RNA–Protein interactions for RNA: ENST00000568782.1

UBR1-207, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-207	ENST00000568782	UBAC2	Q8NBM4	344 aa		7.89	□□□□□ -1.15
UBR1-207	ENST00000568782	MCFD2	Q8NI22	146 aa		7.89	□□□□□ -1.15
UBR1-207	ENST00000568782	DYNC2LI1	Q8TCX1	351 aa		7.89	□□□□□ -1.15
UBR1-207	ENST00000568782	SMIM4	Q8WVI0	70 aa		7.89	□□□□□ -1.15
UBR1-207	ENST00000568782	BSCL2	Q96G97	398 aa	Predicted RBP	7.89	□□□□□ -1.15
UBR1-207	ENST00000568782	SEC22A	Q96IW7	307 aa		7.89	□□□□□ -1.15
UBR1-207	ENST00000568782	CCDC140	Q96MF4	163 aa		7.89	□□□□□ -1.15
UBR1-207	ENST00000568782	ATP6V0B	Q99437	205 aa		7.89	□□□□□ -1.15
UBR1-207	ENST00000568782	TMEM14B	Q9NUH8	114 aa		7.89	□□□□□ -1.15
UBR1-207	ENST00000568782	KLK9	Q9UKQ9	250 aa		7.89	□□□□□ -1.15
UBR1-207	ENST00000568782	KCNIP3	Q9Y2W7	256 aa		7.89	□□□□□ -1.15
UBR1-207	ENST00000568782	F11R	Q9Y624	299 aa	Known RBP	7.89	□□□□□ -1.15
UBR1-207	ENST00000568782	PIGBOS1	A0A0B4J2F0	54 aa		7.88	□□□□□ -1.15
UBR1-207	ENST00000568782	MFSD2B	A6NFX1	497 aa		7.88	□□□□□ -1.15
UBR1-207	ENST00000568782	CGB1	A6NKQ9	187 aa		7.88	□□□□□ -1.15
UBR1-207	ENST00000568782	NUPL2	O15504	423 aa	Known RBP	7.88	□□□□□ -1.15
UBR1-207	ENST00000568782	TGOLN2	O43493	480 aa		7.88	□□□□□ -1.15
UBR1-207	ENST00000568782	SCGB2A1	O75556	95 aa		7.88	□□□□□ -1.15
UBR1-207	ENST00000568782	CD74	P04233	296 aa		7.88	□□□□□ -1.15
UBR1-207	ENST00000568782	CTSD	P07339	412 aa	Predicted RBP	7.88	□□□□□ -1.15
UBR1-207	ENST00000568782	IGHV4-30-4	P0DP06	118 aa		7.88	□□□□□ -1.15
UBR1-207	ENST00000568782	ELL	P55199	621 aa	Predicted RBP	7.88	□□□□□ -1.15
UBR1-207	ENST00000568782	CD81	P60033	236 aa		7.88	□□□□□ -1.15
UBR1-207	ENST00000568782	REL	Q04864	619 aa	Predicted RBP	7.88	□□□□□ -1.15
UBR1-207	ENST00000568782	WT1-AS	Q06250	92 aa		7.88	□□□□□ -1.15
UBR1-207	ENST00000568782	SURF2	Q15527	256 aa	Predicted RBP	7.88	□□□□□ -1.15
UBR1-207	ENST00000568782	CD300E	Q496F6	205 aa	Predicted RBP	7.88	□□□□□ -1.15
UBR1-207	ENST00000568782	ZNF57	Q68EA5	555 aa	Predicted RBP	7.88	□□□□□ -1.15
UBR1-207	ENST00000568782	IL34	Q6ZMJ4	242 aa		7.88	□□□□□ -1.15
UBR1-207	ENST00000568782	LHFPL1	Q86WI0	220 aa		7.88	□□□□□ -1.15
UBR1-207	ENST00000568782	SBSPON	Q8IVN8	264 aa		7.88	□□□□□ -1.15
UBR1-207	ENST00000568782	OR1P1	Q8NH06	330 aa		7.88	□□□□□ -1.15
UBR1-207	ENST00000568782	ZNF502	Q8TBZ5	544 aa		7.88	□□□□□ -1.15
UBR1-207	ENST00000568782	MARCH1	Q8TCQ1	289 aa		7.88	□□□□□ -1.15
UBR1-207	ENST00000568782	ISOC1	Q96CN7	298 aa		7.88	□□□□□ -1.15
UBR1-207	ENST00000568782	MISP3	Q96FF7	219 aa		7.88	□□□□□ -1.15
UBR1-207	ENST00000568782	MIXL1	Q9H2W2	232 aa		7.88	□□□□□ -1.15
UBR1-207	ENST00000568782	ZC4H2	Q9NQZ6	224 aa		7.88	□□□□□ -1.15
UBR1-207	ENST00000568782	MCUB	Q9NWR8	336 aa		7.88	□□□□□ -1.15
UBR1-207	ENST00000568782	C21orf62	Q9NYP8	219 aa		7.88	□□□□□ -1.15
UBR1-207	ENST00000568782	MRPL27	Q9P0M9	148 aa	Known RBP	7.88	□□□□□ -1.15
UBR1-207	ENST00000568782	CACFD1	Q9UGQ2	172 aa		7.88	□□□□□ -1.15
UBR1-207	ENST00000568782	OR2T8	A6NH00	312 aa		7.87	□□□□□ -1.15
UBR1-207	ENST00000568782		A8MZ25	164 aa		7.87	□□□□□ -1.15
UBR1-207	ENST00000568782		H3BMQ9	156 aa		7.87	□□□□□ -1.15
UBR1-207	ENST00000568782	CORT	O00230	105 aa		7.87	□□□□□ -1.15
UBR1-207	ENST00000568782	MFAP4	P55083	255 aa		7.87	□□□□□ -1.15
UBR1-207	ENST00000568782	AP3S2	P59780	193 aa		7.87	□□□□□ -1.15
UBR1-207	ENST00000568782	PRCD	Q00LT1	54 aa		7.87	□□□□□ -1.15
UBR1-207	ENST00000568782	DHODH	Q02127	395 aa		7.87	□□□□□ -1.15
UBR1-207	ENST00000568782	DEFB114	Q30KQ6	69 aa		7.87	□□□□□ -1.15
UBR1-207	ENST00000568782	LAMTOR1	Q6IAA8	161 aa		7.87	□□□□□ -1.15
UBR1-207	ENST00000568782	FAM219A	Q8IW50	185 aa		7.87	□□□□□ -1.15
UBR1-207	ENST00000568782	UXS1	Q8NBZ7	420 aa		7.87	□□□□□ -1.15
UBR1-207	ENST00000568782	OR4D10	Q8NGI6	311 aa		7.87	□□□□□ -1.15
UBR1-207	ENST00000568782	OR13C8	Q8NGS7	320 aa		7.87	□□□□□ -1.15
UBR1-207	ENST00000568782	PINX1	Q96BK5	328 aa	Known RBP	7.87	□□□□□ -1.15
UBR1-207	ENST00000568782	RCHY1	Q96PM5	261 aa		7.87	□□□□□ -1.15
UBR1-207	ENST00000568782	NEURL2	Q9BR09	285 aa		7.87	□□□□□ -1.15
UBR1-207	ENST00000568782	TRAV25	A0A0B4J276	109 aa		7.86	□□□□□ -1.15
UBR1-207	ENST00000568782	IGHV3-35	A0A0C4DH35	117 aa		7.86	□□□□□ -1.15
UBR1-207	ENST00000568782		A8MWP6	167 aa		7.86	□□□□□ -1.15
UBR1-207	ENST00000568782	NDUFA4	O00483	81 aa		7.86	□□□□□ -1.15
UBR1-207	ENST00000568782	GNG7	O60262	68 aa		7.86	□□□□□ -1.15
UBR1-207	ENST00000568782	ANXA3	P12429	323 aa		7.86	□□□□□ -1.15
UBR1-207	ENST00000568782	BMI1	P35226	326 aa		7.86	□□□□□ -1.15
UBR1-207	ENST00000568782	HOXA1	P49639	335 aa	Predicted RBP	7.86	□□□□□ -1.15
UBR1-207	ENST00000568782	SP6	Q3SY56	376 aa		7.86	□□□□□ -1.15
UBR1-207	ENST00000568782	PYDC2	Q56P42	97 aa		7.86	□□□□□ -1.15
UBR1-207	ENST00000568782		Q8N1Y9	231 aa		7.86	□□□□□ -1.15
UBR1-207	ENST00000568782	OR2C3	Q8N628	320 aa		7.86	□□□□□ -1.15
UBR1-207	ENST00000568782	DUSP18	Q8NEJ0	188 aa		7.86	□□□□□ -1.15
UBR1-207	ENST00000568782	OR52B4	Q8NGK2	314 aa		7.86	□□□□□ -1.15
UBR1-207	ENST00000568782	SCARB1	Q8WTV0	552 aa		7.86	□□□□□ -1.15
UBR1-207	ENST00000568782	TP53RK	Q96S44	253 aa		7.86	□□□□□ -1.15
UBR1-207	ENST00000568782	TXN2	Q99757	166 aa		7.86	□□□□□ -1.15
UBR1-207	ENST00000568782	C20orf24	Q9BUV8	137 aa		7.86	□□□□□ -1.15
UBR1-207	ENST00000568782	DAZ1	Q9NQZ3	744 aa	Known RBP	7.86	□□□□□ -1.15
UBR1-207	ENST00000568782	COL7A1	Q02388	2944 aa		7.85	□□□□□ -1.15
UBR1-207	ENST00000568782	IGHV3-21	A0A0B4J1V1	117 aa		7.85	□□□□□ -1.15
UBR1-207	ENST00000568782	IZUMO1R	A6ND01	250 aa		7.85	□□□□□ -1.15
UBR1-207	ENST00000568782	OR11H12	B2RN74	326 aa		7.85	□□□□□ -1.15
UBR1-207	ENST00000568782	GSTZ1	O43708	216 aa	Predicted RBP	7.85	□□□□□ -1.15
UBR1-207	ENST00000568782	YIF1A	O95070	293 aa		7.85	□□□□□ -1.15
UBR1-207	ENST00000568782	IGKV1-39	P01597	117 aa		7.85	□□□□□ -1.15
UBR1-207	ENST00000568782	IGKV1D-39	P04432	117 aa		7.85	□□□□□ -1.15
UBR1-207	ENST00000568782	OR5AC1	P0C628	307 aa		7.85	□□□□□ -1.15
UBR1-207	ENST00000568782	UCP1	P25874	307 aa		7.85	□□□□□ -1.15
UBR1-207	ENST00000568782	TNFSF8	P32971	234 aa		7.85	□□□□□ -1.15
UBR1-207	ENST00000568782	NPBWR1	P48145	328 aa		7.85	□□□□□ -1.15
UBR1-207	ENST00000568782	INPP1	P49441	399 aa		7.85	□□□□□ -1.15
UBR1-207	ENST00000568782	TM4SF20	Q53R12	229 aa		7.85	□□□□□ -1.15
UBR1-207	ENST00000568782	FAAP20	Q6NZ36	180 aa		7.85	□□□□□ -1.15
UBR1-207	ENST00000568782	TOMM5	Q8N4H5	51 aa		7.85	□□□□□ -1.15
UBR1-207	ENST00000568782	ZNF114	Q8NC26	417 aa		7.85	□□□□□ -1.15
UBR1-207	ENST00000568782	OR51S1	Q8NGJ8	323 aa		7.85	□□□□□ -1.15
UBR1-207	ENST00000568782	OR4C16	Q8NGL9	310 aa		7.85	□□□□□ -1.15
UBR1-207	ENST00000568782	RBPMS	Q93062	196 aa	Known RBP	7.85	□□□□□ -1.15
UBR1-207	ENST00000568782	SPATA25	Q9BR10	227 aa		7.85	□□□□□ -1.15
UBR1-207	ENST00000568782	THAP7	Q9BT49	309 aa	Predicted RBP	7.85	□□□□□ -1.15

Retrieved 100 of 20,778 RNA–protein pairs in 28 ms