RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 TNFAIP8L3Q5GJ75 292 aa2.54□□□□□ -2
VRK1-205ENST00000555402 SGMS2Q8NHU3 365 aa2.54□□□□□ -2
VRK1-205ENST00000555402 TCEAL4Q96EI5 215 aa2.54□□□□□ -2
VRK1-205ENST00000555402 EFCAB11Q9BUY7 163 aa2.54□□□□□ -2
VRK1-205ENST00000555402 C1QTNF6Q9BXI9 259 aa2.54□□□□□ -2
VRK1-205ENST00000555402 CHST6Q9GZX3 395 aa2.54□□□□□ -2
VRK1-205ENST00000555402 PARVBQ9HBI1 364 aa2.54□□□□□ -2
VRK1-205ENST00000555402 TMEM138Q9NPI0 162 aa2.54□□□□□ -2
VRK1-205ENST00000555402 OR52A1Q9UKL2 312 aa2.54□□□□□ -2
VRK1-205ENST00000555402 SNX12Q9UMY4 172 aa2.54□□□□□ -2
VRK1-205ENST00000555402 CYSLTR1Q9Y271 337 aa2.54□□□□□ -2
VRK1-205ENST00000555402 NEO1Q92859 1461 aa2.53□□□□□ -2
VRK1-205ENST00000555402 PTPRJQ12913 1337 aa2.53□□□□□ -2
VRK1-205ENST00000555402 TRBV20OR9-2A0A075B6H5 130 aa2.53□□□□□ -2
VRK1-205ENST00000555402 DPRXA6NFQ7 191 aa2.53□□□□□ -2
VRK1-205ENST00000555402 M0QZK8 103 aa2.53□□□□□ -2
VRK1-205ENST00000555402 AIPO00170 330 aa2.53□□□□□ -2
VRK1-205ENST00000555402 PLA2G10O15496 165 aa2.53□□□□□ -2
VRK1-205ENST00000555402 CSN2P05814 226 aa2.53□□□□□ -2
VRK1-205ENST00000555402 LGALS1P09382 135 aaKnown RBP2.53□□□□□ -2
VRK1-205ENST00000555402 SMIM17P0DL12 118 aa2.53□□□□□ -2
VRK1-205ENST00000555402 IGHV3-30-3P0DP02 117 aa2.53□□□□□ -2
VRK1-205ENST00000555402 GZMHP20718 246 aa2.53□□□□□ -2
VRK1-205ENST00000555402 SERPINB10P48595 397 aa2.53□□□□□ -2
VRK1-205ENST00000555402 GTF2A1P52655 376 aaPredicted RBP2.53□□□□□ -2
VRK1-205ENST00000555402 TAS2R45P59539 299 aa2.53□□□□□ -2
VRK1-205ENST00000555402 RASL11AQ6T310 242 aa2.53□□□□□ -2
VRK1-205ENST00000555402 ZNF322Q6U7Q0 402 aaPredicted RBP2.53□□□□□ -2
VRK1-205ENST00000555402 ZNF283Q8N7M2 679 aa2.53□□□□□ -2
VRK1-205ENST00000555402 OR13C8Q8NGS7 320 aa2.53□□□□□ -2
VRK1-205ENST00000555402 SLC25A40Q8TBP6 338 aa2.53□□□□□ -2
VRK1-205ENST00000555402 ACOT12Q8WYK0 555 aa2.53□□□□□ -2
VRK1-205ENST00000555402 RNASE6Q93091 150 aaKnown RBP2.53□□□□□ -2
VRK1-205ENST00000555402 LYSMD1Q96S90 227 aa2.53□□□□□ -2
VRK1-205ENST00000555402 TSC22D3Q99576 134 aa2.53□□□□□ -2
VRK1-205ENST00000555402 MND1Q9BWT6 205 aa2.53□□□□□ -2
VRK1-205ENST00000555402 AICDAQ9GZX7 198 aa2.53□□□□□ -2
VRK1-205ENST00000555402 ZNF638Q14966 1978 aaKnown RBP2.52□□□□□ -2.01
VRK1-205ENST00000555402 SCN10AQ9Y5Y9 1956 aa2.52□□□□□ -2.01
VRK1-205ENST00000555402 TAF1LQ8IZX4 1826 aa2.52□□□□□ -2.01
VRK1-205ENST00000555402 SIGLEC16A6NMB1 481 aa2.52□□□□□ -2.01
VRK1-205ENST00000555402 CLDN25C9JDP6 229 aa2.52□□□□□ -2.01
VRK1-205ENST00000555402 J3QRE1 110 aa2.52□□□□□ -2.01
VRK1-205ENST00000555402 J3QRK9 145 aa2.52□□□□□ -2.01
VRK1-205ENST00000555402 SLC17A3O00476 420 aa2.52□□□□□ -2.01
VRK1-205ENST00000555402 SOD1P00441 154 aa2.52□□□□□ -2.01
VRK1-205ENST00000555402 IFNA7P01567 189 aa2.52□□□□□ -2.01
VRK1-205ENST00000555402 APOA2P02652 100 aa2.52□□□□□ -2.01
VRK1-205ENST00000555402 ZNF705DP0CH99 300 aaPredicted RBP2.52□□□□□ -2.01
VRK1-205ENST00000555402 SMIM10L2AP0DMW4 78 aa2.52□□□□□ -2.01
VRK1-205ENST00000555402 SMIM10L2BP0DMW5 78 aa2.52□□□□□ -2.01
VRK1-205ENST00000555402 G6PCP35575 357 aa2.52□□□□□ -2.01
VRK1-205ENST00000555402 PSMD8P48556 350 aa2.52□□□□□ -2.01
VRK1-205ENST00000555402 SRP9P49458 86 aaKnown RBP2.52□□□□□ -2.01
VRK1-205ENST00000555402 RAB13P51153 203 aa2.52□□□□□ -2.01
VRK1-205ENST00000555402 TBPL1P62380 186 aa2.52□□□□□ -2.01
VRK1-205ENST00000555402 HBA1P69905 142 aa2.52□□□□□ -2.01
VRK1-205ENST00000555402 ZNF117Q03924 483 aa2.52□□□□□ -2.01
VRK1-205ENST00000555402 FAM229BQ4G0N7 80 aa2.52□□□□□ -2.01
VRK1-205ENST00000555402 CCDC58Q4VC31 144 aa2.52□□□□□ -2.01
VRK1-205ENST00000555402 TCF24Q7RTU0 167 aa2.52□□□□□ -2.01
VRK1-205ENST00000555402 GPHB5Q86YW7 130 aa2.52□□□□□ -2.01
VRK1-205ENST00000555402 OR5J2Q8NH18 312 aa2.52□□□□□ -2.01
VRK1-205ENST00000555402 SLC7A6Q92536 515 aa2.52□□□□□ -2.01
VRK1-205ENST00000555402 C20orf166-AS1Q96NR2 134 aa2.52□□□□□ -2.01
VRK1-205ENST00000555402 SMDT1Q9H4I9 107 aa2.52□□□□□ -2.01
VRK1-205ENST00000555402 TUBA4BQ9H853 241 aa2.52□□□□□ -2.01
VRK1-205ENST00000555402 SPANXA1Q9NS26 97 aa2.52□□□□□ -2.01
VRK1-205ENST00000555402 HEY1Q9Y5J3 304 aa2.52□□□□□ -2.01
VRK1-205ENST00000555402 RALGAPA2Q2PPJ7 1873 aa2.52□□□□□ -2.01
VRK1-205ENST00000555402 ERCC6Q03468 1493 aa2.52□□□□□ -2.01
VRK1-205ENST00000555402 UHRF1BP1Q6BDS2 1440 aa2.51□□□□□ -2.01
VRK1-205ENST00000555402 COL18A1P39060 1754 aa2.51□□□□□ -2.01
VRK1-205ENST00000555402 ADAMTSL1Q8N6G6 1762 aa2.51□□□□□ -2.01
VRK1-205ENST00000555402 TRPM3Q9HCF6 1732 aaPredicted RBP2.51□□□□□ -2.01
VRK1-205ENST00000555402 ABCC12Q96J65 1359 aa2.51□□□□□ -2.01
VRK1-205ENST00000555402 DOCK3Q8IZD9 2030 aa2.51□□□□□ -2.01
VRK1-205ENST00000555402 TRBV19A0A075B6N1 114 aa2.51□□□□□ -2.01
VRK1-205ENST00000555402 TRAV9-1A0A075B6T8 112 aa2.51□□□□□ -2.01
VRK1-205ENST00000555402 ARL5CA6NH57 179 aa2.51□□□□□ -2.01
VRK1-205ENST00000555402 C9JCJ5 164 aa2.51□□□□□ -2.01
VRK1-205ENST00000555402 C3orf84H3BNL1 204 aa2.51□□□□□ -2.01
VRK1-205ENST00000555402 OR2J2O76002 312 aa2.51□□□□□ -2.01
VRK1-205ENST00000555402 LY6HO94772 140 aa2.51□□□□□ -2.01
VRK1-205ENST00000555402 SRP19P09132 144 aaKnown RBP2.51□□□□□ -2.01
VRK1-205ENST00000555402 EMP1P54849 157 aa2.51□□□□□ -2.01
VRK1-205ENST00000555402 TSPEAR-AS2P59090 65 aa2.51□□□□□ -2.01
VRK1-205ENST00000555402 BRMS1LQ5PSV4 323 aa2.51□□□□□ -2.01
VRK1-205ENST00000555402 EXOC3-AS1Q8N2X6 119 aa2.51□□□□□ -2.01
VRK1-205ENST00000555402 C12orf45Q8N5I9 185 aaPredicted RBP2.51□□□□□ -2.01
VRK1-205ENST00000555402 PACRGLQ8N7B6 248 aa2.51□□□□□ -2.01
VRK1-205ENST00000555402 DAND5Q8N907 189 aa2.51□□□□□ -2.01
VRK1-205ENST00000555402 MBD3L1Q8WWY6 194 aa2.51□□□□□ -2.01
VRK1-205ENST00000555402 PLEKHB2Q96CS7 222 aa2.51□□□□□ -2.01
VRK1-205ENST00000555402 MALSU1Q96EH3 234 aa2.51□□□□□ -2.01
VRK1-205ENST00000555402 UPK3BQ9BT76 320 aa2.51□□□□□ -2.01
VRK1-205ENST00000555402 CCDC32Q9BV29 185 aa2.51□□□□□ -2.01
VRK1-205ENST00000555402 C20orf27Q9GZN8 174 aa2.51□□□□□ -2.01
VRK1-205ENST00000555402 ASB4Q9Y574 426 aa2.51□□□□□ -2.01
VRK1-205ENST00000555402 ARAP1Q96P48 1450 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms