RNA–Protein interactions for RNA: ENST00000542328.5

ABCB8-222, Transcript of ATP binding cassette subfamily B member 8, human

TSL 2 BASIC

Gene ABCB8, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCB8-222	ENST00000542328	NPIPB3	Q92617	1050 aa		10.22	□□□□□ -0.77
ABCB8-222	ENST00000542328	COQ2	Q96H96	371 aa		10.22	□□□□□ -0.77
ABCB8-222	ENST00000542328	IGKV1D-33	P01593	117 aa		10.22	□□□□□ -0.77
ABCB8-222	ENST00000542328	IGKV1-33	P01594	117 aa		10.22	□□□□□ -0.77
ABCB8-222	ENST00000542328	SMIM17	P0DL12	118 aa		10.22	□□□□□ -0.77
ABCB8-222	ENST00000542328	IGHV1-8	P0DP01	117 aa		10.22	□□□□□ -0.77
ABCB8-222	ENST00000542328	ZNF273	Q14593	569 aa		10.22	□□□□□ -0.77
ABCB8-222	ENST00000542328	DAZAP2	Q15038	168 aa	Predicted RBP	10.22	□□□□□ -0.77
ABCB8-222	ENST00000542328	WDR73	Q6P4I2	378 aa		10.22	□□□□□ -0.77
ABCB8-222	ENST00000542328	OR4A5	Q8NH83	315 aa		10.22	□□□□□ -0.77
ABCB8-222	ENST00000542328	TMPRSS5	Q9H3S3	457 aa		10.22	□□□□□ -0.77
ABCB8-222	ENST00000542328	MED12L	Q86YW9	2145 aa		10.22	□□□□□ -0.77
ABCB8-222	ENST00000542328	SAA2-SAA4	A0A096LPE2	208 aa		10.22	□□□□□ -0.77
ABCB8-222	ENST00000542328	SAA2	P0DJI9	122 aa	Predicted RBP	10.22	□□□□□ -0.77
ABCB8-222	ENST00000542328	PMS2P11	Q13670	270 aa		10.22	□□□□□ -0.77
ABCB8-222	ENST00000542328	FXYD3	Q14802	87 aa		10.22	□□□□□ -0.77
ABCB8-222	ENST00000542328	HS3ST6	Q96QI5	342 aa		10.22	□□□□□ -0.77
ABCB8-222	ENST00000542328	TRAV20	A0A0B4J274	112 aa		10.21	□□□□□ -0.77
ABCB8-222	ENST00000542328	TRAV40	A0A0B4J280	105 aa		10.21	□□□□□ -0.77
ABCB8-222	ENST00000542328	MOS	P00540	346 aa		10.21	□□□□□ -0.77
ABCB8-222	ENST00000542328	CA2	P00918	260 aa		10.21	□□□□□ -0.77
ABCB8-222	ENST00000542328	CRISP2	P16562	243 aa		10.21	□□□□□ -0.77
ABCB8-222	ENST00000542328	MDK	P21741	143 aa	Predicted RBP	10.21	□□□□□ -0.77
ABCB8-222	ENST00000542328	WDR86	Q86TI4	376 aa		10.21	□□□□□ -0.77
ABCB8-222	ENST00000542328	FUT9	Q9Y231	359 aa		10.21	□□□□□ -0.77
ABCB8-222	ENST00000542328	SOD3	P08294	240 aa		10.21	□□□□□ -0.77
ABCB8-222	ENST00000542328	OR4A47	Q6IF82	309 aa		10.21	□□□□□ -0.77
ABCB8-222	ENST00000542328	SLC16A13	Q7RTY0	426 aa		10.21	□□□□□ -0.77
ABCB8-222	ENST00000542328	LHFPL1	Q86WI0	220 aa		10.21	□□□□□ -0.77
ABCB8-222	ENST00000542328	RBM14	Q96PK6	669 aa	Known RBP	10.21	□□□□□ -0.77
ABCB8-222	ENST00000542328	SPOCK3	Q9BQ16	436 aa		10.21	□□□□□ -0.77
ABCB8-222	ENST00000542328	IFT22	Q9H7X7	185 aa		10.21	□□□□□ -0.77
ABCB8-222	ENST00000542328	DNAJC4	Q9NNZ3	241 aa		10.21	□□□□□ -0.77
ABCB8-222	ENST00000542328	PTPN13	Q12923	2485 aa		10.21	□□□□□ -0.77
ABCB8-222	ENST00000542328	ZNF253	O75346	499 aa		10.21	□□□□□ -0.78
ABCB8-222	ENST00000542328	LMO1	P25800	156 aa		10.21	□□□□□ -0.78
ABCB8-222	ENST00000542328		Q5PR19	223 aa		10.21	□□□□□ -0.78
ABCB8-222	ENST00000542328	LHFPL5	Q8TAF8	219 aa		10.21	□□□□□ -0.78
ABCB8-222	ENST00000542328	FBXL15	Q9H469	300 aa		10.21	□□□□□ -0.78
ABCB8-222	ENST00000542328	ARL2-SNX15	V9GYD0	113 aa		10.21	□□□□□ -0.78
ABCB8-222	ENST00000542328	NPIPB11	E5RHQ5	1161 aa		10.21	□□□□□ -0.78
ABCB8-222	ENST00000542328	ERVK11-1	P61568	191 aa		10.21	□□□□□ -0.78
ABCB8-222	ENST00000542328	PRB3	Q04118	309 aa	Predicted RBP	10.21	□□□□□ -0.78
ABCB8-222	ENST00000542328	KRTAP27-1	Q3LI81	207 aa		10.21	□□□□□ -0.78
ABCB8-222	ENST00000542328	CYB5R2	Q6BCY4	276 aa		10.21	□□□□□ -0.78
ABCB8-222	ENST00000542328	RCC1L	Q96I51	464 aa	Known RBP	10.21	□□□□□ -0.78
ABCB8-222	ENST00000542328	MS4A10	Q96PG2	267 aa		10.21	□□□□□ -0.78
ABCB8-222	ENST00000542328	PSMG3	Q9BT73	122 aa	Predicted RBP	10.21	□□□□□ -0.78
ABCB8-222	ENST00000542328		J3KRW8	73 aa		10.2	□□□□□ -0.78
ABCB8-222	ENST00000542328	TOMM20L	Q6UXN7	152 aa		10.2	□□□□□ -0.78
ABCB8-222	ENST00000542328	PRSS3P2	Q8NHM4	247 aa		10.2	□□□□□ -0.78
ABCB8-222	ENST00000542328	TXNDC17	Q9BRA2	123 aa		10.2	□□□□□ -0.78
ABCB8-222	ENST00000542328	DCAF16	Q9NXF7	216 aa		10.2	□□□□□ -0.78
ABCB8-222	ENST00000542328	RANBP2	P49792	3224 aa	Known RBP	10.2	□□□□□ -0.78
ABCB8-222	ENST00000542328	IGHV2-26	A0A0B4J1V2	119 aa		10.2	□□□□□ -0.78
ABCB8-222	ENST00000542328	ORM1	P02763	201 aa		10.2	□□□□□ -0.78
ABCB8-222	ENST00000542328	ARL14EPL	P0DKL9	152 aa		10.2	□□□□□ -0.78
ABCB8-222	ENST00000542328	AMT	P48728	403 aa		10.2	□□□□□ -0.78
ABCB8-222	ENST00000542328	NABP2	Q9BQ15	211 aa		10.2	□□□□□ -0.78
ABCB8-222	ENST00000542328	OOSP1	A8MZH6	123 aa		10.2	□□□□□ -0.78
ABCB8-222	ENST00000542328	SEC14L6	B5MCN3	397 aa		10.2	□□□□□ -0.78
ABCB8-222	ENST00000542328	RBFOX2	O43251	390 aa	Known RBP eCLIP	10.2	□□□□□ -0.78
ABCB8-222	ENST00000542328	C8orf88	P0DMB2	117 aa		10.2	□□□□□ -0.78
ABCB8-222	ENST00000542328	IER3	P46695	156 aa		10.2	□□□□□ -0.78
ABCB8-222	ENST00000542328	ATP5I	P56385	69 aa	Predicted RBP	10.2	□□□□□ -0.78
ABCB8-222	ENST00000542328	LINC01356	Q8N9X3	169 aa		10.2	□□□□□ -0.78
ABCB8-222	ENST00000542328	TNRC6A	Q8NDV7	1962 aa	Known RBP	10.2	□□□□□ -0.78
ABCB8-222	ENST00000542328	PGP	A6NDG6	321 aa		10.19	□□□□□ -0.78
ABCB8-222	ENST00000542328	CSN3	P07498	182 aa		10.19	□□□□□ -0.78
ABCB8-222	ENST00000542328	MINOS1	Q5TGZ0	78 aa		10.19	□□□□□ -0.78
ABCB8-222	ENST00000542328	C5orf24	Q7Z6I8	188 aa		10.19	□□□□□ -0.78
ABCB8-222	ENST00000542328	C5orf17	Q8NAS9	161 aa		10.19	□□□□□ -0.78
ABCB8-222	ENST00000542328	C1orf147	Q96MC9	270 aa	Predicted RBP	10.19	□□□□□ -0.78
ABCB8-222	ENST00000542328	JMJD8	Q96S16	334 aa		10.19	□□□□□ -0.78
ABCB8-222	ENST00000542328	ZNF581	Q9P0T4	197 aa		10.19	□□□□□ -0.78
ABCB8-222	ENST00000542328	MINOS1-NBL1	R4GNA1	71 aa		10.19	□□□□□ -0.78
ABCB8-222	ENST00000542328	TMSB15B	A0A087X1C1	80 aa		10.19	□□□□□ -0.78
ABCB8-222	ENST00000542328	HIST1H1B	P16401	226 aa	Known RBP	10.19	□□□□□ -0.78
ABCB8-222	ENST00000542328	TEX36	Q5VZQ5	186 aa		10.19	□□□□□ -0.78
ABCB8-222	ENST00000542328	VMO1	Q7Z5L0	202 aa		10.19	□□□□□ -0.78
ABCB8-222	ENST00000542328	CLDND2	Q8NHS1	167 aa		10.19	□□□□□ -0.78
ABCB8-222	ENST00000542328	EAF1	Q96JC9	268 aa	Predicted RBP	10.19	□□□□□ -0.78
ABCB8-222	ENST00000542328	C18orf12	Q96KH6	178 aa		10.19	□□□□□ -0.78
ABCB8-222	ENST00000542328	RABAC1	Q9UI14	185 aa		10.19	□□□□□ -0.78
ABCB8-222	ENST00000542328	SNURFL	B1AK76	121 aa		10.19	□□□□□ -0.78
ABCB8-222	ENST00000542328	HIST1H1E	P10412	219 aa	Known RBP	10.19	□□□□□ -0.78
ABCB8-222	ENST00000542328	SUPT4H1	P63272	117 aa	Known RBP	10.19	□□□□□ -0.78
ABCB8-222	ENST00000542328		Q6ZS49	121 aa		10.19	□□□□□ -0.78
ABCB8-222	ENST00000542328	STPG3	Q8N7X2	389 aa		10.19	□□□□□ -0.78
ABCB8-222	ENST00000542328	IGHV3-35	A0A0C4DH35	117 aa		10.19	□□□□□ -0.78
ABCB8-222	ENST00000542328	RAMP3	O60896	148 aa		10.19	□□□□□ -0.78
ABCB8-222	ENST00000542328	OR2J3	O76001	311 aa		10.19	□□□□□ -0.78
ABCB8-222	ENST00000542328	LOXL3	P58215	753 aa		10.19	□□□□□ -0.78
ABCB8-222	ENST00000542328	HLA-DRB5	Q30154	266 aa		10.19	□□□□□ -0.78
ABCB8-222	ENST00000542328	RNF223	E7ERA6	249 aa		10.18	□□□□□ -0.78
ABCB8-222	ENST00000542328	COX19	Q49B96	90 aa		10.18	□□□□□ -0.78
ABCB8-222	ENST00000542328	BPIFA4P	Q86YQ2	179 aa		10.18	□□□□□ -0.78
ABCB8-222	ENST00000542328	PRR14L	Q5THK1	2151 aa		10.18	□□□□□ -0.78
ABCB8-222	ENST00000542328		M0QZK8	103 aa		10.18	□□□□□ -0.78
ABCB8-222	ENST00000542328	GATA3	P23771	443 aa		10.18	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 153.4 ms