RNA–Protein interactions for RNA: ENST00000553426.1

LINC00643-202, long intergenic non-protein coding RNA 643, humanhuman

TSL 3 BASIC

Gene LINC00643, Length 526 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-202ENST00000553426 FAM212BQ9NTI7 297 aaPredicted RBP9.55□□□□□ -0.88
LINC00643-202ENST00000553426 COMMD3Q9UBI1 195 aa9.55□□□□□ -0.88
LINC00643-202ENST00000553426 NSG2Q9Y328 171 aa9.55□□□□□ -0.88
LINC00643-202ENST00000553426 NDUFA4O00483 81 aa9.54□□□□□ -0.88
LINC00643-202ENST00000553426 APOC4P55056 127 aa9.54□□□□□ -0.88
LINC00643-202ENST00000553426 PHLDA2Q53GA4 152 aa9.54□□□□□ -0.88
LINC00643-202ENST00000553426 H2BFWTQ7Z2G1 175 aa9.54□□□□□ -0.88
LINC00643-202ENST00000553426 LYSMD2Q8IV50 215 aa9.54□□□□□ -0.88
LINC00643-202ENST00000553426 OR4A16Q8NH70 328 aa9.54□□□□□ -0.88
LINC00643-202ENST00000553426 GPX8Q8TED1 209 aa9.54□□□□□ -0.88
LINC00643-202ENST00000553426 SCARB1Q8WTV0 552 aa9.54□□□□□ -0.88
LINC00643-202ENST00000553426 IGHV3-21A0A0B4J1V1 117 aa9.53□□□□□ -0.88
LINC00643-202ENST00000553426 OR4C46A6NHA9 309 aa9.53□□□□□ -0.88
LINC00643-202ENST00000553426 C15orf61A6NNL5 157 aa9.53□□□□□ -0.88
LINC00643-202ENST00000553426 TSPAN4O14817 238 aa9.53□□□□□ -0.88
LINC00643-202ENST00000553426 NUPL2O15504 423 aaKnown RBP9.53□□□□□ -0.88
LINC00643-202ENST00000553426 EIF4EP06730 217 aaKnown RBP9.53□□□□□ -0.88
LINC00643-202ENST00000553426 RCVRNP35243 200 aa9.53□□□□□ -0.88
LINC00643-202ENST00000553426 RELQ04864 619 aaPredicted RBP9.53□□□□□ -0.88
LINC00643-202ENST00000553426 SNX29P2Q8IUI4 249 aa9.53□□□□□ -0.88
LINC00643-202ENST00000553426 OR1P1Q8NH06 330 aa9.53□□□□□ -0.88
LINC00643-202ENST00000553426 TMEM14BQ9NUH8 114 aa9.53□□□□□ -0.88
LINC00643-202ENST00000553426 C15orf62A8K5M9 175 aa9.52□□□□□ -0.89
LINC00643-202ENST00000553426 K7EMT4 169 aa9.52□□□□□ -0.89
LINC00643-202ENST00000553426 MZT2AQ6P582 158 aa9.52□□□□□ -0.89
LINC00643-202ENST00000553426 TBC1D26Q86UD7 250 aa9.52□□□□□ -0.89
LINC00643-202ENST00000553426 CHRDL1Q9BU40 450 aa9.52□□□□□ -0.89
LINC00643-202ENST00000553426 C6orf62Q9GZU0 229 aaPredicted RBP9.52□□□□□ -0.89
LINC00643-202ENST00000553426 K7EIM0 57 aa9.51□□□□□ -0.89
LINC00643-202ENST00000553426 UBE2CO00762 179 aa9.51□□□□□ -0.89
LINC00643-202ENST00000553426 YIF1AO95070 293 aa9.51□□□□□ -0.89
LINC00643-202ENST00000553426 RORCP51449 518 aa9.51□□□□□ -0.89
LINC00643-202ENST00000553426 MFAP2P55001 183 aa9.51□□□□□ -0.89
LINC00643-202ENST00000553426 MFAP4P55083 255 aa9.51□□□□□ -0.89
LINC00643-202ENST00000553426 UCP3P55916 312 aa9.51□□□□□ -0.89
LINC00643-202ENST00000553426 VBP1P61758 197 aa9.51□□□□□ -0.89
LINC00643-202ENST00000553426 NCS1P62166 190 aa9.51□□□□□ -0.89
LINC00643-202ENST00000553426 ERHP84090 104 aaKnown RBP9.51□□□□□ -0.89
LINC00643-202ENST00000553426 Q6ZWC4 215 aa9.51□□□□□ -0.89
LINC00643-202ENST00000553426 STPG3Q8N7X2 389 aa9.51□□□□□ -0.89
LINC00643-202ENST00000553426 AP3S1Q92572 193 aa9.51□□□□□ -0.89
LINC00643-202ENST00000553426 MISP3Q96FF7 219 aa9.51□□□□□ -0.89
LINC00643-202ENST00000553426 TXN2Q99757 166 aa9.51□□□□□ -0.89
LINC00643-202ENST00000553426 OVOL2Q9BRP0 275 aa9.51□□□□□ -0.89
LINC00643-202ENST00000553426 FUNDC2Q9BWH2 189 aa9.51□□□□□ -0.89
LINC00643-202ENST00000553426 UBQLN2Q9UHD9 624 aa9.51□□□□□ -0.89
LINC00643-202ENST00000553426 FAM25AB3EWG3 89 aa9.5□□□□□ -0.89
LINC00643-202ENST00000553426 FAM25CB3EWG5 89 aa9.5□□□□□ -0.89
LINC00643-202ENST00000553426 FAM25GB3EWG6 89 aa9.5□□□□□ -0.89
LINC00643-202ENST00000553426 ATG12O94817 140 aa9.5□□□□□ -0.89
LINC00643-202ENST00000553426 CTSGP08311 255 aa9.5□□□□□ -0.89
LINC00643-202ENST00000553426 PGAM2P15259 253 aa9.5□□□□□ -0.89
LINC00643-202ENST00000553426 ELK1P19419 428 aa9.5□□□□□ -0.89
LINC00643-202ENST00000553426 BMI1P35226 326 aa9.5□□□□□ -0.89
LINC00643-202ENST00000553426 ADMP35318 185 aa9.5□□□□□ -0.89
LINC00643-202ENST00000553426 CMC4P56277 68 aaPredicted RBP9.5□□□□□ -0.89
LINC00643-202ENST00000553426 HSPE1P61604 102 aaKnown RBP9.5□□□□□ -0.89
LINC00643-202ENST00000553426 ZNF486Q96H40 463 aaPredicted RBP9.5□□□□□ -0.89
LINC00643-202ENST00000553426 SEC22AQ96IW7 307 aa9.5□□□□□ -0.89
LINC00643-202ENST00000553426 TP53TG1Q9Y2A0 90 aa9.5□□□□□ -0.89
LINC00643-202ENST00000553426 HERC2O95714 4834 aa9.49□□□□□ -0.89
LINC00643-202ENST00000553426 IGHV3OR16-8A0A075B7F1 116 aa9.49□□□□□ -0.89
LINC00643-202ENST00000553426 DBX1A6NMT0 343 aa9.49□□□□□ -0.89
LINC00643-202ENST00000553426 SPRY2O43597 315 aa9.49□□□□□ -0.89
LINC00643-202ENST00000553426 ZNF207O43670 478 aaKnown RBP9.49□□□□□ -0.89
LINC00643-202ENST00000553426 GNG7O60262 68 aa9.49□□□□□ -0.89
LINC00643-202ENST00000553426 HPGDSO60760 199 aa9.49□□□□□ -0.89
LINC00643-202ENST00000553426 CTSDP07339 412 aaPredicted RBP9.49□□□□□ -0.89
LINC00643-202ENST00000553426 FCGR2BP31994 310 aaPredicted RBP9.49□□□□□ -0.89
LINC00643-202ENST00000553426 SNCAP37840 140 aa9.49□□□□□ -0.89
LINC00643-202ENST00000553426 PRCDQ00LT1 54 aa9.49□□□□□ -0.89
LINC00643-202ENST00000553426 RNASE10Q5GAN6 216 aaKnown RBP9.49□□□□□ -0.89
LINC00643-202ENST00000553426 ZNF114Q8NC26 417 aa9.49□□□□□ -0.89
LINC00643-202ENST00000553426 TMEM116Q8NCL8 245 aa9.49□□□□□ -0.89
LINC00643-202ENST00000553426 C15orf40Q8WUR7 153 aa9.49□□□□□ -0.89
LINC00643-202ENST00000553426 MRGPRFQ96AM1 343 aa9.49□□□□□ -0.89
LINC00643-202ENST00000553426 PINX1Q96BK5 328 aaKnown RBP9.49□□□□□ -0.89
LINC00643-202ENST00000553426 GALNT14Q96FL9 552 aa9.49□□□□□ -0.89
LINC00643-202ENST00000553426 GINS3Q9BRX5 216 aa9.49□□□□□ -0.89
LINC00643-202ENST00000553426 PDCD10Q9BUL8 212 aa9.49□□□□□ -0.89
LINC00643-202ENST00000553426 SMPXQ9UHP9 88 aa9.49□□□□□ -0.89
LINC00643-202ENST00000553426 TRAV14DV4A0A0A6YYC5 116 aa9.48□□□□□ -0.89
LINC00643-202ENST00000553426 KIR2DL5BA0A0G2JN68 375 aa9.48□□□□□ -0.89
LINC00643-202ENST00000553426 KIR2DL5BA0A0G2JPC4 375 aa9.48□□□□□ -0.89
LINC00643-202ENST00000553426 IGHV7-4-1A0A0J9YVY3 117 aa9.48□□□□□ -0.89
LINC00643-202ENST00000553426 CXorf65A6NEN9 183 aa9.48□□□□□ -0.89
LINC00643-202ENST00000553426 F8W735 103 aaPredicted RBP9.48□□□□□ -0.89
LINC00643-202ENST00000553426 M0QYG6 137 aa9.48□□□□□ -0.89
LINC00643-202ENST00000553426 MT-CO2P00403 227 aa9.48□□□□□ -0.89
LINC00643-202ENST00000553426 CD5P06127 495 aa9.48□□□□□ -0.89
LINC00643-202ENST00000553426 NPBWR1P48145 328 aa9.48□□□□□ -0.89
LINC00643-202ENST00000553426 AKR1C2P52895 323 aa9.48□□□□□ -0.89
LINC00643-202ENST00000553426 PAFAH1B2P68402 229 aa9.48□□□□□ -0.89
LINC00643-202ENST00000553426 WFDC3Q8IUB2 231 aa9.48□□□□□ -0.89
LINC00643-202ENST00000553426 KIR2DL5AQ8N109 375 aa9.48□□□□□ -0.89
LINC00643-202ENST00000553426 ARRDC1Q8N5I2 433 aa9.48□□□□□ -0.89
LINC00643-202ENST00000553426 TMEM217Q8N7C4 229 aa9.48□□□□□ -0.89
LINC00643-202ENST00000553426 KIR2DL5BQ8NHK3 375 aa9.48□□□□□ -0.89
LINC00643-202ENST00000553426 RHPN1-AS1Q9BWJ2 59 aa9.48□□□□□ -0.89
LINC00643-202ENST00000553426 I3L2K1 104 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms