RNA–Protein interactions for RNA: ENST00000539442.1

LEMD3-202, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 932 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-202ENST00000539442 MSGN1A6NI15 193 aa8.43□□□□□ -1.06
LEMD3-202ENST00000539442 TEX22C9J3V5 150 aa8.43□□□□□ -1.06
LEMD3-202ENST00000539442 E7EUB6 86 aa8.43□□□□□ -1.06
LEMD3-202ENST00000539442 H3BP45 60 aa8.43□□□□□ -1.06
LEMD3-202ENST00000539442 KCNAB3O43448 404 aa8.43□□□□□ -1.06
LEMD3-202ENST00000539442 IFNA10P01566 189 aa8.43□□□□□ -1.06
LEMD3-202ENST00000539442 AMY1AP04745 511 aa8.43□□□□□ -1.06
LEMD3-202ENST00000539442 CXCL2P19875 107 aa8.43□□□□□ -1.06
LEMD3-202ENST00000539442 NPY1RP25929 384 aa8.43□□□□□ -1.06
LEMD3-202ENST00000539442 SNCAP37840 140 aa8.43□□□□□ -1.06
LEMD3-202ENST00000539442 SULT1A1P50225 295 aa8.43□□□□□ -1.06
LEMD3-202ENST00000539442 RAB11AP62491 216 aa8.43□□□□□ -1.06
LEMD3-202ENST00000539442 EWSR1Q01844 656 aaKnown RBP eCLIP8.43□□□□□ -1.06
LEMD3-202ENST00000539442 WT1-ASQ06250 92 aa8.43□□□□□ -1.06
LEMD3-202ENST00000539442 LGALSLQ3ZCW2 172 aaPredicted RBP8.43□□□□□ -1.06
LEMD3-202ENST00000539442 LAMTOR1Q6IAA8 161 aa8.43□□□□□ -1.06
LEMD3-202ENST00000539442 STPG2Q8N412 459 aa8.43□□□□□ -1.06
LEMD3-202ENST00000539442 ZNF114Q8NC26 417 aa8.43□□□□□ -1.06
LEMD3-202ENST00000539442 OR10W1Q8NGF6 305 aa8.43□□□□□ -1.06
LEMD3-202ENST00000539442 TMEM68Q96MH6 324 aa8.43□□□□□ -1.06
LEMD3-202ENST00000539442 OR4C12Q96R67 309 aa8.43□□□□□ -1.06
LEMD3-202ENST00000539442 HSPB9Q9BQS6 159 aa8.43□□□□□ -1.06
LEMD3-202ENST00000539442 ZC4H2Q9NQZ6 224 aa8.43□□□□□ -1.06
LEMD3-202ENST00000539442 HSPB11Q9Y547 144 aa8.43□□□□□ -1.06
LEMD3-202ENST00000539442 HIVEP2P31629 2446 aa8.42□□□□□ -1.06
LEMD3-202ENST00000539442 C15orf62A8K5M9 175 aa8.42□□□□□ -1.06
LEMD3-202ENST00000539442 CLDN34H7C241 214 aa8.42□□□□□ -1.06
LEMD3-202ENST00000539442 TAAR5O14804 337 aa8.42□□□□□ -1.06
LEMD3-202ENST00000539442 OR8U8P0C7N1 319 aa8.42□□□□□ -1.06
LEMD3-202ENST00000539442 OR13C7P0DN81 318 aa8.42□□□□□ -1.06
LEMD3-202ENST00000539442 S100A11P31949 105 aa8.42□□□□□ -1.06
LEMD3-202ENST00000539442 CRIP2P52943 208 aaPredicted RBP8.42□□□□□ -1.06
LEMD3-202ENST00000539442 AP2S1P53680 142 aaPredicted RBP8.42□□□□□ -1.06
LEMD3-202ENST00000539442 SUB1P53999 127 aaKnown RBP eCLIP8.42□□□□□ -1.06
LEMD3-202ENST00000539442 HBG1P69891 147 aa8.42□□□□□ -1.06
LEMD3-202ENST00000539442 HBG2P69892 147 aa8.42□□□□□ -1.06
LEMD3-202ENST00000539442 NDPQ00604 133 aa8.42□□□□□ -1.06
LEMD3-202ENST00000539442 C2orf83Q53S99 150 aa8.42□□□□□ -1.06
LEMD3-202ENST00000539442 SGMS2Q8NHU3 365 aa8.42□□□□□ -1.06
LEMD3-202ENST00000539442 ZNF418Q8TF45 676 aaPredicted RBP8.42□□□□□ -1.06
LEMD3-202ENST00000539442 ABHD5Q8WTS1 349 aa8.42□□□□□ -1.06
LEMD3-202ENST00000539442 ARL6Q9H0F7 186 aa8.42□□□□□ -1.06
LEMD3-202ENST00000539442 TNCP24821 2201 aa8.42□□□□□ -1.06
LEMD3-202ENST00000539442 KANTRA0A1W2PQU2 76 aa8.41□□□□□ -1.06
LEMD3-202ENST00000539442 NPIPB5A8MRT5 1133 aa8.41□□□□□ -1.06
LEMD3-202ENST00000539442 ATP6V0E1O15342 81 aa8.41□□□□□ -1.06
LEMD3-202ENST00000539442 BCL2L11O43521 198 aa8.41□□□□□ -1.06
LEMD3-202ENST00000539442 TSPAN9O75954 239 aa8.41□□□□□ -1.06
LEMD3-202ENST00000539442 IGHG2P01859 326 aa8.41□□□□□ -1.06
LEMD3-202ENST00000539442 METTL15P1P0C7V9 234 aa8.41□□□□□ -1.06
LEMD3-202ENST00000539442 RNASE2P10153 161 aaKnown RBP8.41□□□□□ -1.06
LEMD3-202ENST00000539442 AREGP15514 252 aa8.41□□□□□ -1.06
LEMD3-202ENST00000539442 TMEM267Q0VDI3 215 aaPredicted RBP8.41□□□□□ -1.06
LEMD3-202ENST00000539442 TMUB2Q71RG4 321 aa8.41□□□□□ -1.06
LEMD3-202ENST00000539442 OR10P1Q8NGE3 313 aa8.41□□□□□ -1.06
LEMD3-202ENST00000539442 OR1L6Q8NGR2 347 aa8.41□□□□□ -1.06
LEMD3-202ENST00000539442 OR1P1Q8NH06 330 aa8.41□□□□□ -1.06
LEMD3-202ENST00000539442 PINX1Q96BK5 328 aaKnown RBP8.41□□□□□ -1.06
LEMD3-202ENST00000539442 ARPC5LQ9BPX5 153 aa8.41□□□□□ -1.06
LEMD3-202ENST00000539442 NPFFR1Q9GZQ6 430 aa8.41□□□□□ -1.06
LEMD3-202ENST00000539442 GSX1Q9H4S2 264 aaPredicted RBP8.41□□□□□ -1.06
LEMD3-202ENST00000539442 PARP11Q9NR21 331 aa8.41□□□□□ -1.06
LEMD3-202ENST00000539442 ZNF580Q9UK33 172 aa8.41□□□□□ -1.06
LEMD3-202ENST00000539442 PAIP2BQ9ULR5 123 aaKnown RBP8.41□□□□□ -1.06
LEMD3-202ENST00000539442 SONP18583 2426 aaKnown RBP8.4□□□□□ -1.06
LEMD3-202ENST00000539442 DNAJC9-AS1A6NH13 148 aa8.4□□□□□ -1.06
LEMD3-202ENST00000539442 CYSRT1A8MQ03 144 aa8.4□□□□□ -1.06
LEMD3-202ENST00000539442 PMS2P5A8MQ11 134 aa8.4□□□□□ -1.06
LEMD3-202ENST00000539442 INAFM1C9JVW0 142 aa8.4□□□□□ -1.06
LEMD3-202ENST00000539442 CORTO00230 105 aa8.4□□□□□ -1.06
LEMD3-202ENST00000539442 CYB5BO43169 146 aa8.4□□□□□ -1.06
LEMD3-202ENST00000539442 CST7O76096 145 aa8.4□□□□□ -1.06
LEMD3-202ENST00000539442 IFNA4P05014 189 aa8.4□□□□□ -1.06
LEMD3-202ENST00000539442 IGF1P05019 195 aa8.4□□□□□ -1.06
LEMD3-202ENST00000539442 CRYGCP07315 174 aa8.4□□□□□ -1.06
LEMD3-202ENST00000539442 FAM157CP0CG43 387 aa8.4□□□□□ -1.06
LEMD3-202ENST00000539442 EGR2P11161 476 aaPredicted RBP8.4□□□□□ -1.06
LEMD3-202ENST00000539442 CTRB1P17538 263 aa8.4□□□□□ -1.06
LEMD3-202ENST00000539442 RPL15P61313 204 aaKnown RBP8.4□□□□□ -1.06
LEMD3-202ENST00000539442 NHLH2Q02577 135 aa8.4□□□□□ -1.06
LEMD3-202ENST00000539442 OPCMLQ14982 345 aa8.4□□□□□ -1.06
LEMD3-202ENST00000539442 ATP6V1FQ16864 119 aa8.4□□□□□ -1.06
LEMD3-202ENST00000539442 AKIRIN2Q53H80 203 aa8.4□□□□□ -1.06
LEMD3-202ENST00000539442 LCE1DQ5T752 114 aa8.4□□□□□ -1.06
LEMD3-202ENST00000539442 PVRIGQ6DKI7 326 aa8.4□□□□□ -1.06
LEMD3-202ENST00000539442 CTRB2Q6GPI1 263 aa8.4□□□□□ -1.06
LEMD3-202ENST00000539442 ETV3LQ6ZN32 361 aa8.4□□□□□ -1.06
LEMD3-202ENST00000539442 SLC35E3Q7Z769 313 aa8.4□□□□□ -1.06
LEMD3-202ENST00000539442 TTC9CQ8N5M4 171 aa8.4□□□□□ -1.06
LEMD3-202ENST00000539442 OR1S2Q8NGQ3 325 aa8.4□□□□□ -1.06
LEMD3-202ENST00000539442 RNASEH2CQ8TDP1 164 aaKnown RBP8.4□□□□□ -1.06
LEMD3-202ENST00000539442 TMEM170AQ8WVE7 144 aa8.4□□□□□ -1.06
LEMD3-202ENST00000539442 JMJD8Q96S16 334 aa8.4□□□□□ -1.06
LEMD3-202ENST00000539442 P2RX4Q99571 388 aa8.4□□□□□ -1.06
LEMD3-202ENST00000539442 FAM103A1Q9BTL3 118 aaKnown RBP8.4□□□□□ -1.06
LEMD3-202ENST00000539442 TNFRSF19Q9NS68 423 aa8.4□□□□□ -1.06
LEMD3-202ENST00000539442 FBXL17Q9UF56 701 aa8.4□□□□□ -1.06
LEMD3-202ENST00000539442 FBXO7Q9Y3I1 522 aa8.4□□□□□ -1.06
LEMD3-202ENST00000539442 F11RQ9Y624 299 aaKnown RBP8.4□□□□□ -1.06
LEMD3-202ENST00000539442 TET2Q6N021 2002 aaPredicted RBP8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms