RNA–Protein interactions for RNA: ENST00000561253.5

LRRC28-220, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-220ENST00000561253 C16orf95Q9H693 158 aa4.65□□□□□ -1.67
LRRC28-220ENST00000561253 HRASLSQ9HDD0 168 aa4.65□□□□□ -1.67
LRRC28-220ENST00000561253 CCL28Q9NRJ3 127 aa4.65□□□□□ -1.67
LRRC28-220ENST00000561253 MMP24Q9Y5R2 645 aa4.65□□□□□ -1.67
LRRC28-220ENST00000561253 J3QRK9 145 aa4.64□□□□□ -1.67
LRRC28-220ENST00000561253 RBFOX2O43251 390 aaKnown RBP eCLIP4.64□□□□□ -1.67
LRRC28-220ENST00000561253 FGF16O43320 207 aa4.64□□□□□ -1.67
LRRC28-220ENST00000561253 PGLYRP1O75594 196 aaPredicted RBP4.64□□□□□ -1.67
LRRC28-220ENST00000561253 MOSP00540 346 aa4.64□□□□□ -1.67
LRRC28-220ENST00000561253 FXYD4P59646 89 aa4.64□□□□□ -1.67
LRRC28-220ENST00000561253 RND3P61587 244 aa4.64□□□□□ -1.67
LRRC28-220ENST00000561253 NDPQ00604 133 aa4.64□□□□□ -1.67
LRRC28-220ENST00000561253 MEF2DQ14814 521 aa4.64□□□□□ -1.67
LRRC28-220ENST00000561253 PYDC2Q56P42 97 aa4.64□□□□□ -1.67
LRRC28-220ENST00000561253 OR4A47Q6IF82 309 aa4.64□□□□□ -1.67
LRRC28-220ENST00000561253 TMEM17Q86X19 198 aa4.64□□□□□ -1.67
LRRC28-220ENST00000561253 PDPNQ86YL7 162 aa4.64□□□□□ -1.67
LRRC28-220ENST00000561253 OR8H1Q8NGG4 311 aa4.64□□□□□ -1.67
LRRC28-220ENST00000561253 OR51S1Q8NGJ8 323 aa4.64□□□□□ -1.67
LRRC28-220ENST00000561253 OR6F1Q8NGZ6 308 aa4.64□□□□□ -1.67
LRRC28-220ENST00000561253 OR2T10Q8NGZ9 312 aa4.64□□□□□ -1.67
LRRC28-220ENST00000561253 TERB2Q8NHR7 220 aa4.64□□□□□ -1.67
LRRC28-220ENST00000561253 LINC01006Q8NI28 216 aa4.64□□□□□ -1.67
LRRC28-220ENST00000561253 CAPSLQ8WWF8 208 aa4.64□□□□□ -1.67
LRRC28-220ENST00000561253 AKR1E2Q96JD6 320 aa4.64□□□□□ -1.67
LRRC28-220ENST00000561253 HSD17B10Q99714 261 aaKnown RBP4.64□□□□□ -1.67
LRRC28-220ENST00000561253 RNF5Q99942 180 aa4.64□□□□□ -1.67
LRRC28-220ENST00000561253 RTBDNQ9BSG5 229 aaPredicted RBP4.64□□□□□ -1.67
LRRC28-220ENST00000561253 C19orf24Q9BVV8 132 aa4.64□□□□□ -1.67
LRRC28-220ENST00000561253 SLC5A7Q9GZV3 580 aa4.64□□□□□ -1.67
LRRC28-220ENST00000561253 RANBP3Q9H6Z4 567 aaPredicted RBP4.64□□□□□ -1.67
LRRC28-220ENST00000561253 ABCB10Q9NRK6 738 aa4.64□□□□□ -1.67
LRRC28-220ENST00000561253 TNFRSF19Q9NS68 423 aa4.64□□□□□ -1.67
LRRC28-220ENST00000561253 TAS2R8Q9NYW2 309 aa4.64□□□□□ -1.67
LRRC28-220ENST00000561253 ZNF221Q9UK13 617 aa4.64□□□□□ -1.67
LRRC28-220ENST00000561253 PITPNC1Q9UKF7 332 aa4.64□□□□□ -1.67
LRRC28-220ENST00000561253 SIGLEC9Q9Y336 463 aa4.64□□□□□ -1.67
LRRC28-220ENST00000561253 WASHC3Q9Y3C0 194 aa4.64□□□□□ -1.67
LRRC28-220ENST00000561253 MEGF8Q7Z7M0 2845 aa4.64□□□□□ -1.67
LRRC28-220ENST00000561253 FBN3Q75N90 2809 aa4.64□□□□□ -1.67
LRRC28-220ENST00000561253 PRKDCP78527 4128 aaKnown RBP4.63□□□□□ -1.67
LRRC28-220ENST00000561253 IGHV7-81A0A0B4J1V7 117 aa4.63□□□□□ -1.67
LRRC28-220ENST00000561253 GPR31O00270 319 aa4.63□□□□□ -1.67
LRRC28-220ENST00000561253 FCN1O00602 326 aa4.63□□□□□ -1.67
LRRC28-220ENST00000561253 RAMP3O60896 148 aa4.63□□□□□ -1.67
LRRC28-220ENST00000561253 IGKV1-39P01597 117 aa4.63□□□□□ -1.67
LRRC28-220ENST00000561253 IGHG2P01859 326 aa4.63□□□□□ -1.67
LRRC28-220ENST00000561253 HLA-DRB1P01911 266 aa4.63□□□□□ -1.67
LRRC28-220ENST00000561253 IGKV1D-39P04432 117 aa4.63□□□□□ -1.67
LRRC28-220ENST00000561253 P0C879 139 aa4.63□□□□□ -1.67
LRRC28-220ENST00000561253 AKAIN1P0CW23 69 aa4.63□□□□□ -1.67
LRRC28-220ENST00000561253 CD40LGP29965 261 aa4.63□□□□□ -1.67
LRRC28-220ENST00000561253 ARHGDIBP52566 201 aa4.63□□□□□ -1.67
LRRC28-220ENST00000561253 CRIP2P52943 208 aaPredicted RBP4.63□□□□□ -1.67
LRRC28-220ENST00000561253 KRTAP10-3P60369 221 aa4.63□□□□□ -1.67
LRRC28-220ENST00000561253 SURF2Q15527 256 aaPredicted RBP4.63□□□□□ -1.67
LRRC28-220ENST00000561253 POU2AF1Q16633 256 aa4.63□□□□□ -1.67
LRRC28-220ENST00000561253 C5orf64Q2M2E5 130 aa4.63□□□□□ -1.67
LRRC28-220ENST00000561253 PDLIM3Q53GG5 364 aaPredicted RBP4.63□□□□□ -1.67
LRRC28-220ENST00000561253 NRARPQ7Z6K4 114 aa4.63□□□□□ -1.67
LRRC28-220ENST00000561253 TMEM158Q8WZ71 300 aa4.63□□□□□ -1.67
LRRC28-220ENST00000561253 TMEM230Q96A57 120 aa4.63□□□□□ -1.67
LRRC28-220ENST00000561253 ADTRPQ96IZ2 230 aa4.63□□□□□ -1.67
LRRC28-220ENST00000561253 HSPB9Q9BQS6 159 aa4.63□□□□□ -1.67
LRRC28-220ENST00000561253 CCDC32Q9BV29 185 aa4.63□□□□□ -1.67
LRRC28-220ENST00000561253 KRTAP1-5Q9BYS1 174 aa4.63□□□□□ -1.67
LRRC28-220ENST00000561253 C5orf66Q9H5L9 145 aa4.63□□□□□ -1.67
LRRC28-220ENST00000561253 RAB18Q9NP72 206 aa4.63□□□□□ -1.67
LRRC28-220ENST00000561253 SLC2A9Q9NRM0 540 aa4.63□□□□□ -1.67
LRRC28-220ENST00000561253 FAM212BQ9NTI7 297 aaPredicted RBP4.63□□□□□ -1.67
LRRC28-220ENST00000561253 SLC35D1Q9NTN3 355 aa4.63□□□□□ -1.67
LRRC28-220ENST00000561253 TBC1D24Q9ULP9 559 aa4.63□□□□□ -1.67
LRRC28-220ENST00000561253 GPR132Q9UNW8 380 aa4.63□□□□□ -1.67
LRRC28-220ENST00000561253 VSIG4Q9Y279 399 aa4.63□□□□□ -1.67
LRRC28-220ENST00000561253 MOB4Q9Y3A3 225 aa4.63□□□□□ -1.67
LRRC28-220ENST00000561253 A0A1B0GW64 132 aa4.62□□□□□ -1.67
LRRC28-220ENST00000561253 BTBD17A6NE02 478 aa4.62□□□□□ -1.67
LRRC28-220ENST00000561253 M0QZK8 103 aa4.62□□□□□ -1.67
LRRC28-220ENST00000561253 NBR2O15453 112 aa4.62□□□□□ -1.67
LRRC28-220ENST00000561253 TNFSF12O43508 249 aa4.62□□□□□ -1.67
LRRC28-220ENST00000561253 CRYZL1O95825 349 aa4.62□□□□□ -1.67
LRRC28-220ENST00000561253 IGKV3-20P01619 116 aa4.62□□□□□ -1.67
LRRC28-220ENST00000561253 APOHP02749 345 aaPredicted RBP4.62□□□□□ -1.67
LRRC28-220ENST00000561253 IGF1P05019 195 aa4.62□□□□□ -1.67
LRRC28-220ENST00000561253 CTSDP07339 412 aaPredicted RBP4.62□□□□□ -1.67
LRRC28-220ENST00000561253 SPP1P10451 314 aa4.62□□□□□ -1.67
LRRC28-220ENST00000561253 MDKP21741 143 aaPredicted RBP4.62□□□□□ -1.67
LRRC28-220ENST00000561253 F2RP25116 425 aa4.62□□□□□ -1.67
LRRC28-220ENST00000561253 SLC6A1P30531 599 aa4.62□□□□□ -1.67
LRRC28-220ENST00000561253 LGALS7P47929 136 aa4.62□□□□□ -1.67
LRRC28-220ENST00000561253 RAG2P55895 527 aa4.62□□□□□ -1.67
LRRC28-220ENST00000561253 UBE2KP61086 200 aa4.62□□□□□ -1.67
LRRC28-220ENST00000561253 TSPAN5P62079 268 aa4.62□□□□□ -1.67
LRRC28-220ENST00000561253 SUPT4H1P63272 117 aaKnown RBP4.62□□□□□ -1.67
LRRC28-220ENST00000561253 PJVKQ0ZLH3 352 aa4.62□□□□□ -1.67
LRRC28-220ENST00000561253 PSG5Q15238 335 aa4.62□□□□□ -1.67
LRRC28-220ENST00000561253 MMDQ15546 238 aa4.62□□□□□ -1.67
LRRC28-220ENST00000561253 ZNF876PQ49A33 203 aa4.62□□□□□ -1.67
LRRC28-220ENST00000561253 IDO2Q6ZQW0 420 aa4.62□□□□□ -1.67
LRRC28-220ENST00000561253 KCTD9Q7L273 389 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms