RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 H3BVH4 76 aa10.48□□□□□ -0.73
COL4A6-209ENST00000545689 PRCDQ00LT1 54 aa10.48□□□□□ -0.73
COL4A6-209ENST00000545689 CCL19Q99731 98 aa10.48□□□□□ -0.73
COL4A6-209ENST00000545689 OSTCQ9NRP0 149 aa10.48□□□□□ -0.73
COL4A6-209ENST00000545689 EFNA2O43921 213 aa10.47□□□□□ -0.73
COL4A6-209ENST00000545689 CSRP1P21291 193 aaKnown RBP10.47□□□□□ -0.73
COL4A6-209ENST00000545689 TMEM136Q6ZRR5 245 aa10.47□□□□□ -0.73
COL4A6-209ENST00000545689 FBXL15Q9H469 300 aa10.47□□□□□ -0.73
COL4A6-209ENST00000545689 A0A0G2JLM5 398 aa10.47□□□□□ -0.73
COL4A6-209ENST00000545689 CBLN4Q9NTU7 201 aa10.47□□□□□ -0.73
COL4A6-209ENST00000545689 C1QTNF9BB2RNN3 333 aa10.47□□□□□ -0.73
COL4A6-209ENST00000545689 RNF224P0DH78 156 aa10.47□□□□□ -0.73
COL4A6-209ENST00000545689 PRELID3AQ96N28 172 aa10.47□□□□□ -0.73
COL4A6-209ENST00000545689 MIEN1Q9BRT3 115 aa10.47□□□□□ -0.73
COL4A6-209ENST00000545689 PRDM6Q9NQX0 595 aa10.47□□□□□ -0.73
COL4A6-209ENST00000545689 THSD7BQ9C0I4 1608 aa10.47□□□□□ -0.73
COL4A6-209ENST00000545689 ATP5LO75964 103 aa10.47□□□□□ -0.73
COL4A6-209ENST00000545689 FBXL7Q9UJT9 491 aa10.47□□□□□ -0.73
COL4A6-209ENST00000545689 ZNF414Q96IQ9 312 aa10.47□□□□□ -0.73
COL4A6-209ENST00000545689 WFDC1Q9HC57 220 aa10.47□□□□□ -0.73
COL4A6-209ENST00000545689 WDR83OSQ9Y284 106 aa10.47□□□□□ -0.73
COL4A6-209ENST00000545689 DUTP33316 252 aaKnown RBP10.46□□□□□ -0.73
COL4A6-209ENST00000545689 ATP5J2P56134 94 aa10.46□□□□□ -0.73
COL4A6-209ENST00000545689 FOXL2NBQ6ZUU3 175 aa10.46□□□□□ -0.73
COL4A6-209ENST00000545689 PPP1R27Q86WC6 154 aa10.46□□□□□ -0.73
COL4A6-209ENST00000545689 LINC01560Q8TB33 94 aa10.46□□□□□ -0.73
COL4A6-209ENST00000545689 PNRC2Q9NPJ4 139 aaKnown RBP10.46□□□□□ -0.73
COL4A6-209ENST00000545689 TBL2Q9Y4P3 447 aaKnown RBP10.46□□□□□ -0.73
COL4A6-209ENST00000545689 AUP1Q9Y679 476 aa10.46□□□□□ -0.73
COL4A6-209ENST00000545689 TRBV20OR9-2A0A075B6H5 130 aa10.46□□□□□ -0.73
COL4A6-209ENST00000545689 IGKV1D-33P01593 117 aa10.46□□□□□ -0.73
COL4A6-209ENST00000545689 IGKV1-33P01594 117 aa10.46□□□□□ -0.73
COL4A6-209ENST00000545689 TFPI2P48307 235 aa10.46□□□□□ -0.73
COL4A6-209ENST00000545689 RRN3P1Q2M238 152 aa10.46□□□□□ -0.73
COL4A6-209ENST00000545689 Q6ZS49 121 aa10.46□□□□□ -0.73
COL4A6-209ENST00000545689 FOXI3A8MTJ6 420 aaPredicted RBP10.46□□□□□ -0.73
COL4A6-209ENST00000545689 SOD3P08294 240 aa10.46□□□□□ -0.73
COL4A6-209ENST00000545689 UQCRFS1P47985 274 aa10.46□□□□□ -0.73
COL4A6-209ENST00000545689 FAM159AQ6UWV7 190 aa10.46□□□□□ -0.73
COL4A6-209ENST00000545689 DCTN5Q9BTE1 182 aa10.46□□□□□ -0.73
COL4A6-209ENST00000545689 Q9H3A6 140 aa10.46□□□□□ -0.73
COL4A6-209ENST00000545689 CGB1A6NKQ9 187 aa10.46□□□□□ -0.74
COL4A6-209ENST00000545689 H3BTX0 84 aa10.46□□□□□ -0.74
COL4A6-209ENST00000545689 SLC17A3O00476 420 aa10.46□□□□□ -0.74
COL4A6-209ENST00000545689 CYTL1Q9NRR1 136 aa10.46□□□□□ -0.74
COL4A6-209ENST00000545689 IGKV1-12A0A0C4DH73 117 aa10.46□□□□□ -0.74
COL4A6-209ENST00000545689 TCRBV4S1A1TA0A5B7 111 aa10.46□□□□□ -0.74
COL4A6-209ENST00000545689 A1L4Q6 167 aa10.46□□□□□ -0.74
COL4A6-209ENST00000545689 H7C1H1 209 aa10.46□□□□□ -0.74
COL4A6-209ENST00000545689 IGKV1D-12P01611 117 aa10.46□□□□□ -0.74
COL4A6-209ENST00000545689 ASIPP42127 132 aa10.46□□□□□ -0.74
COL4A6-209ENST00000545689 TMEM42Q69YG0 159 aa10.46□□□□□ -0.74
COL4A6-209ENST00000545689 RNASE6Q93091 150 aaKnown RBP10.46□□□□□ -0.74
COL4A6-209ENST00000545689 ZNF257Q9Y2Q1 563 aa10.46□□□□□ -0.74
COL4A6-209ENST00000545689 IGKV1D-8A0A087WSZ0 117 aa10.45□□□□□ -0.74
COL4A6-209ENST00000545689 IGHV1-18A0A0C4DH31 117 aa10.45□□□□□ -0.74
COL4A6-209ENST00000545689 HIST1H1AQ02539 215 aaPredicted RBP10.45□□□□□ -0.74
COL4A6-209ENST00000545689 GSN-AS1Q9NRJ2 163 aa10.45□□□□□ -0.74
COL4A6-209ENST00000545689 SPRR3Q9UBC9 169 aa10.45□□□□□ -0.74
COL4A6-209ENST00000545689 FOXA2Q9Y261 457 aaPredicted RBP10.45□□□□□ -0.74
COL4A6-209ENST00000545689 TRGV3P03979 118 aa10.45□□□□□ -0.74
COL4A6-209ENST00000545689 PAX1P15863 534 aa10.45□□□□□ -0.74
COL4A6-209ENST00000545689 CIRBPQ14011 172 aaKnown RBP10.45□□□□□ -0.74
COL4A6-209ENST00000545689 TMEM133Q9H2Q1 129 aa10.45□□□□□ -0.74
COL4A6-209ENST00000545689 PINLYPA6NC86 204 aa10.45□□□□□ -0.74
COL4A6-209ENST00000545689 UBE2CO00762 179 aa10.45□□□□□ -0.74
COL4A6-209ENST00000545689 NBR2O15453 112 aa10.45□□□□□ -0.74
COL4A6-209ENST00000545689 PARD6GQ9BYG4 376 aaPredicted RBP10.45□□□□□ -0.74
COL4A6-209ENST00000545689 UNC13CQ8NB66 2214 aa10.45□□□□□ -0.74
COL4A6-209ENST00000545689 QRFPP83859 136 aa10.45□□□□□ -0.74
COL4A6-209ENST00000545689 PEF1Q9UBV8 284 aaKnown RBP10.45□□□□□ -0.74
COL4A6-209ENST00000545689 ZNF256Q9Y2P7 627 aaPredicted RBP10.45□□□□□ -0.74
COL4A6-209ENST00000545689 PLP1P60201 277 aa10.45□□□□□ -0.74
COL4A6-209ENST00000545689 SGK494Q96LW2 274 aa10.45□□□□□ -0.74
COL4A6-209ENST00000545689 DUX5Q96PT3 197 aa10.45□□□□□ -0.74
COL4A6-209ENST00000545689 SLC50A1Q9BRV3 221 aa10.45□□□□□ -0.74
COL4A6-209ENST00000545689 LYL1P12980 280 aa10.44□□□□□ -0.74
COL4A6-209ENST00000545689 SRSF3P84103 164 aaKnown RBP10.44□□□□□ -0.74
COL4A6-209ENST00000545689 CD69Q07108 199 aa10.44□□□□□ -0.74
COL4A6-209ENST00000545689 TET1Q8NFU7 2136 aa10.44□□□□□ -0.74
COL4A6-209ENST00000545689 IL18BPO95998 194 aa10.44□□□□□ -0.74
COL4A6-209ENST00000545689 SUPT4H1P63272 117 aaKnown RBP10.44□□□□□ -0.74
COL4A6-209ENST00000545689 FAM201AQ5SY85 155 aa10.44□□□□□ -0.74
COL4A6-209ENST00000545689 C1QL4Q86Z23 238 aa10.44□□□□□ -0.74
COL4A6-209ENST00000545689 TMEM105Q8N8V8 129 aa10.44□□□□□ -0.74
COL4A6-209ENST00000545689 RAXQ9Y2V3 346 aa10.44□□□□□ -0.74
COL4A6-209ENST00000545689 OR10J3Q5JRS4 329 aa10.44□□□□□ -0.74
COL4A6-209ENST00000545689 WNT10AQ9GZT5 417 aa10.44□□□□□ -0.74
COL4A6-209ENST00000545689 C7orf71A4D174 169 aa10.44□□□□□ -0.74
COL4A6-209ENST00000545689 GFRA3O60609 400 aa10.44□□□□□ -0.74
COL4A6-209ENST00000545689 RAMP3O60896 148 aa10.44□□□□□ -0.74
COL4A6-209ENST00000545689 NAPSAO96009 420 aa10.44□□□□□ -0.74
COL4A6-209ENST00000545689 LEMD1Q68G75 181 aa10.44□□□□□ -0.74
COL4A6-209ENST00000545689 PLSCR4Q9NRQ2 329 aa10.44□□□□□ -0.74
COL4A6-209ENST00000545689 ARTNQ5T4W7 220 aa10.43□□□□□ -0.74
COL4A6-209ENST00000545689 SBF1O95248 1867 aa10.43□□□□□ -0.74
COL4A6-209ENST00000545689 APOHP02749 345 aaPredicted RBP10.43□□□□□ -0.74
COL4A6-209ENST00000545689 SMIM13P0DJ93 91 aa10.43□□□□□ -0.74
COL4A6-209ENST00000545689 TIMP3P35625 211 aa10.43□□□□□ -0.74
COL4A6-209ENST00000545689 TCF23Q7RTU1 214 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms