Z2F3 143 aa8.82□□□□□ -1
CCDC40-207ENST00000572253 APCSP02743 223 aa8.82□□□□□ -1
CCDC40-207ENST00000572253 SRIP30626 198 aa8.82□□□□□ -1
CCDC40-207ENST00000572253 TMEM30BQ3MIR4 351 aa8.82□□□□□ -1
CCDC40-207ENST00000572253 TDRG1Q3Y452 100 aa8.82□□□□□ -1
CCDC40-207ENST00000572253 KLHDC1Q8N7A1 406 aa8.82□□□□□ -1
CCDC40-207ENST00000572253 TXN2Q99757 166 aa8.82□□□□□ -1
CCDC40-207ENST00000572253 TRAV17A0A0B4J275 112 aa8.82□□□□□ -1
CCDC40-207ENST00000572253 CRYABP02511 175 aaKnown RBP8.82□□□□□ -1
CCDC40-207ENST00000572253 ZNF83P51522 516 aa8.82□□□□□ -1
CCDC40-207ENST00000572253 SLC35B1P78383 322 aa8.82□□□□□ -1
CCDC40-207ENST00000572253 GAGE1Q13065 139 aa8.82□□□□□ -1
CCDC40-207ENST00000572253 SPATA45Q537H7 98 aa8.82□□□□□ -1
CCDC40-207ENST00000572253 CYB5R2Q6BCY4 276 aa8.82□□□□□ -1
CCDC40-207ENST00000572253 PNKDQ8N490 385 aa8.82□□□□□ -1
CCDC40-207ENST00000572253 FAM169BQ8N8A8 192 aa8.82□□□□□ -1
CCDC40-207ENST00000572253 COL27A1Q8IZC6 1860 aaPredicted RBP8.82□□□□□ -1
CCDC40-207ENST00000572253 M0R1B8 84 aa8.82□□□□□ -1
CCDC40-207ENST00000572253 USF1P22415 310 aaPredicted RBP8.82□□□□□ -1
CCDC40-207ENST00000572253 UBE2L3P68036 154 aaKnown RBP8.82□□□□□ -1
CCDC40-207ENST00000572253 C17orf58Q2M2W7 97 aa8.82□□□□□ -1
CCDC40-207ENST00000572253 C2orf83Q53S99 150 aa8.82□□□□□ -1
CCDC40-207ENST00000572253 VHLLQ6RSH7 139 aa8.82□□□□□ -1
CCDC40-207ENST00000572253 ITLN1Q8WWA0 313 aa8.82□□□□□ -1
CCDC40-207ENST00000572253 COMMD5Q9GZQ3 224 aa8.82□□□□□ -1
CCDC40-207ENST00000572253 UQCR10Q9UDW1 63 aa8.82□□□□□ -1
CCDC40-207ENST00000572253 PPOXP50336 477 aa8.81□□□□□ -1
CCDC40-207ENST00000572253 ERHP84090 104 aaKnown RBP8.81□□□□□ -1
CCDC40-207ENST00000572253 C19orf35Q6ZS72 473 aa8.81□□□□□ -1
CCDC40-207ENST00000572253 OR5B3Q8NH48 314 aa8.81□□□□□ -1
CCDC40-207ENST00000572253 CHRDL1Q9BU40 450 aa8.81□□□□□ -1
CCDC40-207ENST00000572253 RNF7Q9UBF6 113 aa8.81□□□□□ -1
CCDC40-207ENST00000572253 PRR14LQ5THK1 2151 aa8.81□□□□□ -1
CCDC40-207ENST00000572253 IZUMO1RA6ND01 250 aa8.81□□□□□ -1
CCDC40-207ENST00000572253 ZNF324O75467 553 aaPredicted RBP8.81□□□□□ -1
CCDC40-207ENST00000572253 APOA2P02652 100 aa8.81□□□□□ -1
CCDC40-207ENST00000572253 MYOD1P15172 320 aa8.81□□□□□ -1
CCDC40-207ENST00000572253 BTF3P20290 206 aaKnown RBP8.81□□□□□ -1
CCDC40-207ENST00000572253 ZNF71Q9NQZ8 489 aaPredicted RBP8.81□□□□□ -1
CCDC40-207ENST00000572253 CFAP54Q96N23 3096 aa8.81□□□□□ -1
CCDC40-207ENST00000572253 A6NNC1 897 aa8.81□□□□□ -1
CCDC40-207ENST00000572253 FRMD6-AS1P0C7T7 363 aa8.81□□□□□ -1
CCDC40-207ENST00000572253 NTF3P20783 257 aa8.81□□□□□ -1
CCDC40-207ENST00000572253 OR1L8Q8NGR8 309 aa8.81□□□□□ -1
CCDC40-207ENST00000572253 FAM122AQ96E09 287 aa8.81□□□□□ -1
CCDC40-207ENST00000572253 PTPRBP23467 1997 aa8.81□□□□□ -1
CCDC40-207ENST00000572253 AHRRA9YTQ3 701 aa8.8□□□□□ -1
CCDC40-207ENST00000572253 GGTLC3B5MD39 225 aa8.8□□□□□ -1
CCDC40-207ENST00000572253 MMP23AO75900 390 aa8.8□□□□□ -1
CCDC40-207ENST00000572253 CGB3P0DN86 165 aa8.8□□□□□ -1
CCDC40-207ENST00000572253 CGB7P0DN87 165 aa8.8□□□□□ -1
CCDC40-207ENST00000572253 TNFSF4P23510 183 aa8.8□□□□□ -1
CCDC40-207ENST00000572253 GATA2P23769 480 aaPredicted RBP8.8□□□□□ -1
CCDC40-207ENST00000572253 HNRNPA3P51991 378 aaKnown RBP8.8□□□□□ -1
CCDC40-207ENST00000572253 PRO3102Q9H379 93 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms