RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 MMDQ15546 238 aa15.74■□□□□ 0.11
SSH1-209ENST00000551165 C2orf83Q53S99 150 aa15.74■□□□□ 0.11
SSH1-209ENST00000551165 GCSAMLQ5JQS6 135 aa15.74■□□□□ 0.11
SSH1-209ENST00000551165 PIP4P2Q8N4L2 257 aa15.74■□□□□ 0.11
SSH1-209ENST00000551165 RCC1LQ96I51 464 aaKnown RBP15.74■□□□□ 0.11
SSH1-209ENST00000551165 POLR3KQ9Y2Y1 108 aaPredicted RBP15.74■□□□□ 0.11
SSH1-209ENST00000551165 CD5P06127 495 aa15.73■□□□□ 0.11
SSH1-209ENST00000551165 AREGP15514 252 aa15.73■□□□□ 0.11
SSH1-209ENST00000551165 UBE2E1P51965 193 aa15.73■□□□□ 0.11
SSH1-209ENST00000551165 FGF8P55075 233 aaPredicted RBP15.73■□□□□ 0.11
SSH1-209ENST00000551165 HES1Q14469 280 aa15.73■□□□□ 0.11
SSH1-209ENST00000551165 FFAR4Q5NUL3 377 aa15.73■□□□□ 0.11
SSH1-209ENST00000551165 LCN15Q6UWW0 184 aa15.73■□□□□ 0.11
SSH1-209ENST00000551165 MMD2Q8IY49 270 aa15.73■□□□□ 0.11
SSH1-209ENST00000551165 RARRES2Q99969 163 aa15.73■□□□□ 0.11
SSH1-209ENST00000551165 GGACTQ9BVM4 153 aa15.73■□□□□ 0.11
SSH1-209ENST00000551165 IGLC7A0M8Q6 106 aa15.73■□□□□ 0.11
SSH1-209ENST00000551165 HMGB3O15347 200 aaKnown RBP15.73■□□□□ 0.11
SSH1-209ENST00000551165 SAA4P35542 130 aa15.73■□□□□ 0.11
SSH1-209ENST00000551165 ERHP84090 104 aaKnown RBP15.73■□□□□ 0.11
SSH1-209ENST00000551165 TMEM41BQ5BJD5 291 aa15.73■□□□□ 0.11
SSH1-209ENST00000551165 P2RX4Q99571 388 aa15.73■□□□□ 0.11
SSH1-209ENST00000551165 IGHV3-48P01763 117 aa15.72■□□□□ 0.11
SSH1-209ENST00000551165 APOC3P02656 99 aa15.72■□□□□ 0.11
SSH1-209ENST00000551165 COMPP49747 757 aaPredicted RBP15.72■□□□□ 0.11
SSH1-209ENST00000551165 PAX8Q06710 450 aa15.72■□□□□ 0.11
SSH1-209ENST00000551165 GUK1Q16774 197 aa15.72■□□□□ 0.11
SSH1-209ENST00000551165 HIST2H2BCQ6DN03 193 aa15.72■□□□□ 0.11
SSH1-209ENST00000551165 LSM4Q9Y4Z0 139 aaKnown RBP15.72■□□□□ 0.11
SSH1-209ENST00000551165 CENPVL3A0A0U1RRI6 287 aa15.72■□□□□ 0.11
SSH1-209ENST00000551165 MOSP00540 346 aa15.72■□□□□ 0.11
SSH1-209ENST00000551165 RPL27AP46776 148 aaKnown RBP15.72■□□□□ 0.11
SSH1-209ENST00000551165 FAM120AOSQ5T036 256 aa15.72■□□□□ 0.11
SSH1-209ENST00000551165 MINOS1Q5TGZ0 78 aa15.72■□□□□ 0.11
SSH1-209ENST00000551165 MINOS1-NBL1R4GNA1 71 aa15.72■□□□□ 0.11
SSH1-209ENST00000551165 DOPEY2Q9Y3R5 2298 aa15.71■□□□□ 0.11
SSH1-209ENST00000551165 A0A1W2PN81 502 aa15.71■□□□□ 0.11
SSH1-209ENST00000551165 INS-IGF2F8WCM5 200 aa15.71■□□□□ 0.11
SSH1-209ENST00000551165 ACTL6BO94805 426 aa15.71■□□□□ 0.11
SSH1-209ENST00000551165 CHRNA7P36544 502 aa15.71■□□□□ 0.11
SSH1-209ENST00000551165 PLGLAQ15195 96 aa15.71■□□□□ 0.11
SSH1-209ENST00000551165 DPPA3Q6W0C5 159 aa15.71■□□□□ 0.11
SSH1-209ENST00000551165 CCDC28AQ8IWP9 274 aa15.71■□□□□ 0.11
SSH1-209ENST00000551165 ZNF709Q8N972 641 aa15.71■□□□□ 0.11
SSH1-209ENST00000551165 SSMEM1Q8WWF3 244 aa15.71■□□□□ 0.11
SSH1-209ENST00000551165 NPVFQ9HCQ7 196 aa15.71■□□□□ 0.11
SSH1-209ENST00000551165 IGKV1OR2-108A0A075B7D4 117 aa15.71■□□□□ 0.11
SSH1-209ENST00000551165 PLA2G2AP14555 144 aa15.71■□□□□ 0.11
SSH1-209ENST00000551165 MFAP2P55001 183 aa15.71■□□□□ 0.11
SSH1-209ENST00000551165 CLEC12BQ2HXU8 276 aa15.71■□□□□ 0.11
SSH1-209ENST00000551165 MIC13Q5XKP0 118 aa15.71■□□□□ 0.11
SSH1-209ENST00000551165 RUSC1-AS1Q66K80 236 aa15.71■□□□□ 0.11
SSH1-209ENST00000551165 ATRAIDQ6UW56 229 aa15.71■□□□□ 0.11
SSH1-209ENST00000551165 RNF5Q99942 180 aa15.71■□□□□ 0.11
SSH1-209ENST00000551165 GGTLC1Q9BX51 225 aa15.71■□□□□ 0.11
SSH1-209ENST00000551165 EIF5A2Q9GZV4 153 aaKnown RBP15.71■□□□□ 0.11
SSH1-209ENST00000551165 TEX22C9J3V5 150 aa15.7■□□□□ 0.1
SSH1-209ENST00000551165 NBR2O15453 112 aa15.7■□□□□ 0.1
SSH1-209ENST00000551165 SCAF4O95104 1147 aaKnown RBP15.7■□□□□ 0.1
SSH1-209ENST00000551165 PAX1P15863 534 aa15.7■□□□□ 0.1
SSH1-209ENST00000551165 OR2T6Q8NHC8 308 aa15.7■□□□□ 0.1
SSH1-209ENST00000551165 FNDC4Q9H6D8 234 aaPredicted RBP15.7■□□□□ 0.1
SSH1-209ENST00000551165 SLC25A22Q9H936 323 aa15.7■□□□□ 0.1
SSH1-209ENST00000551165 YIF1AO95070 293 aa15.7■□□□□ 0.1
SSH1-209ENST00000551165 GAMTQ14353 236 aa15.7■□□□□ 0.1
SSH1-209ENST00000551165 OR10G4Q8NGN3 311 aa15.7■□□□□ 0.1
SSH1-209ENST00000551165 OR10G9Q8NGN4 311 aa15.7■□□□□ 0.1
SSH1-209ENST00000551165 OR10G7Q8NGN6 311 aa15.7■□□□□ 0.1
SSH1-209ENST00000551165 ABCA1O95477 2261 aa15.69■□□□□ 0.1
SSH1-209ENST00000551165 APCP25054 2843 aa15.69■□□□□ 0.1
SSH1-209ENST00000551165 HAGHQ16775 308 aa15.69■□□□□ 0.1
SSH1-209ENST00000551165 NPFFO15130 113 aa15.69■□□□□ 0.1
SSH1-209ENST00000551165 SFTA3P0C7M3 94 aa15.69■□□□□ 0.1
SSH1-209ENST00000551165 GUCA2BQ16661 112 aa15.69■□□□□ 0.1
SSH1-209ENST00000551165 CCDC144NLQ6NUI1 221 aa15.69■□□□□ 0.1
SSH1-209ENST00000551165 FAM122CQ6P4D5 195 aa15.69■□□□□ 0.1
SSH1-209ENST00000551165 MAPK1IP1LQ8NDC0 245 aa15.69■□□□□ 0.1
SSH1-209ENST00000551165 NPBQ8NG41 125 aa15.69■□□□□ 0.1
SSH1-209ENST00000551165 SRSF12Q8WXF0 261 aaKnown RBP15.69■□□□□ 0.1
SSH1-209ENST00000551165 MRPL36Q9P0J6 103 aaKnown RBP15.69■□□□□ 0.1
SSH1-209ENST00000551165 TBL2Q9Y4P3 447 aaKnown RBP15.69■□□□□ 0.1
SSH1-209ENST00000551165 C17orf112F2Z3M2 114 aa15.68■□□□□ 0.1
SSH1-209ENST00000551165 NDUFA3O95167 84 aa15.68■□□□□ 0.1
SSH1-209ENST00000551165 PPT1P50897 306 aa15.68■□□□□ 0.1
SSH1-209ENST00000551165 DEFA5Q01523 94 aa15.68■□□□□ 0.1
SSH1-209ENST00000551165 CD69Q07108 199 aa15.68■□□□□ 0.1
SSH1-209ENST00000551165 TEPPQ6URK8 271 aa15.68■□□□□ 0.1
SSH1-209ENST00000551165 COMMD1Q8N668 190 aa15.68■□□□□ 0.1
SSH1-209ENST00000551165 OR2T10Q8NGZ9 312 aa15.68■□□□□ 0.1
SSH1-209ENST00000551165 MBD3L1Q8WWY6 194 aa15.68■□□□□ 0.1
SSH1-209ENST00000551165 FAM103A1Q9BTL3 118 aaKnown RBP15.68■□□□□ 0.1
SSH1-209ENST00000551165 SOX21Q9Y651 276 aaPredicted RBP15.68■□□□□ 0.1
SSH1-209ENST00000551165 F8W036 122 aa15.68■□□□□ 0.1
SSH1-209ENST00000551165 BRD3OSQ6XYD6 125 aa15.68■□□□□ 0.1
SSH1-209ENST00000551165 Q8N6K4 173 aa15.68■□□□□ 0.1
SSH1-209ENST00000551165 MALSU1Q96EH3 234 aa15.68■□□□□ 0.1
SSH1-209ENST00000551165 PXMP4Q9Y6I8 212 aa15.68■□□□□ 0.1
SSH1-209ENST00000551165 ZANQ9Y493 2812 aa15.67■□□□□ 0.1
SSH1-209ENST00000551165 HELZ2Q9BYK8 2649 aaKnown RBP15.67■□□□□ 0.1
SSH1-209ENST00000551165 OOSP1A8MZH6 123 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms