RNA–Protein interactions for RNA: ENST00000531041.1

SF3B2-211, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 1 (best)

Gene SF3B2, Length 1,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-211ENST00000531041 MED6O75586 246 aa13.2□□□□□ -0.3
SF3B2-211ENST00000531041 HOXA1P49639 335 aaPredicted RBP13.2□□□□□ -0.3
SF3B2-211ENST00000531041 C11orf44Q8N8P7 122 aa13.2□□□□□ -0.3
SF3B2-211ENST00000531041 ZNF114Q8NC26 417 aa13.2□□□□□ -0.3
SF3B2-211ENST00000531041 RBKSQ9H477 322 aa13.2□□□□□ -0.3
SF3B2-211ENST00000531041 ENY2Q9NPA8 101 aa13.2□□□□□ -0.3
SF3B2-211ENST00000531041 ZNF355PQ9NSJ1 428 aa13.2□□□□□ -0.3
SF3B2-211ENST00000531041 ZFP57Q9NU63 452 aa13.2□□□□□ -0.3
SF3B2-211ENST00000531041 TRBV9A0A0B4J1U6 114 aa13.19□□□□□ -0.3
SF3B2-211ENST00000531041 GOSR2O14653 212 aa13.19□□□□□ -0.3
SF3B2-211ENST00000531041 RPLP1P05386 114 aaKnown RBP13.19□□□□□ -0.3
SF3B2-211ENST00000531041 DEFA4P12838 97 aa13.19□□□□□ -0.3
SF3B2-211ENST00000531041 NKX2-1P43699 371 aaPredicted RBP13.19□□□□□ -0.3
SF3B2-211ENST00000531041 LCNL1Q6ZST4 164 aa13.19□□□□□ -0.3
SF3B2-211ENST00000531041 MS4A10Q96PG2 267 aa13.19□□□□□ -0.3
SF3B2-211ENST00000531041 FANCD2OSQ96PS1 177 aa13.19□□□□□ -0.3
SF3B2-211ENST00000531041 CITED2Q99967 270 aaPredicted RBP13.19□□□□□ -0.3
SF3B2-211ENST00000531041 GSKIPQ9P0R6 139 aa13.19□□□□□ -0.3
SF3B2-211ENST00000531041 F11RQ9Y624 299 aaKnown RBP13.19□□□□□ -0.3
SF3B2-211ENST00000531041 TCRBV4S1A1TA0A5B7 111 aa13.18□□□□□ -0.3
SF3B2-211ENST00000531041 CYB5BO43169 146 aa13.18□□□□□ -0.3
SF3B2-211ENST00000531041 PRH1P02810 166 aa13.18□□□□□ -0.3
SF3B2-211ENST00000531041 TRGV3P03979 118 aa13.18□□□□□ -0.3
SF3B2-211ENST00000531041 HIST1H1BP16401 226 aaKnown RBP13.18□□□□□ -0.3
SF3B2-211ENST00000531041 TPPP2P59282 170 aa13.18□□□□□ -0.3
SF3B2-211ENST00000531041 KIAA0141Q14154 515 aaPredicted RBP13.18□□□□□ -0.3
SF3B2-211ENST00000531041 SHISA2Q6UWI4 295 aa13.18□□□□□ -0.3
SF3B2-211ENST00000531041 C19orf35Q6ZS72 473 aa13.18□□□□□ -0.3
SF3B2-211ENST00000531041 OR1L6Q8NGR2 347 aa13.18□□□□□ -0.3
SF3B2-211ENST00000531041 OR1P1Q8NH06 330 aa13.18□□□□□ -0.3
SF3B2-211ENST00000531041 DTD1Q8TEA8 209 aa13.18□□□□□ -0.3
SF3B2-211ENST00000531041 P2RX4Q99571 388 aa13.18□□□□□ -0.3
SF3B2-211ENST00000531041 HIPK2Q9H2X6 1198 aa13.18□□□□□ -0.3
SF3B2-211ENST00000531041 HEYLQ9NQ87 328 aaPredicted RBP13.18□□□□□ -0.3
SF3B2-211ENST00000531041 TSSC4Q9Y5U2 329 aaPredicted RBP13.18□□□□□ -0.3
SF3B2-211ENST00000531041 IGLV11-55A0A075B6I3 123 aa13.17□□□□□ -0.3
SF3B2-211ENST00000531041 SYNGR2O43760 224 aa13.17□□□□□ -0.3
SF3B2-211ENST00000531041 SNCAP37840 140 aa13.17□□□□□ -0.3
SF3B2-211ENST00000531041 CDX1P47902 265 aaPredicted RBP13.17□□□□□ -0.3
SF3B2-211ENST00000531041 IL15RAQ13261 267 aa13.17□□□□□ -0.3
SF3B2-211ENST00000531041 BSXQ3C1V8 233 aa13.17□□□□□ -0.3
SF3B2-211ENST00000531041 NDUFA11Q86Y39 141 aa13.17□□□□□ -0.3
SF3B2-211ENST00000531041 ZNF491Q8N8L2 437 aa13.17□□□□□ -0.3
SF3B2-211ENST00000531041 UBE2E2Q96LR5 201 aa13.17□□□□□ -0.3
SF3B2-211ENST00000531041 MED28Q9H204 178 aa13.17□□□□□ -0.3
SF3B2-211ENST00000531041 MGAT4CQ9UBM8 478 aa13.17□□□□□ -0.3
SF3B2-211ENST00000531041 DMRT1Q9Y5R6 373 aa13.17□□□□□ -0.3
SF3B2-211ENST00000531041 FAM223BA6NKX1 122 aa13.16□□□□□ -0.3
SF3B2-211ENST00000531041 SIX6O95475 246 aa13.16□□□□□ -0.3
SF3B2-211ENST00000531041 RNASE2P10153 161 aaKnown RBP13.16□□□□□ -0.3
SF3B2-211ENST00000531041 HTR2BP41595 481 aa13.16□□□□□ -0.3
SF3B2-211ENST00000531041 SUB1P53999 127 aaKnown RBP eCLIP13.16□□□□□ -0.3
SF3B2-211ENST00000531041 MFAP2P55001 183 aa13.16□□□□□ -0.3
SF3B2-211ENST00000531041 H2BFSP57053 126 aa13.16□□□□□ -0.3
SF3B2-211ENST00000531041 RPL23AP62750 156 aaKnown RBP13.16□□□□□ -0.3
SF3B2-211ENST00000531041 RHOGP84095 191 aa13.16□□□□□ -0.3
SF3B2-211ENST00000531041 FAM223AQ8IWN6 122 aa13.16□□□□□ -0.3
SF3B2-211ENST00000531041 NECAP1Q8NC96 275 aa13.16□□□□□ -0.3
SF3B2-211ENST00000531041 USMG5Q96IX5 58 aa13.16□□□□□ -0.3
SF3B2-211ENST00000531041 CIB3Q96Q77 187 aaPredicted RBP13.16□□□□□ -0.3
SF3B2-211ENST00000531041 NMES1Q9C002 83 aa13.16□□□□□ -0.3
SF3B2-211ENST00000531041 MAGT1Q9H0U3 335 aa13.16□□□□□ -0.3
SF3B2-211ENST00000531041 A0A0G2JLM5 398 aa13.15□□□□□ -0.3
SF3B2-211ENST00000531041 ADARB2-AS1A8MUL3 147 aa13.15□□□□□ -0.3
SF3B2-211ENST00000531041 LY86O95711 162 aa13.15□□□□□ -0.3
SF3B2-211ENST00000531041 MBPP02686 304 aaPredicted RBP13.15□□□□□ -0.3
SF3B2-211ENST00000531041 RRAS2P62070 204 aaPredicted RBP13.15□□□□□ -0.3
SF3B2-211ENST00000531041 POLR2GP62487 172 aaKnown RBP eCLIP13.15□□□□□ -0.3
SF3B2-211ENST00000531041 CYCSP99999 105 aaKnown RBP13.15□□□□□ -0.3
SF3B2-211ENST00000531041 PVRIGQ6DKI7 326 aa13.15□□□□□ -0.3
SF3B2-211ENST00000531041 HIST2H2BDQ6DRA6 164 aa13.15□□□□□ -0.3
SF3B2-211ENST00000531041 SLC25A24Q6NUK1 477 aa13.15□□□□□ -0.3
SF3B2-211ENST00000531041 SPATA3Q8NHX4 192 aa13.15□□□□□ -0.3
SF3B2-211ENST00000531041 THYN1Q9P016 225 aa13.15□□□□□ -0.3
SF3B2-211ENST00000531041 U3KQ87 197 aa13.15□□□□□ -0.3
SF3B2-211ENST00000531041 WRBO00258 174 aa13.14□□□□□ -0.31
SF3B2-211ENST00000531041 OR2J3O76001 311 aa13.14□□□□□ -0.31
SF3B2-211ENST00000531041 SCGB1D2O95969 90 aa13.14□□□□□ -0.31
SF3B2-211ENST00000531041 ATP5IP56385 69 aaPredicted RBP13.14□□□□□ -0.31
SF3B2-211ENST00000531041 C2orf83Q53S99 150 aa13.14□□□□□ -0.31
SF3B2-211ENST00000531041 KHDC1LQ5JSQ8 128 aa13.14□□□□□ -0.31
SF3B2-211ENST00000531041 C11orf87Q6NUJ2 197 aa13.14□□□□□ -0.31
SF3B2-211ENST00000531041 SLC24A4Q8NFF2 622 aa13.14□□□□□ -0.31
SF3B2-211ENST00000531041 FBXL7Q9UJT9 491 aa13.14□□□□□ -0.31
SF3B2-211ENST00000531041 NDUFB8O95169 186 aa13.13□□□□□ -0.31
SF3B2-211ENST00000531041 IAPPP10997 89 aa13.13□□□□□ -0.31
SF3B2-211ENST00000531041 CXCL3P19876 107 aa13.13□□□□□ -0.31
SF3B2-211ENST00000531041 FCN2Q15485 313 aa13.13□□□□□ -0.31
SF3B2-211ENST00000531041 Q6ZNX1 250 aa13.13□□□□□ -0.31
SF3B2-211ENST00000531041 NOXA1Q86UR1 476 aa13.13□□□□□ -0.31
SF3B2-211ENST00000531041 OR11H7Q8NGC8 314 aa13.13□□□□□ -0.31
SF3B2-211ENST00000531041 RAB40CQ96S21 281 aa13.13□□□□□ -0.31
SF3B2-211ENST00000531041 RCL1Q9Y2P8 373 aaKnown RBP13.13□□□□□ -0.31
SF3B2-211ENST00000531041 K7EPK0 472 aa13.13□□□□□ -0.31
SF3B2-211ENST00000531041 CORTO00230 105 aa13.13□□□□□ -0.31
SF3B2-211ENST00000531041 SSSCA1O60232 199 aa13.13□□□□□ -0.31
SF3B2-211ENST00000531041 IFNA10P01566 189 aa13.13□□□□□ -0.31
SF3B2-211ENST00000531041 NPY1RP25929 384 aa13.13□□□□□ -0.31
SF3B2-211ENST00000531041 DEFA5Q01523 94 aa13.13□□□□□ -0.31
SF3B2-211ENST00000531041 ATP5G2Q06055 141 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms