RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 C7orf69Q9H7B7 122 aa15.6■□□□□ 0.09
RBFOX1-215ENST00000553186 WDR83OSQ9Y284 106 aa15.6■□□□□ 0.09
RBFOX1-215ENST00000553186 FGF7P21781 194 aa15.6■□□□□ 0.09
RBFOX1-215ENST00000553186 RPL27AP46776 148 aaKnown RBP15.6■□□□□ 0.09
RBFOX1-215ENST00000553186 LOXL1Q08397 574 aaPredicted RBP15.6■□□□□ 0.09
RBFOX1-215ENST00000553186 ARSJQ5FYB0 599 aaPredicted RBP15.6■□□□□ 0.09
RBFOX1-215ENST00000553186 Q5PR19 223 aa15.6■□□□□ 0.09
RBFOX1-215ENST00000553186 TRAV20A0A0B4J274 112 aa15.59■□□□□ 0.09
RBFOX1-215ENST00000553186 TRAV40A0A0B4J280 105 aa15.59■□□□□ 0.09
RBFOX1-215ENST00000553186 OR13C7P0DN81 318 aa15.59■□□□□ 0.09
RBFOX1-215ENST00000553186 CAMLGP49069 296 aa15.59■□□□□ 0.09
RBFOX1-215ENST00000553186 SERF2P84101 59 aa15.59■□□□□ 0.09
RBFOX1-215ENST00000553186 RUSC1-AS1Q66K80 236 aa15.59■□□□□ 0.09
RBFOX1-215ENST00000553186 TREML4Q6UXN2 200 aa15.59■□□□□ 0.09
RBFOX1-215ENST00000553186 TIMM9Q9Y5J7 89 aa15.59■□□□□ 0.09
RBFOX1-215ENST00000553186 IGHV3OR16-10A0A075B7F0 116 aa15.59■□□□□ 0.09
RBFOX1-215ENST00000553186 PLGLAQ15195 96 aa15.59■□□□□ 0.09
RBFOX1-215ENST00000553186 KRTAP1-3Q8IUG1 177 aa15.59■□□□□ 0.09
RBFOX1-215ENST00000553186 LINC01356Q8N9X3 169 aa15.59■□□□□ 0.09
RBFOX1-215ENST00000553186 FAM213BQ8TBF2 198 aa15.59■□□□□ 0.09
RBFOX1-215ENST00000553186 MARC2Q969Z3 335 aa15.59■□□□□ 0.09
RBFOX1-215ENST00000553186 NPCDR1Q9BY65 106 aa15.59■□□□□ 0.09
RBFOX1-215ENST00000553186 CSMD1Q96PZ7 3565 aa15.58■□□□□ 0.09
RBFOX1-215ENST00000553186 RNF223E7ERA6 249 aa15.58■□□□□ 0.08
RBFOX1-215ENST00000553186 GATA3P23771 443 aa15.58■□□□□ 0.08
RBFOX1-215ENST00000553186 GNB1P62873 340 aa15.58■□□□□ 0.08
RBFOX1-215ENST00000553186 C5orf64Q2M2E5 130 aa15.58■□□□□ 0.08
RBFOX1-215ENST00000553186 FAM120AOSQ5T036 256 aa15.58■□□□□ 0.08
RBFOX1-215ENST00000553186 AKR1C8PQ5T2L2 129 aa15.58■□□□□ 0.08
RBFOX1-215ENST00000553186 P2RX4Q99571 388 aa15.58■□□□□ 0.08
RBFOX1-215ENST00000553186 KIAA1456Q9P272 454 aa15.58■□□□□ 0.08
RBFOX1-215ENST00000553186 TEX22C9J3V5 150 aa15.58■□□□□ 0.08
RBFOX1-215ENST00000553186 I3L521 148 aa15.58■□□□□ 0.08
RBFOX1-215ENST00000553186 IGHV4-38-2P0DP08 117 aa15.58■□□□□ 0.08
RBFOX1-215ENST00000553186 ZNF616Q08AN1 781 aa15.58■□□□□ 0.08
RBFOX1-215ENST00000553186 MAPK1IP1LQ8NDC0 245 aa15.58■□□□□ 0.08
RBFOX1-215ENST00000553186 SRSF12Q8WXF0 261 aaKnown RBP15.58■□□□□ 0.08
RBFOX1-215ENST00000553186 VSIRQ9H7M9 311 aa15.58■□□□□ 0.08
RBFOX1-215ENST00000553186 LSM4Q9Y4Z0 139 aaKnown RBP15.58■□□□□ 0.08
RBFOX1-215ENST00000553186 AVPP01185 164 aa15.57■□□□□ 0.08
RBFOX1-215ENST00000553186 FAM106CPP0CH98 169 aa15.57■□□□□ 0.08
RBFOX1-215ENST00000553186 AREGP15514 252 aa15.57■□□□□ 0.08
RBFOX1-215ENST00000553186 BRD3OSQ6XYD6 125 aa15.57■□□□□ 0.08
RBFOX1-215ENST00000553186 RPRMQ9NS64 109 aa15.57■□□□□ 0.08
RBFOX1-215ENST00000553186 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.57■□□□□ 0.08
RBFOX1-215ENST00000553186 NAV3Q8IVL0 2385 aa15.57■□□□□ 0.08
RBFOX1-215ENST00000553186 SMCO3A2RU48 225 aa15.56■□□□□ 0.08
RBFOX1-215ENST00000553186 FNDC10F2Z333 226 aa15.56■□□□□ 0.08
RBFOX1-215ENST00000553186 TMEM11P17152 192 aa15.56■□□□□ 0.08
RBFOX1-215ENST00000553186 BRS3P32247 399 aa15.56■□□□□ 0.08
RBFOX1-215ENST00000553186 PRSS57Q6UWY2 283 aa15.56■□□□□ 0.08
RBFOX1-215ENST00000553186 NPVFQ9HCQ7 196 aa15.56■□□□□ 0.08
RBFOX1-215ENST00000553186 RAB19A4D1S5 217 aa15.56■□□□□ 0.08
RBFOX1-215ENST00000553186 REG1AP05451 166 aa15.56■□□□□ 0.08
RBFOX1-215ENST00000553186 DPPA3Q6W0C5 159 aa15.56■□□□□ 0.08
RBFOX1-215ENST00000553186 IL34Q6ZMJ4 242 aa15.56■□□□□ 0.08
RBFOX1-215ENST00000553186 NUDT19A8MXV4 375 aa15.55■□□□□ 0.08
RBFOX1-215ENST00000553186 MPDU1O75352 247 aa15.55■□□□□ 0.08
RBFOX1-215ENST00000553186 PVRIGQ6DKI7 326 aa15.55■□□□□ 0.08
RBFOX1-215ENST00000553186 ZNF114Q8NC26 417 aa15.55■□□□□ 0.08
RBFOX1-215ENST00000553186 GCN1Q92616 2671 aaKnown RBP15.55■□□□□ 0.08
RBFOX1-215ENST00000553186 NCBP2LA6PVI3 153 aaKnown RBP15.55■□□□□ 0.08
RBFOX1-215ENST00000553186 SCO1O75880 301 aa15.55■□□□□ 0.08
RBFOX1-215ENST00000553186 APELAP0DMC3 54 aa15.55■□□□□ 0.08
RBFOX1-215ENST00000553186 SUB1P53999 127 aaKnown RBP eCLIP15.55■□□□□ 0.08
RBFOX1-215ENST00000553186 CD69Q07108 199 aa15.55■□□□□ 0.08
RBFOX1-215ENST00000553186 MLANAQ16655 118 aa15.55■□□□□ 0.08
RBFOX1-215ENST00000553186 KLF17Q5JT82 389 aaPredicted RBP15.55■□□□□ 0.08
RBFOX1-215ENST00000553186 ACSM6Q6P461 480 aa15.55■□□□□ 0.08
RBFOX1-215ENST00000553186 MRPL41Q8IXM3 137 aaKnown RBP15.55■□□□□ 0.08
RBFOX1-215ENST00000553186 MGST2Q99735 147 aa15.55■□□□□ 0.08
RBFOX1-215ENST00000553186 RNASEH2CQ8TDP1 164 aaKnown RBP15.54■□□□□ 0.08
RBFOX1-215ENST00000553186 ZANQ9Y493 2812 aa15.54■□□□□ 0.08
RBFOX1-215ENST00000553186 A0A0U1RQK1 487 aa15.53■□□□□ 0.08
RBFOX1-215ENST00000553186 M6PRP20645 277 aa15.53■□□□□ 0.08
RBFOX1-215ENST00000553186 MFAP2P55001 183 aa15.53■□□□□ 0.08
RBFOX1-215ENST00000553186 ELLP55199 621 aaPredicted RBP15.53■□□□□ 0.08
RBFOX1-215ENST00000553186 GAMTQ14353 236 aa15.53■□□□□ 0.08
RBFOX1-215ENST00000553186 ZNF709Q8N972 641 aa15.53■□□□□ 0.08
RBFOX1-215ENST00000553186 CACNG8Q8WXS5 425 aa15.53■□□□□ 0.08
RBFOX1-215ENST00000553186 Q96MF0 132 aa15.53■□□□□ 0.08
RBFOX1-215ENST00000553186 SRSF8Q9BRL6 282 aaKnown RBP15.53■□□□□ 0.08
RBFOX1-215ENST00000553186 MEGF9Q9H1U4 602 aa15.53■□□□□ 0.08
RBFOX1-215ENST00000553186 CNIH1O95406 144 aa15.53■□□□□ 0.08
RBFOX1-215ENST00000553186 TSPAN15O95858 294 aa15.53■□□□□ 0.08
RBFOX1-215ENST00000553186 FXYD3Q14802 87 aa15.53■□□□□ 0.08
RBFOX1-215ENST00000553186 SMUG1Q53HV7 270 aa15.53■□□□□ 0.08
RBFOX1-215ENST00000553186 TMEM41BQ5BJD5 291 aa15.53■□□□□ 0.08
RBFOX1-215ENST00000553186 SPSB3Q6PJ21 355 aa15.53■□□□□ 0.08
RBFOX1-215ENST00000553186 ZNF562Q6V9R5 426 aa15.53■□□□□ 0.08
RBFOX1-215ENST00000553186 Q8N9W7 124 aa15.53■□□□□ 0.08
RBFOX1-215ENST00000553186 GGTLC1Q9BX51 225 aa15.53■□□□□ 0.08
RBFOX1-215ENST00000553186 FNDC4Q9H6D8 234 aaPredicted RBP15.53■□□□□ 0.08
RBFOX1-215ENST00000553186 LOC105371267A0A1B0GV96 52 aa15.52■□□□□ 0.08
RBFOX1-215ENST00000553186 C17orf112F2Z3M2 114 aa15.52■□□□□ 0.08
RBFOX1-215ENST00000553186 AGPAT2O15120 278 aa15.52■□□□□ 0.08
RBFOX1-215ENST00000553186 GPX4P36969 197 aaPredicted RBP15.52■□□□□ 0.08
RBFOX1-215ENST00000553186 SRSF3P84103 164 aaKnown RBP15.52■□□□□ 0.08
RBFOX1-215ENST00000553186 ZNF726P1Q15940 193 aa15.52■□□□□ 0.08
RBFOX1-215ENST00000553186 TEPPQ6URK8 271 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms