RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 UBE2G2P60604 165 aa0.51□□□□□ -2.33
CCDC38-206ENST00000548771 SKP1P63208 163 aa0.51□□□□□ -2.33
CCDC38-206ENST00000548771 MGAT3Q09327 533 aa0.51□□□□□ -2.33
CCDC38-206ENST00000548771 RSU1Q15404 277 aa0.51□□□□□ -2.33
CCDC38-206ENST00000548771 BATFQ16520 125 aa0.51□□□□□ -2.33
CCDC38-206ENST00000548771 AAED1Q7RTV5 226 aa0.51□□□□□ -2.33
CCDC38-206ENST00000548771 DEFB132Q7Z7B7 95 aa0.51□□□□□ -2.33
CCDC38-206ENST00000548771 COMMD7Q86VX2 200 aa0.51□□□□□ -2.33
CCDC38-206ENST00000548771 TMEM161BQ8NDZ6 487 aa0.51□□□□□ -2.33
CCDC38-206ENST00000548771 WFDC11Q8NEX6 87 aa0.51□□□□□ -2.33
CCDC38-206ENST00000548771 TOPBP1Q92547 1522 aa0.51□□□□□ -2.33
CCDC38-206ENST00000548771 CMTM5Q96DZ9 223 aa0.51□□□□□ -2.33
CCDC38-206ENST00000548771 ATP6V1G3Q96LB4 118 aa0.51□□□□□ -2.33
CCDC38-206ENST00000548771 OR51I2Q9H344 312 aa0.51□□□□□ -2.33
CCDC38-206ENST00000548771 SYNRGQ9UMZ2 1314 aa0.51□□□□□ -2.33
CCDC38-206ENST00000548771 FUT9Q9Y231 359 aa0.51□□□□□ -2.33
CCDC38-206ENST00000548771 NBPF19A0A087WUL8 3843 aa0.51□□□□□ -2.33
CCDC38-206ENST00000548771 CHD6Q8TD26 2715 aa0.51□□□□□ -2.33
CCDC38-206ENST00000548771 MAST4O15021 2626 aa0.51□□□□□ -2.33
CCDC38-206ENST00000548771 RYR1P21817 5038 aa0.5□□□□□ -2.33
CCDC38-206ENST00000548771 TARBP1Q13395 1621 aaKnown RBP0.5□□□□□ -2.33
CCDC38-206ENST00000548771 GLI3P10071 1580 aa0.5□□□□□ -2.33
CCDC38-206ENST00000548771 FRMPD1Q5SYB0 1578 aa0.5□□□□□ -2.33
CCDC38-206ENST00000548771 ZZEF1O43149 2961 aa0.5□□□□□ -2.33
CCDC38-206ENST00000548771 ASH1LQ9NR48 2969 aaKnown RBP0.5□□□□□ -2.33
CCDC38-206ENST00000548771 NCOA1Q15788 1441 aa0.5□□□□□ -2.33
CCDC38-206ENST00000548771 RAD50Q92878 1312 aa0.5□□□□□ -2.33
CCDC38-206ENST00000548771 CHD8Q9HCK8 2581 aa0.5□□□□□ -2.33
CCDC38-206ENST00000548771 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.5□□□□□ -2.33
CCDC38-206ENST00000548771 C1orf232A0A0U1RR37 186 aa0.5□□□□□ -2.33
CCDC38-206ENST00000548771 FAM25EA8MYX2 175 aa0.5□□□□□ -2.33
CCDC38-206ENST00000548771 GOLGA8KD6RF30 607 aa0.5□□□□□ -2.33
CCDC38-206ENST00000548771 YEATS4O95619 227 aa0.5□□□□□ -2.33
CCDC38-206ENST00000548771 IGHV3-7P01780 117 aa0.5□□□□□ -2.33
CCDC38-206ENST00000548771 SHBGP04278 402 aa0.5□□□□□ -2.33
CCDC38-206ENST00000548771 SUPT4H1P63272 117 aaKnown RBP0.5□□□□□ -2.33
CCDC38-206ENST00000548771 TNFAIP6P98066 277 aaPredicted RBP0.5□□□□□ -2.33
CCDC38-206ENST00000548771 RPL18Q07020 188 aaKnown RBP0.5□□□□□ -2.33
CCDC38-206ENST00000548771 TEX36Q5VZQ5 186 aa0.5□□□□□ -2.33
CCDC38-206ENST00000548771 PLEKHG7Q6ZR37 379 aa0.5□□□□□ -2.33
CCDC38-206ENST00000548771 GID4Q8IVV7 300 aa0.5□□□□□ -2.33
CCDC38-206ENST00000548771 ZNF439Q8NDP4 499 aa0.5□□□□□ -2.33
CCDC38-206ENST00000548771 AQP3Q92482 292 aa0.5□□□□□ -2.33
CCDC38-206ENST00000548771 ROPN1LQ96C74 230 aa0.5□□□□□ -2.33
CCDC38-206ENST00000548771 UPF3BQ9BZI7 483 aaKnown RBP0.5□□□□□ -2.33
CCDC38-206ENST00000548771 MAP1LC3AQ9H492 121 aa0.5□□□□□ -2.33
CCDC38-206ENST00000548771 CSMD1Q96PZ7 3565 aa0.5□□□□□ -2.33
CCDC38-206ENST00000548771 SHROOM2Q13796 1616 aa0.49□□□□□ -2.33
CCDC38-206ENST00000548771 MAP3K4Q9Y6R4 1608 aa0.49□□□□□ -2.33
CCDC38-206ENST00000548771 VPS13AQ96RL7 3174 aa0.49□□□□□ -2.33
CCDC38-206ENST00000548771 CEP170BQ9Y4F5 1589 aaPredicted RBP0.49□□□□□ -2.33
CCDC38-206ENST00000548771 CUX1P39880 1505 aa0.49□□□□□ -2.33
CCDC38-206ENST00000548771 ABCC2Q92887 1545 aa0.49□□□□□ -2.33
CCDC38-206ENST00000548771 GRIN2AQ12879 1464 aa0.49□□□□□ -2.33
CCDC38-206ENST00000548771 IFT140Q96RY7 1462 aa0.49□□□□□ -2.33
CCDC38-206ENST00000548771 FANCD2Q9BXW9 1451 aa0.49□□□□□ -2.33
CCDC38-206ENST00000548771 CDK12Q9NYV4 1490 aaPredicted RBP0.49□□□□□ -2.33
CCDC38-206ENST00000548771 LAMA5O15230 3695 aa0.49□□□□□ -2.33
CCDC38-206ENST00000548771 RYR3Q15413 4870 aa0.49□□□□□ -2.33
CCDC38-206ENST00000548771 ZNF292O60281 2723 aa0.49□□□□□ -2.33
CCDC38-206ENST00000548771 TTC21AQ8NDW8 1320 aa0.49□□□□□ -2.33
CCDC38-206ENST00000548771 TRBV6-7A0A0A0MS04 114 aa0.49□□□□□ -2.33
CCDC38-206ENST00000548771 KRT75O95678 551 aa0.49□□□□□ -2.33
CCDC38-206ENST00000548771 C1QAP02745 245 aa0.49□□□□□ -2.33
CCDC38-206ENST00000548771 FGF6P10767 208 aa0.49□□□□□ -2.33
CCDC38-206ENST00000548771 RNASE3P12724 160 aaKnown RBP0.49□□□□□ -2.33
CCDC38-206ENST00000548771 RPS4Y1P22090 263 aaKnown RBP0.49□□□□□ -2.33
CCDC38-206ENST00000548771 MAP2K4P45985 399 aa0.49□□□□□ -2.33
CCDC38-206ENST00000548771 UBE2IP63279 158 aaKnown RBP0.49□□□□□ -2.33
CCDC38-206ENST00000548771 CAV1Q03135 178 aa0.49□□□□□ -2.33
CCDC38-206ENST00000548771 DMTNQ08495 405 aa0.49□□□□□ -2.33
CCDC38-206ENST00000548771 ZNF846Q147U1 533 aa0.49□□□□□ -2.33
CCDC38-206ENST00000548771 GLT8D1Q68CQ7 371 aa0.49□□□□□ -2.33
CCDC38-206ENST00000548771 CLEC6AQ6EIG7 209 aa0.49□□□□□ -2.33
CCDC38-206ENST00000548771 C11orf40Q8WZ69 217 aa0.49□□□□□ -2.33
CCDC38-206ENST00000548771 TMEM106AQ96A25 262 aa0.49□□□□□ -2.33
CCDC38-206ENST00000548771 DIRAS2Q96HU8 199 aa0.49□□□□□ -2.33
CCDC38-206ENST00000548771 HDHD2Q9H0R4 259 aa0.49□□□□□ -2.33
CCDC38-206ENST00000548771 PLEKHJ1Q9NW61 149 aa0.49□□□□□ -2.33
CCDC38-206ENST00000548771 IL36BQ9NZH7 164 aa0.49□□□□□ -2.33
CCDC38-206ENST00000548771 FRYQ5TBA9 3013 aa0.49□□□□□ -2.33
CCDC38-206ENST00000548771 DMXL1Q9Y485 3027 aa0.49□□□□□ -2.33
CCDC38-206ENST00000548771 CACNA1BQ00975 2339 aa0.49□□□□□ -2.33
CCDC38-206ENST00000548771 PDE4DIPQ5VU43 2346 aa0.49□□□□□ -2.33
CCDC38-206ENST00000548771 ADGBQ8N7X0 1667 aa0.49□□□□□ -2.33
CCDC38-206ENST00000548771 SYNJ1O43426 1573 aa0.49□□□□□ -2.33
CCDC38-206ENST00000548771 GLI2P10070 1586 aa0.49□□□□□ -2.33
CCDC38-206ENST00000548771 TTC37Q6PGP7 1564 aa0.49□□□□□ -2.33
CCDC38-206ENST00000548771 COL12A1Q99715 3063 aa0.49□□□□□ -2.33
CCDC38-206ENST00000548771 EPPK1P58107 5090 aaKnown RBP0.48□□□□□ -2.33
CCDC38-206ENST00000548771 TCOF1Q13428 1488 aaKnown RBP0.48□□□□□ -2.33
CCDC38-206ENST00000548771 SPENQ96T58 3664 aaKnown RBP0.48□□□□□ -2.33
CCDC38-206ENST00000548771 XIRP1Q702N8 1843 aaKnown RBP0.48□□□□□ -2.33
CCDC38-206ENST00000548771 BOD1L1Q8NFC6 3051 aa0.48□□□□□ -2.33
CCDC38-206ENST00000548771 BDP1A6H8Y1 2624 aa0.48□□□□□ -2.33
CCDC38-206ENST00000548771 ANKRD17O75179 2603 aaKnown RBP0.48□□□□□ -2.33
CCDC38-206ENST00000548771 TEP1Q99973 2627 aaKnown RBP0.48□□□□□ -2.33
CCDC38-206ENST00000548771 USP24Q9UPU5 2620 aa0.48□□□□□ -2.33
CCDC38-206ENST00000548771 A0A087WX48 190 aa0.48□□□□□ -2.33
CCDC38-206ENST00000548771 FUOMA2VDF0 154 aa0.48□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms