RNA–Protein interactions for RNA: ENST00000518919.1

CTNNA1-212, Transcript of catenin alpha 1, humanhuman

TSL 1 (best)

Gene CTNNA1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-212ENST00000518919 ZZEF1O43149 2961 aa3.84□□□□□ -1.8
CTNNA1-212ENST00000518919 ROS1P08922 2347 aa3.83□□□□□ -1.8
CTNNA1-212ENST00000518919 ANKHD1Q8IWZ3 2542 aaKnown RBP3.83□□□□□ -1.8
CTNNA1-212ENST00000518919 NBEAQ8NFP9 2946 aa3.83□□□□□ -1.8
CTNNA1-212ENST00000518919 ADGRG4Q8IZF6 3080 aa3.83□□□□□ -1.8
CTNNA1-212ENST00000518919 RNF212BA8MTL3 300 aa3.83□□□□□ -1.8
CTNNA1-212ENST00000518919 DEFB108AA8MXU0 73 aa3.83□□□□□ -1.8
CTNNA1-212ENST00000518919 C9JQL5 133 aa3.83□□□□□ -1.8
CTNNA1-212ENST00000518919 H3BP45 60 aa3.83□□□□□ -1.8
CTNNA1-212ENST00000518919 WRBO00258 174 aa3.83□□□□□ -1.8
CTNNA1-212ENST00000518919 CHST1O43916 411 aa3.83□□□□□ -1.8
CTNNA1-212ENST00000518919 GYPAP02724 150 aa3.83□□□□□ -1.8
CTNNA1-212ENST00000518919 OR4A8P0C604 315 aa3.83□□□□□ -1.8
CTNNA1-212ENST00000518919 SEC11BP0C7V7 166 aa3.83□□□□□ -1.8
CTNNA1-212ENST00000518919 PVALBP20472 110 aaPredicted RBP3.83□□□□□ -1.8
CTNNA1-212ENST00000518919 OMGP23515 440 aa3.83□□□□□ -1.8
CTNNA1-212ENST00000518919 ATP6V0CP27449 155 aa3.83□□□□□ -1.8
CTNNA1-212ENST00000518919 FCGR2BP31994 310 aaPredicted RBP3.83□□□□□ -1.8
CTNNA1-212ENST00000518919 GPR183P32249 361 aa3.83□□□□□ -1.8
CTNNA1-212ENST00000518919 G6PCP35575 357 aa3.83□□□□□ -1.8
CTNNA1-212ENST00000518919 UCNP55089 124 aa3.83□□□□□ -1.8
CTNNA1-212ENST00000518919 RUNX1Q01196 453 aa3.83□□□□□ -1.8
CTNNA1-212ENST00000518919 CATR1Q13166 79 aa3.83□□□□□ -1.8
CTNNA1-212ENST00000518919 GUCA2BQ16661 112 aa3.83□□□□□ -1.8
CTNNA1-212ENST00000518919 C10orf91Q5T1B1 145 aa3.83□□□□□ -1.8
CTNNA1-212ENST00000518919 EIF5AL1Q6IS14 154 aaKnown RBP3.83□□□□□ -1.8
CTNNA1-212ENST00000518919 ZNF525Q8N782 197 aa3.83□□□□□ -1.8
CTNNA1-212ENST00000518919 ZNF439Q8NDP4 499 aa3.83□□□□□ -1.8
CTNNA1-212ENST00000518919 OR5C1Q8NGR4 320 aa3.83□□□□□ -1.8
CTNNA1-212ENST00000518919 RNASE11Q8TAA1 199 aaKnown RBP3.83□□□□□ -1.8
CTNNA1-212ENST00000518919 SUN5Q8TC36 379 aa3.83□□□□□ -1.8
CTNNA1-212ENST00000518919 PINX1Q96BK5 328 aaKnown RBP3.83□□□□□ -1.8
CTNNA1-212ENST00000518919 NARS2Q96I59 477 aaKnown RBP3.83□□□□□ -1.8
CTNNA1-212ENST00000518919 PRAC1Q96KF2 57 aa3.83□□□□□ -1.8
CTNNA1-212ENST00000518919 WFIKKN1Q96NZ8 548 aa3.83□□□□□ -1.8
CTNNA1-212ENST00000518919 OR4C12Q96R67 309 aa3.83□□□□□ -1.8
CTNNA1-212ENST00000518919 CCL13Q99616 98 aa3.83□□□□□ -1.8
CTNNA1-212ENST00000518919 ATP5SQ99766 215 aa3.83□□□□□ -1.8
CTNNA1-212ENST00000518919 NDUFAF3Q9BU61 184 aa3.83□□□□□ -1.8
CTNNA1-212ENST00000518919 SLC25A31Q9H0C2 315 aa3.83□□□□□ -1.8
CTNNA1-212ENST00000518919 NCOR1P1Q9H4R4 102 aa3.83□□□□□ -1.8
CTNNA1-212ENST00000518919 C19orf12Q9NSK7 152 aa3.83□□□□□ -1.8
CTNNA1-212ENST00000518919 COA4Q9NYJ1 87 aa3.83□□□□□ -1.8
CTNNA1-212ENST00000518919 CARHSP1Q9Y2V2 147 aaKnown RBP3.83□□□□□ -1.8
CTNNA1-212ENST00000518919 MMP24Q9Y5R2 645 aa3.83□□□□□ -1.8
CTNNA1-212ENST00000518919 ZGRF1Q86YA3 2104 aa3.83□□□□□ -1.8
CTNNA1-212ENST00000518919 CACNA1DQ01668 2161 aa3.83□□□□□ -1.8
CTNNA1-212ENST00000518919 USF3Q68DE3 2245 aa3.83□□□□□ -1.8
CTNNA1-212ENST00000518919 PKDREJQ9NTG1 2253 aa3.83□□□□□ -1.8
CTNNA1-212ENST00000518919 SPTBN4Q9H254 2564 aa3.83□□□□□ -1.8
CTNNA1-212ENST00000518919 CHD8Q9HCK8 2581 aa3.82□□□□□ -1.8
CTNNA1-212ENST00000518919 PCNX1Q96RV3 2341 aa3.82□□□□□ -1.8
CTNNA1-212ENST00000518919 PIGBOS1A0A0B4J2F0 54 aa3.82□□□□□ -1.8
CTNNA1-212ENST00000518919 TRGV8A0A0C4DH27 118 aa3.82□□□□□ -1.8
CTNNA1-212ENST00000518919 KBTBD11-OT1A0A1B0GTJ5 212 aa3.82□□□□□ -1.8
CTNNA1-212ENST00000518919 FAM74A7A6NL05 159 aa3.82□□□□□ -1.8
CTNNA1-212ENST00000518919 E7EQL1 145 aa3.82□□□□□ -1.8
CTNNA1-212ENST00000518919 M0R1X1 148 aa3.82□□□□□ -1.8
CTNNA1-212ENST00000518919 DNASE2O00115 360 aaPredicted RBP3.82□□□□□ -1.8
CTNNA1-212ENST00000518919 TOR1AO14656 332 aa3.82□□□□□ -1.8
CTNNA1-212ENST00000518919 RAB29O14966 203 aa3.82□□□□□ -1.8
CTNNA1-212ENST00000518919 AGPAT2O15120 278 aa3.82□□□□□ -1.8
CTNNA1-212ENST00000518919 PPIHO43447 177 aaKnown RBP3.82□□□□□ -1.8
CTNNA1-212ENST00000518919 SYNGR2O43760 224 aa3.82□□□□□ -1.8
CTNNA1-212ENST00000518919 YPEL1O60688 119 aa3.82□□□□□ -1.8
CTNNA1-212ENST00000518919 MMP23AO75900 390 aa3.82□□□□□ -1.8
CTNNA1-212ENST00000518919 ATG12O94817 140 aa3.82□□□□□ -1.8
CTNNA1-212ENST00000518919 CLDN1O95832 211 aa3.82□□□□□ -1.8
CTNNA1-212ENST00000518919 IGHV3-7P01780 117 aa3.82□□□□□ -1.8
CTNNA1-212ENST00000518919 APOC3P02656 99 aa3.82□□□□□ -1.8
CTNNA1-212ENST00000518919 CD5P06127 495 aa3.82□□□□□ -1.8
CTNNA1-212ENST00000518919 OR9G9P0C7N8 305 aa3.82□□□□□ -1.8
CTNNA1-212ENST00000518919 METTL15P1P0C7V9 234 aa3.82□□□□□ -1.8
CTNNA1-212ENST00000518919 M6PRP20645 277 aa3.82□□□□□ -1.8
CTNNA1-212ENST00000518919 LOXP28300 417 aaPredicted RBP3.82□□□□□ -1.8
CTNNA1-212ENST00000518919 CA7P43166 264 aa3.82□□□□□ -1.8
CTNNA1-212ENST00000518919 SULT1A1P50225 295 aa3.82□□□□□ -1.8
CTNNA1-212ENST00000518919 ARHGDIBP52566 201 aa3.82□□□□□ -1.8
CTNNA1-212ENST00000518919 EDDM3BP56851 147 aa3.82□□□□□ -1.8
CTNNA1-212ENST00000518919 LINC01547P58512 204 aaPredicted RBP3.82□□□□□ -1.8
CTNNA1-212ENST00000518919 TAS2R30P59541 319 aa3.82□□□□□ -1.8
CTNNA1-212ENST00000518919 RPL23AP62750 156 aaKnown RBP3.82□□□□□ -1.8
CTNNA1-212ENST00000518919 CCL8P80075 99 aa3.82□□□□□ -1.8
CTNNA1-212ENST00000518919 TNFRSF9Q07011 255 aa3.82□□□□□ -1.8
CTNNA1-212ENST00000518919 ZNF266Q14584 549 aa3.82□□□□□ -1.8
CTNNA1-212ENST00000518919 MAJINQ3KP22 176 aa3.82□□□□□ -1.8
CTNNA1-212ENST00000518919 FAM74A3Q4VXF1 159 aa3.82□□□□□ -1.8
CTNNA1-212ENST00000518919 MORN2Q502X0 79 aa3.82□□□□□ -1.8
CTNNA1-212ENST00000518919 RPL39P5Q59GN2 51 aa3.82□□□□□ -1.8
CTNNA1-212ENST00000518919 NCMAPQ5T1S8 102 aa3.82□□□□□ -1.8
CTNNA1-212ENST00000518919 PRAMEF5Q5TYX0 476 aa3.82□□□□□ -1.8
CTNNA1-212ENST00000518919 NCR3LG1Q68D85 454 aa3.82□□□□□ -1.8
CTNNA1-212ENST00000518919 TMEM14EPQ6UXP3 125 aa3.82□□□□□ -1.8
CTNNA1-212ENST00000518919 SPAG16Q8N0X2 631 aa3.82□□□□□ -1.8
CTNNA1-212ENST00000518919 PUSL1Q8N0Z8 303 aaKnown RBP3.82□□□□□ -1.8
CTNNA1-212ENST00000518919 ZCCHC24Q8N2G6 241 aaKnown RBP3.82□□□□□ -1.8
CTNNA1-212ENST00000518919 ZNF561Q8N587 486 aa3.82□□□□□ -1.8
CTNNA1-212ENST00000518919 TCTEX1D1Q8N7M0 179 aa3.82□□□□□ -1.8
CTNNA1-212ENST00000518919 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.82□□□□□ -1.8
CTNNA1-212ENST00000518919 DEFB108BQ8NET1 73 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms