RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 A0A1W2PPK0 400 aa7.14□□□□□ -1.27
CSDE1-215ENST00000533818 HLA-DRB4P13762 266 aa7.14□□□□□ -1.27
CSDE1-215ENST00000533818 P2RY1P47900 373 aa7.14□□□□□ -1.27
CSDE1-215ENST00000533818 SNRPD3P62318 126 aaKnown RBP7.14□□□□□ -1.27
CSDE1-215ENST00000533818 WT1-ASQ06250 92 aa7.14□□□□□ -1.27
CSDE1-215ENST00000533818 OR5I1Q13606 314 aa7.14□□□□□ -1.27
CSDE1-215ENST00000533818 FCN2Q15485 313 aa7.14□□□□□ -1.27
CSDE1-215ENST00000533818 TTC23Q5W5X9 447 aa7.14□□□□□ -1.27
CSDE1-215ENST00000533818 RPL22L1Q6P5R6 122 aaKnown RBP7.14□□□□□ -1.27
CSDE1-215ENST00000533818 Q6ZSA8 131 aa7.14□□□□□ -1.27
CSDE1-215ENST00000533818 OR4C16Q8NGL9 310 aa7.14□□□□□ -1.27
CSDE1-215ENST00000533818 RXFP4Q8TDU9 374 aa7.14□□□□□ -1.27
CSDE1-215ENST00000533818 LGALS12Q96DT0 336 aa7.14□□□□□ -1.27
CSDE1-215ENST00000533818 GINS4Q9BRT9 223 aa7.14□□□□□ -1.27
CSDE1-215ENST00000533818 BET1LQ9NYM9 111 aa7.14□□□□□ -1.27
CSDE1-215ENST00000533818 HLA-DRB4X5D2U9 266 aa7.14□□□□□ -1.27
CSDE1-215ENST00000533818 TRAV26-1A0A087WT03 109 aa7.13□□□□□ -1.27
CSDE1-215ENST00000533818 NPIPB6E9PJ23 425 aa7.13□□□□□ -1.27
CSDE1-215ENST00000533818 J3QRK9 145 aa7.13□□□□□ -1.27
CSDE1-215ENST00000533818 TRAPPC2P0DI81 140 aa7.13□□□□□ -1.27
CSDE1-215ENST00000533818 TRAPPC2BP0DI82 140 aa7.13□□□□□ -1.27
CSDE1-215ENST00000533818 POLR2IP36954 125 aaKnown RBP7.13□□□□□ -1.27
CSDE1-215ENST00000533818 SSX1Q16384 188 aa7.13□□□□□ -1.27
CSDE1-215ENST00000533818 KCTD21Q4G0X4 260 aa7.13□□□□□ -1.27
CSDE1-215ENST00000533818 XAF1Q6GPH4 301 aa7.13□□□□□ -1.27
CSDE1-215ENST00000533818 SLC25A46Q96AG3 418 aa7.13□□□□□ -1.27
CSDE1-215ENST00000533818 TXN2Q99757 166 aa7.13□□□□□ -1.27
CSDE1-215ENST00000533818 CMSS1Q9BQ75 279 aaKnown RBP7.13□□□□□ -1.27
CSDE1-215ENST00000533818 CABLES2Q9BTV7 478 aa7.13□□□□□ -1.27
CSDE1-215ENST00000533818 ERVK13-1Q9NX77 482 aa7.13□□□□□ -1.27
CSDE1-215ENST00000533818 A0A0A6YYD4 124 aa7.12□□□□□ -1.27
CSDE1-215ENST00000533818 TRAV3A0A0B4J244 114 aa7.12□□□□□ -1.27
CSDE1-215ENST00000533818 TRBV5-5A0A0J9YX44 114 aa7.12□□□□□ -1.27
CSDE1-215ENST00000533818 A0A0J9YY99 117 aa7.12□□□□□ -1.27
CSDE1-215ENST00000533818 HMGB1P1B2RPK0 211 aaPredicted RBP7.12□□□□□ -1.27
CSDE1-215ENST00000533818 SOCS1O15524 211 aa7.12□□□□□ -1.27
CSDE1-215ENST00000533818 GNG7O60262 68 aa7.12□□□□□ -1.27
CSDE1-215ENST00000533818 UBBP0CG47 229 aa7.12□□□□□ -1.27
CSDE1-215ENST00000533818 DCKP27707 260 aa7.12□□□□□ -1.27
CSDE1-215ENST00000533818 EIF2B2P49770 351 aaKnown RBP7.12□□□□□ -1.27
CSDE1-215ENST00000533818 BRWD1-AS2P59051 145 aa7.12□□□□□ -1.27
CSDE1-215ENST00000533818 TIMM50Q3ZCQ8 353 aa7.12□□□□□ -1.27
CSDE1-215ENST00000533818 CCDC58Q4VC31 144 aa7.12□□□□□ -1.27
CSDE1-215ENST00000533818 HSD17B13Q7Z5P4 300 aaPredicted RBP7.12□□□□□ -1.27
CSDE1-215ENST00000533818 ZNF709Q8N972 641 aa7.12□□□□□ -1.27
CSDE1-215ENST00000533818 TCTEX1D2Q8WW35 142 aa7.12□□□□□ -1.27
CSDE1-215ENST00000533818 GLMPQ8WWB7 406 aa7.12□□□□□ -1.27
CSDE1-215ENST00000533818 MOB3AQ96BX8 217 aa7.12□□□□□ -1.27
CSDE1-215ENST00000533818 TMEM208Q9BTX3 173 aa7.12□□□□□ -1.27
CSDE1-215ENST00000533818 ZFAND3Q9H8U3 227 aa7.12□□□□□ -1.27
CSDE1-215ENST00000533818 ZNF705GA8MUZ8 300 aaPredicted RBP7.11□□□□□ -1.27
CSDE1-215ENST00000533818 FAM90A26D6RGX4 464 aa7.11□□□□□ -1.27
CSDE1-215ENST00000533818 M0QYG6 137 aa7.11□□□□□ -1.27
CSDE1-215ENST00000533818 UPK2O00526 184 aa7.11□□□□□ -1.27
CSDE1-215ENST00000533818 ATP8B1O43520 1251 aa7.11□□□□□ -1.27
CSDE1-215ENST00000533818 IGHV3-48P01763 117 aa7.11□□□□□ -1.27
CSDE1-215ENST00000533818 PRM2P04554 102 aa7.11□□□□□ -1.27
CSDE1-215ENST00000533818 CD37P11049 281 aa7.11□□□□□ -1.27
CSDE1-215ENST00000533818 CD36P16671 472 aa7.11□□□□□ -1.27
CSDE1-215ENST00000533818 M6PRP20645 277 aa7.11□□□□□ -1.27
CSDE1-215ENST00000533818 Q499Y3 187 aa7.11□□□□□ -1.27
CSDE1-215ENST00000533818 GDF5OSQ5U4N7 250 aa7.11□□□□□ -1.27
CSDE1-215ENST00000533818 KDM4DQ6B0I6 523 aa7.11□□□□□ -1.27
CSDE1-215ENST00000533818 THOC7Q6I9Y2 204 aaKnown RBP7.11□□□□□ -1.27
CSDE1-215ENST00000533818 SCXQ7RTU7 201 aa7.11□□□□□ -1.27
CSDE1-215ENST00000533818 AIFM2Q9BRQ8 373 aa7.11□□□□□ -1.27
CSDE1-215ENST00000533818 SLC35B3Q9H1N7 401 aa7.11□□□□□ -1.27
CSDE1-215ENST00000533818 SPATA2Q9UM82 520 aa7.11□□□□□ -1.27
CSDE1-215ENST00000533818 RBMX2Q9Y388 322 aaKnown RBP7.11□□□□□ -1.27
CSDE1-215ENST00000533818 DNAH8Q96JB1 4490 aa7.11□□□□□ -1.27
CSDE1-215ENST00000533818 A0A1B0GU03 582 aa7.1□□□□□ -1.27
CSDE1-215ENST00000533818 EBAG9O00559 213 aa7.1□□□□□ -1.27
CSDE1-215ENST00000533818 DIRAS3O95661 229 aa7.1□□□□□ -1.27
CSDE1-215ENST00000533818 HOXB6P17509 224 aaKnown RBP7.1□□□□□ -1.27
CSDE1-215ENST00000533818 ZNF600Q6ZNG1 722 aa7.1□□□□□ -1.27
CSDE1-215ENST00000533818 H1FOOQ8IZA3 346 aaPredicted RBP7.1□□□□□ -1.27
CSDE1-215ENST00000533818 NKAIN3Q8N8D7 197 aa7.1□□□□□ -1.27
CSDE1-215ENST00000533818 OR4B1Q8NGF8 309 aa7.1□□□□□ -1.27
CSDE1-215ENST00000533818 MISP3Q96FF7 219 aa7.1□□□□□ -1.27
CSDE1-215ENST00000533818 NARS2Q96I59 477 aaKnown RBP7.1□□□□□ -1.27
CSDE1-215ENST00000533818 METTL26Q96S19 204 aa7.1□□□□□ -1.27
CSDE1-215ENST00000533818 HSD17B10Q99714 261 aaKnown RBP7.1□□□□□ -1.27
CSDE1-215ENST00000533818 SLC29A1Q99808 456 aa7.1□□□□□ -1.27
CSDE1-215ENST00000533818 HINT2Q9BX68 163 aa7.1□□□□□ -1.27
CSDE1-215ENST00000533818 KCNK15Q9H427 330 aa7.1□□□□□ -1.27
CSDE1-215ENST00000533818 MSRB1Q9NZV6 116 aa7.1□□□□□ -1.27
CSDE1-215ENST00000533818 TRAV9-2A0A087WT02 112 aa7.09□□□□□ -1.27
CSDE1-215ENST00000533818 TEX50A0A1B0GTY4 177 aa7.09□□□□□ -1.27
CSDE1-215ENST00000533818 I3L2K1 104 aa7.09□□□□□ -1.27
CSDE1-215ENST00000533818 CRYBB3P26998 211 aa7.09□□□□□ -1.27
CSDE1-215ENST00000533818 NKX2-1P43699 371 aaPredicted RBP7.09□□□□□ -1.27
CSDE1-215ENST00000533818 HNRNPA3P51991 378 aaKnown RBP7.09□□□□□ -1.27
CSDE1-215ENST00000533818 AP2S1P53680 142 aaPredicted RBP7.09□□□□□ -1.27
CSDE1-215ENST00000533818 DEFB1P60022 68 aa7.09□□□□□ -1.27
CSDE1-215ENST00000533818 UNC119Q13432 240 aa7.09□□□□□ -1.27
CSDE1-215ENST00000533818 CADM3Q8N126 398 aa7.09□□□□□ -1.27
CSDE1-215ENST00000533818 OR1L8Q8NGR8 309 aa7.09□□□□□ -1.27
CSDE1-215ENST00000533818 TRUB1Q8WWH5 349 aaKnown RBP7.09□□□□□ -1.27
CSDE1-215ENST00000533818 GPHA2Q96T91 129 aa7.09□□□□□ -1.27
CSDE1-215ENST00000533818 SEPSECSQ9HD40 501 aaKnown RBP7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms