RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 NXPH3O95157 252 aa3.71□□□□□ -1.82
HERC1-213ENST00000561359 GABARAPO95166 117 aa3.71□□□□□ -1.82
HERC1-213ENST00000561359 DHFRP00374 187 aa3.71□□□□□ -1.82
HERC1-213ENST00000561359 OXTP01178 125 aa3.71□□□□□ -1.82
HERC1-213ENST00000561359 OR2T7P0C7T2 308 aa3.71□□□□□ -1.82
HERC1-213ENST00000561359 SPP1P10451 314 aa3.71□□□□□ -1.82
HERC1-213ENST00000561359 FCGR1AP12314 374 aa3.71□□□□□ -1.82
HERC1-213ENST00000561359 COX4I1P13073 169 aa3.71□□□□□ -1.82
HERC1-213ENST00000561359 C4BPBP20851 252 aa3.71□□□□□ -1.82
HERC1-213ENST00000561359 ATP6V1E1P36543 226 aa3.71□□□□□ -1.82
HERC1-213ENST00000561359 ETV6P41212 452 aa3.71□□□□□ -1.82
HERC1-213ENST00000561359 MEOX2P50222 304 aa3.71□□□□□ -1.82
HERC1-213ENST00000561359 CCL18P55774 89 aa3.71□□□□□ -1.82
HERC1-213ENST00000561359 GABARAPL2P60520 117 aa3.71□□□□□ -1.82
HERC1-213ENST00000561359 PAFAH1B2P68402 229 aa3.71□□□□□ -1.82
HERC1-213ENST00000561359 PLA2G7Q13093 441 aa3.71□□□□□ -1.82
HERC1-213ENST00000561359 FLOT2Q14254 428 aa3.71□□□□□ -1.82
HERC1-213ENST00000561359 PTGES3Q15185 160 aaKnown RBP3.71□□□□□ -1.82
HERC1-213ENST00000561359 TTC32Q5I0X7 151 aa3.71□□□□□ -1.82
HERC1-213ENST00000561359 RBM48Q5RL73 367 aaKnown RBP3.71□□□□□ -1.82
HERC1-213ENST00000561359 C10orf55Q5SWW7 151 aa3.71□□□□□ -1.82
HERC1-213ENST00000561359 OR2T5Q6IEZ7 315 aa3.71□□□□□ -1.82
HERC1-213ENST00000561359 HACD2Q6Y1H2 254 aa3.71□□□□□ -1.82
HERC1-213ENST00000561359 CEACAM19Q7Z692 300 aa3.71□□□□□ -1.82
HERC1-213ENST00000561359 DEFB107AQ8IZN7 70 aa3.71□□□□□ -1.82
HERC1-213ENST00000561359 GAPTQ8N292 157 aa3.71□□□□□ -1.82
HERC1-213ENST00000561359 TEX45Q8NA69 505 aa3.71□□□□□ -1.82
HERC1-213ENST00000561359 OR51A2Q8NGJ7 313 aa3.71□□□□□ -1.82
HERC1-213ENST00000561359 OR2T29Q8NH02 315 aa3.71□□□□□ -1.82
HERC1-213ENST00000561359 MRPL30Q8TCC3 161 aaKnown RBP3.71□□□□□ -1.82
HERC1-213ENST00000561359 RFKQ969G6 155 aa3.71□□□□□ -1.82
HERC1-213ENST00000561359 CXorf58Q96LI9 332 aa3.71□□□□□ -1.82
HERC1-213ENST00000561359 FYTTD1Q96QD9 318 aaKnown RBP3.71□□□□□ -1.82
HERC1-213ENST00000561359 OR2A7Q96R45 310 aa3.71□□□□□ -1.82
HERC1-213ENST00000561359 RNF2Q99496 336 aa3.71□□□□□ -1.82
HERC1-213ENST00000561359 NIPSNAP3BQ9BS92 247 aa3.71□□□□□ -1.82
HERC1-213ENST00000561359 AGMATQ9BSE5 352 aa3.71□□□□□ -1.82
HERC1-213ENST00000561359 KRTAP9-8Q9BYQ0 159 aa3.71□□□□□ -1.82
HERC1-213ENST00000561359 ZNF436Q9C0F3 470 aaPredicted RBP3.71□□□□□ -1.82
HERC1-213ENST00000561359 NAA50Q9GZZ1 169 aaKnown RBP3.71□□□□□ -1.82
HERC1-213ENST00000561359 SLC2A9Q9NRM0 540 aa3.71□□□□□ -1.82
HERC1-213ENST00000561359 IL36GQ9NZH8 169 aa3.71□□□□□ -1.82
HERC1-213ENST00000561359 AASSQ9UDR5 926 aa3.71□□□□□ -1.82
HERC1-213ENST00000561359 SPATA2Q9UM82 520 aa3.71□□□□□ -1.82
HERC1-213ENST00000561359 ETV7Q9Y603 341 aa3.71□□□□□ -1.82
HERC1-213ENST00000561359 PKHD1L1Q86WI1 4243 aa3.71□□□□□ -1.82
HERC1-213ENST00000561359 TRBV5-7A0A0A0MS05 114 aa3.7□□□□□ -1.82
HERC1-213ENST00000561359 IGHV3-49A0A0A0MS15 119 aa3.7□□□□□ -1.82
HERC1-213ENST00000561359 RPS10-NUDT3A0A1W2PQS6 291 aa3.7□□□□□ -1.82
HERC1-213ENST00000561359 TCRBV3S1A0A5B6 114 aa3.7□□□□□ -1.82
HERC1-213ENST00000561359 NPIPB5A8MRT5 1133 aa3.7□□□□□ -1.82
HERC1-213ENST00000561359 M0R129 80 aa3.7□□□□□ -1.82
HERC1-213ENST00000561359 DNASE2O00115 360 aaPredicted RBP3.7□□□□□ -1.82
HERC1-213ENST00000561359 CREBL2O60519 120 aaPredicted RBP3.7□□□□□ -1.82
HERC1-213ENST00000561359 SC5DO75845 299 aa3.7□□□□□ -1.82
HERC1-213ENST00000561359 SCO1O75880 301 aa3.7□□□□□ -1.82
HERC1-213ENST00000561359 DFFBO76075 338 aa3.7□□□□□ -1.82
HERC1-213ENST00000561359 SLC22A5O76082 557 aa3.7□□□□□ -1.82
HERC1-213ENST00000561359 C1QBP02746 253 aa3.7□□□□□ -1.82
HERC1-213ENST00000561359 REG1AP05451 166 aa3.7□□□□□ -1.82
HERC1-213ENST00000561359 CDK1P06493 297 aa3.7□□□□□ -1.82
HERC1-213ENST00000561359 FABP1P07148 127 aa3.7□□□□□ -1.82
HERC1-213ENST00000561359 HTR1AP08908 422 aa3.7□□□□□ -1.82
HERC1-213ENST00000561359 HSMCR30P0CW71 290 aa3.7□□□□□ -1.82
HERC1-213ENST00000561359 SMIM6P0DI80 62 aa3.7□□□□□ -1.82
HERC1-213ENST00000561359 DEFA4P12838 97 aa3.7□□□□□ -1.82
HERC1-213ENST00000561359 S100PP25815 95 aa3.7□□□□□ -1.82
HERC1-213ENST00000561359 HLA-DMAP28067 261 aa3.7□□□□□ -1.82
HERC1-213ENST00000561359 CEACAM6P40199 344 aa3.7□□□□□ -1.82
HERC1-213ENST00000561359 SOX2P48431 317 aa3.7□□□□□ -1.82
HERC1-213ENST00000561359 RAB4BP61018 213 aa3.7□□□□□ -1.82
HERC1-213ENST00000561359 UBE2KP61086 200 aa3.7□□□□□ -1.82
HERC1-213ENST00000561359 TSPAN5P62079 268 aa3.7□□□□□ -1.82
HERC1-213ENST00000561359 HMGN3Q15651 99 aa3.7□□□□□ -1.82
HERC1-213ENST00000561359 CTF1Q16619 201 aa3.7□□□□□ -1.82
HERC1-213ENST00000561359 RTL8BQ17RB0 113 aa3.7□□□□□ -1.82
HERC1-213ENST00000561359 CLLU1Q5K131 121 aa3.7□□□□□ -1.82
HERC1-213ENST00000561359 AADACL4Q5VUY2 407 aa3.7□□□□□ -1.82
HERC1-213ENST00000561359 NXNL2Q5VZ03 156 aa3.7□□□□□ -1.82
HERC1-213ENST00000561359 XAF1Q6GPH4 301 aa3.7□□□□□ -1.82
HERC1-213ENST00000561359 GSG1LQ6UXU4 331 aa3.7□□□□□ -1.82
HERC1-213ENST00000561359 PARP16Q8N5Y8 322 aa3.7□□□□□ -1.82
HERC1-213ENST00000561359 NKAIN3Q8N8D7 197 aa3.7□□□□□ -1.82
HERC1-213ENST00000561359 ZBTB34Q8NCN2 500 aa3.7□□□□□ -1.82
HERC1-213ENST00000561359 DYNC2LI1Q8TCX1 351 aa3.7□□□□□ -1.82
HERC1-213ENST00000561359 DEDD2Q8WXF8 326 aa3.7□□□□□ -1.82
HERC1-213ENST00000561359 MUL1Q969V5 352 aa3.7□□□□□ -1.82
HERC1-213ENST00000561359 CCDC32Q9BV29 185 aa3.7□□□□□ -1.82
HERC1-213ENST00000561359 RHPN1-AS1Q9BWJ2 59 aa3.7□□□□□ -1.82
HERC1-213ENST00000561359 KRTAP1-5Q9BYS1 174 aa3.7□□□□□ -1.82
HERC1-213ENST00000561359 NXF2Q9GZY0 626 aaKnown RBP3.7□□□□□ -1.82
HERC1-213ENST00000561359 ZNF430Q9H8G1 570 aaPredicted RBP3.7□□□□□ -1.82
HERC1-213ENST00000561359 Q9H8V8 135 aa3.7□□□□□ -1.82
HERC1-213ENST00000561359 ISG20L2Q9H9L3 353 aaKnown RBP3.7□□□□□ -1.82
HERC1-213ENST00000561359 MED9Q9NWA0 146 aa3.7□□□□□ -1.82
HERC1-213ENST00000561359 SMPXQ9UHP9 88 aa3.7□□□□□ -1.82
HERC1-213ENST00000561359 ELF5Q9UKW6 265 aaPredicted RBP3.7□□□□□ -1.82
HERC1-213ENST00000561359 PNMA8CA0A1B0GUJ8 204 aa3.69□□□□□ -1.82
HERC1-213ENST00000561359 TEX48A0A1B0GUV7 120 aa3.69□□□□□ -1.82
HERC1-213ENST00000561359 A0A1W2PPQ1 181 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms