RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 PRSS54Q6PEW0 395 aa14.86□□□□□ -0.03
TNFRSF1A-213ENST00000540022 C19orf35Q6ZS72 473 aa14.86□□□□□ -0.03
TNFRSF1A-213ENST00000540022 HSD17B13Q7Z5P4 300 aaPredicted RBP14.86□□□□□ -0.03
TNFRSF1A-213ENST00000540022 CIB3Q96Q77 187 aaPredicted RBP14.86□□□□□ -0.03
TNFRSF1A-213ENST00000540022 TRAV41A0A0B4J266 112 aa14.85□□□□□ -0.03
TNFRSF1A-213ENST00000540022 H3BP45 60 aa14.85□□□□□ -0.03
TNFRSF1A-213ENST00000540022 L7N2F9 121 aa14.85□□□□□ -0.03
TNFRSF1A-213ENST00000540022 PET100P0DJ07 73 aa14.85□□□□□ -0.03
TNFRSF1A-213ENST00000540022 CTRB1P17538 263 aa14.85□□□□□ -0.03
TNFRSF1A-213ENST00000540022 VAMP2P63027 116 aa14.85□□□□□ -0.03
TNFRSF1A-213ENST00000540022 TMEM267Q0VDI3 215 aaPredicted RBP14.85□□□□□ -0.03
TNFRSF1A-213ENST00000540022 CTRB2Q6GPI1 263 aa14.85□□□□□ -0.03
TNFRSF1A-213ENST00000540022 STPG2Q8N412 459 aa14.85□□□□□ -0.03
TNFRSF1A-213ENST00000540022 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.85□□□□□ -0.03
TNFRSF1A-213ENST00000540022 THAP6Q8TBB0 222 aa14.85□□□□□ -0.03
TNFRSF1A-213ENST00000540022 SMIM8Q96KF7 97 aa14.85□□□□□ -0.03
TNFRSF1A-213ENST00000540022 SERTAD4Q9NUC0 356 aa14.85□□□□□ -0.03
TNFRSF1A-213ENST00000540022 PSENENQ9NZ42 101 aa14.85□□□□□ -0.03
TNFRSF1A-213ENST00000540022 ZNF580Q9UK33 172 aa14.85□□□□□ -0.03
TNFRSF1A-213ENST00000540022 PFDN1O60925 122 aa14.84□□□□□ -0.03
TNFRSF1A-213ENST00000540022 LYL1P12980 280 aa14.84□□□□□ -0.03
TNFRSF1A-213ENST00000540022 PVALBP20472 110 aaPredicted RBP14.84□□□□□ -0.03
TNFRSF1A-213ENST00000540022 MRPL41Q8IXM3 137 aaKnown RBP14.84□□□□□ -0.03
TNFRSF1A-213ENST00000540022 TTC9CQ8N5M4 171 aa14.84□□□□□ -0.03
TNFRSF1A-213ENST00000540022 OR5T1Q8NG75 326 aa14.84□□□□□ -0.03
TNFRSF1A-213ENST00000540022 OR2T6Q8NHC8 308 aa14.84□□□□□ -0.03
TNFRSF1A-213ENST00000540022 TMEM68Q96MH6 324 aa14.84□□□□□ -0.03
TNFRSF1A-213ENST00000540022 P2RX4Q99571 388 aa14.84□□□□□ -0.03
TNFRSF1A-213ENST00000540022 TET2Q6N021 2002 aaPredicted RBP14.84□□□□□ -0.03
TNFRSF1A-213ENST00000540022 NPIPB5A8MRT5 1133 aa14.83□□□□□ -0.04
TNFRSF1A-213ENST00000540022 E5RGE8 158 aa14.83□□□□□ -0.04
TNFRSF1A-213ENST00000540022 FBXO24O75426 580 aa14.83□□□□□ -0.04
TNFRSF1A-213ENST00000540022 CRYGCP07315 174 aa14.83□□□□□ -0.04
TNFRSF1A-213ENST00000540022 RNASE2P10153 161 aaKnown RBP14.83□□□□□ -0.04
TNFRSF1A-213ENST00000540022 PPIFP30405 207 aaKnown RBP14.83□□□□□ -0.04
TNFRSF1A-213ENST00000540022 SNCAP37840 140 aa14.83□□□□□ -0.04
TNFRSF1A-213ENST00000540022 TAS2R30P59541 319 aa14.83□□□□□ -0.04
TNFRSF1A-213ENST00000540022 BSXQ3C1V8 233 aa14.83□□□□□ -0.04
TNFRSF1A-213ENST00000540022 SPANXN5Q5MJ07 72 aa14.83□□□□□ -0.04
TNFRSF1A-213ENST00000540022 SLC24A4Q8NFF2 622 aa14.83□□□□□ -0.04
TNFRSF1A-213ENST00000540022 TMEM170AQ8WVE7 144 aa14.83□□□□□ -0.04
TNFRSF1A-213ENST00000540022 OR4C12Q96R67 309 aa14.83□□□□□ -0.04
TNFRSF1A-213ENST00000540022 TENM1Q9UKZ4 2725 aa14.83□□□□□ -0.04
TNFRSF1A-213ENST00000540022 SOX15O60248 233 aa14.82□□□□□ -0.04
TNFRSF1A-213ENST00000540022 TSC22D2O75157 780 aa14.82□□□□□ -0.04
TNFRSF1A-213ENST00000540022 LY86O95711 162 aa14.82□□□□□ -0.04
TNFRSF1A-213ENST00000540022 IFNA10P01566 189 aa14.82□□□□□ -0.04
TNFRSF1A-213ENST00000540022 SLC25A4P12235 298 aa14.82□□□□□ -0.04
TNFRSF1A-213ENST00000540022 RPL23AP62750 156 aaKnown RBP14.82□□□□□ -0.04
TNFRSF1A-213ENST00000540022 OR11H4Q8NGC9 324 aa14.82□□□□□ -0.04
TNFRSF1A-213ENST00000540022 FAM110DQ8TAY7 271 aaPredicted RBP14.82□□□□□ -0.04
TNFRSF1A-213ENST00000540022 WNT10AQ9GZT5 417 aa14.82□□□□□ -0.04
TNFRSF1A-213ENST00000540022 C16orf95Q9H693 158 aa14.82□□□□□ -0.04
TNFRSF1A-213ENST00000540022 U3KQ87 197 aa14.82□□□□□ -0.04
TNFRSF1A-213ENST00000540022 FAM24AA6NFZ4 105 aa14.82□□□□□ -0.04
TNFRSF1A-213ENST00000540022 C15orf62A8K5M9 175 aa14.82□□□□□ -0.04
TNFRSF1A-213ENST00000540022 NDUFA7O95182 113 aa14.82□□□□□ -0.04
TNFRSF1A-213ENST00000540022 PRH1P02810 166 aa14.82□□□□□ -0.04
TNFRSF1A-213ENST00000540022 NPY1RP25929 384 aa14.82□□□□□ -0.04
TNFRSF1A-213ENST00000540022 HTR2BP41595 481 aa14.82□□□□□ -0.04
TNFRSF1A-213ENST00000540022 CAV2P51636 162 aa14.82□□□□□ -0.04
TNFRSF1A-213ENST00000540022 MFAP2P55001 183 aa14.82□□□□□ -0.04
TNFRSF1A-213ENST00000540022 CFHR3Q02985 330 aa14.82□□□□□ -0.04
TNFRSF1A-213ENST00000540022 ZNF114Q8NC26 417 aa14.82□□□□□ -0.04
TNFRSF1A-213ENST00000540022 LINC01006Q8NI28 216 aa14.82□□□□□ -0.04
TNFRSF1A-213ENST00000540022 DCUN1D4Q92564 292 aa14.82□□□□□ -0.04
TNFRSF1A-213ENST00000540022 LYRM2Q9NU23 88 aaPredicted RBP14.82□□□□□ -0.04
TNFRSF1A-213ENST00000540022 DMRT1Q9Y5R6 373 aa14.82□□□□□ -0.04
TNFRSF1A-213ENST00000540022 F11RQ9Y624 299 aaKnown RBP14.82□□□□□ -0.04
TNFRSF1A-213ENST00000540022 FXYD6-FXYD2A0A087WZ82 144 aa14.81□□□□□ -0.04
TNFRSF1A-213ENST00000540022 P2RY1P47900 373 aa14.81□□□□□ -0.04
TNFRSF1A-213ENST00000540022 C2orf83Q53S99 150 aa14.81□□□□□ -0.04
TNFRSF1A-213ENST00000540022 STRAPQ9Y3F4 350 aaKnown RBP14.81□□□□□ -0.04
TNFRSF1A-213ENST00000540022 C1QBP02746 253 aa14.8□□□□□ -0.04
TNFRSF1A-213ENST00000540022 C10orf99Q6UWK7 81 aa14.8□□□□□ -0.04
TNFRSF1A-213ENST00000540022 TMEM14EPQ6UXP3 125 aa14.8□□□□□ -0.04
TNFRSF1A-213ENST00000540022 ZNF329Q86UD4 541 aa14.8□□□□□ -0.04
TNFRSF1A-213ENST00000540022 TMEM252Q8N6L7 170 aa14.8□□□□□ -0.04
TNFRSF1A-213ENST00000540022 OR1P1Q8NH06 330 aa14.8□□□□□ -0.04
TNFRSF1A-213ENST00000540022 PAIP2BQ9ULR5 123 aaKnown RBP14.8□□□□□ -0.04
TNFRSF1A-213ENST00000540022 FBN3Q75N90 2809 aa14.8□□□□□ -0.04
TNFRSF1A-213ENST00000540022 IGSF23A1L1A6 192 aa14.79□□□□□ -0.04
TNFRSF1A-213ENST00000540022 DEFA4P12838 97 aa14.79□□□□□ -0.04
TNFRSF1A-213ENST00000540022 SUB1P53999 127 aaKnown RBP eCLIP14.79□□□□□ -0.04
TNFRSF1A-213ENST00000540022 RPP30P78346 268 aaKnown RBP14.79□□□□□ -0.04
TNFRSF1A-213ENST00000540022 PVRIGQ6DKI7 326 aa14.79□□□□□ -0.04
TNFRSF1A-213ENST00000540022 FANCD2OSQ96PS1 177 aa14.79□□□□□ -0.04
TNFRSF1A-213ENST00000540022 PMS2P5A8MQ11 134 aa14.78□□□□□ -0.04
TNFRSF1A-213ENST00000540022 METTL15P1P0C7V9 234 aa14.78□□□□□ -0.04
TNFRSF1A-213ENST00000540022 HKR1P10072 659 aa14.78□□□□□ -0.04
TNFRSF1A-213ENST00000540022 ATP5IP56385 69 aaPredicted RBP14.78□□□□□ -0.04
TNFRSF1A-213ENST00000540022 SLC25A24Q6NUK1 477 aa14.78□□□□□ -0.04
TNFRSF1A-213ENST00000540022 ZNF546Q86UE3 836 aa14.78□□□□□ -0.04
TNFRSF1A-213ENST00000540022 GON7Q9BXV9 100 aa14.78□□□□□ -0.04
TNFRSF1A-213ENST00000540022 TNFSF18Q9UNG2 199 aa14.78□□□□□ -0.04
TNFRSF1A-213ENST00000540022 IGLV11-55A0A075B6I3 123 aa14.77□□□□□ -0.04
TNFRSF1A-213ENST00000540022 IGLV1-40P01703 118 aa14.77□□□□□ -0.04
TNFRSF1A-213ENST00000540022 OR8U8P0C7N1 319 aa14.77□□□□□ -0.04
TNFRSF1A-213ENST00000540022 RPL12P30050 165 aaKnown RBP14.77□□□□□ -0.04
TNFRSF1A-213ENST00000540022 TMEM65Q6PI78 240 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms