RNA–Protein interactions for RNA: ENST00000515533.1

CDC42SE2-212, Transcript of CDC42 small effector 2, humanhuman

TSL 4

Gene CDC42SE2, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-212ENST00000515533 RBFOX2O43251 390 aaKnown RBP eCLIP6.6□□□□□ -1.35
CDC42SE2-212ENST00000515533 TGOLN2O43493 480 aa6.6□□□□□ -1.35
CDC42SE2-212ENST00000515533 HPRT1P00492 218 aa6.6□□□□□ -1.35
CDC42SE2-212ENST00000515533 PPYP01298 95 aa6.6□□□□□ -1.35
CDC42SE2-212ENST00000515533 PTBP1P26599 531 aaKnown RBP eCLIP6.6□□□□□ -1.35
CDC42SE2-212ENST00000515533 EWSR1Q01844 656 aaKnown RBP eCLIP6.6□□□□□ -1.35
CDC42SE2-212ENST00000515533 ICAM4Q14773 271 aa6.6□□□□□ -1.35
CDC42SE2-212ENST00000515533 MSMO1Q15800 293 aa6.6□□□□□ -1.35
CDC42SE2-212ENST00000515533 BEST4Q8NFU0 473 aa6.6□□□□□ -1.35
CDC42SE2-212ENST00000515533 LGALS14Q8TCE9 139 aa6.6□□□□□ -1.35
CDC42SE2-212ENST00000515533 TMEM190Q8WZ59 177 aa6.6□□□□□ -1.35
CDC42SE2-212ENST00000515533 CNBD2Q96M20 576 aa6.6□□□□□ -1.35
CDC42SE2-212ENST00000515533 SRSF8Q9BRL6 282 aaKnown RBP6.6□□□□□ -1.35
CDC42SE2-212ENST00000515533 QTRT1Q9BXR0 403 aaKnown RBP6.6□□□□□ -1.35
CDC42SE2-212ENST00000515533 ZNF436Q9C0F3 470 aaPredicted RBP6.6□□□□□ -1.35
CDC42SE2-212ENST00000515533 SLC5A7Q9GZV3 580 aa6.6□□□□□ -1.35
CDC42SE2-212ENST00000515533 RHBDL2Q9NX52 303 aa6.6□□□□□ -1.35
CDC42SE2-212ENST00000515533 KIR2DL5BA0A0G2JN68 375 aa6.59□□□□□ -1.35
CDC42SE2-212ENST00000515533 KIR2DL5BA0A0G2JPC4 375 aa6.59□□□□□ -1.35
CDC42SE2-212ENST00000515533 OR2T8A6NH00 312 aa6.59□□□□□ -1.35
CDC42SE2-212ENST00000515533 PRSS29PA6NIE9 313 aa6.59□□□□□ -1.35
CDC42SE2-212ENST00000515533 ANKRD65E5RJM6 399 aa6.59□□□□□ -1.35
CDC42SE2-212ENST00000515533 UPK2O00526 184 aa6.59□□□□□ -1.35
CDC42SE2-212ENST00000515533 SSX5O60225 188 aa6.59□□□□□ -1.35
CDC42SE2-212ENST00000515533 RPA2P15927 270 aa6.59□□□□□ -1.35
CDC42SE2-212ENST00000515533 RPL35AP18077 110 aaKnown RBP6.59□□□□□ -1.35
CDC42SE2-212ENST00000515533 HSPA13P48723 471 aa6.59□□□□□ -1.35
CDC42SE2-212ENST00000515533 FXYD4P59646 89 aa6.59□□□□□ -1.35
CDC42SE2-212ENST00000515533 ERVK-16P61578 105 aa6.59□□□□□ -1.35
CDC42SE2-212ENST00000515533 POU2AF1Q16633 256 aa6.59□□□□□ -1.35
CDC42SE2-212ENST00000515533 THOC7Q6I9Y2 204 aaKnown RBP6.59□□□□□ -1.35
CDC42SE2-212ENST00000515533 SLC25A24Q6NUK1 477 aa6.59□□□□□ -1.35
CDC42SE2-212ENST00000515533 SFXN4Q6P4A7 337 aa6.59□□□□□ -1.35
CDC42SE2-212ENST00000515533 SPSB3Q6PJ21 355 aa6.59□□□□□ -1.35
CDC42SE2-212ENST00000515533 HSD17B13Q7Z5P4 300 aaPredicted RBP6.59□□□□□ -1.35
CDC42SE2-212ENST00000515533 TPRA1Q86W33 373 aa6.59□□□□□ -1.35
CDC42SE2-212ENST00000515533 KIR2DL5AQ8N109 375 aa6.59□□□□□ -1.35
CDC42SE2-212ENST00000515533 GDPD1Q8N9F7 314 aa6.59□□□□□ -1.35
CDC42SE2-212ENST00000515533 OR10W1Q8NGF6 305 aa6.59□□□□□ -1.35
CDC42SE2-212ENST00000515533 OR51H1Q8NH63 302 aa6.59□□□□□ -1.35
CDC42SE2-212ENST00000515533 KIR2DL5BQ8NHK3 375 aa6.59□□□□□ -1.35
CDC42SE2-212ENST00000515533 VN1R17PQ8TDU5 208 aa6.59□□□□□ -1.35
CDC42SE2-212ENST00000515533 RNF183Q96D59 192 aa6.59□□□□□ -1.35
CDC42SE2-212ENST00000515533 GALNT14Q96FL9 552 aa6.59□□□□□ -1.35
CDC42SE2-212ENST00000515533 BSCL2Q96G97 398 aaPredicted RBP6.59□□□□□ -1.35
CDC42SE2-212ENST00000515533 C20orf24Q9BUV8 137 aa6.59□□□□□ -1.35
CDC42SE2-212ENST00000515533 WDR12Q9GZL7 423 aaKnown RBP6.59□□□□□ -1.35
CDC42SE2-212ENST00000515533 C6orf62Q9GZU0 229 aaPredicted RBP6.59□□□□□ -1.35
CDC42SE2-212ENST00000515533 TMEM140Q9NV12 185 aa6.59□□□□□ -1.35
CDC42SE2-212ENST00000515533 TXNL4BQ9NX01 149 aaKnown RBP6.59□□□□□ -1.35
CDC42SE2-212ENST00000515533 RRP15Q9Y3B9 282 aaKnown RBP6.59□□□□□ -1.35
CDC42SE2-212ENST00000515533 TRAV3A0A0B4J244 114 aa6.58□□□□□ -1.36
CDC42SE2-212ENST00000515533 NDUFA4O00483 81 aa6.58□□□□□ -1.36
CDC42SE2-212ENST00000515533 S1PR2O95136 353 aa6.58□□□□□ -1.36
CDC42SE2-212ENST00000515533 SERPINE2P07093 398 aa6.58□□□□□ -1.36
CDC42SE2-212ENST00000515533 FGF2P09038 288 aa6.58□□□□□ -1.36
CDC42SE2-212ENST00000515533 TRAPPC2P0DI81 140 aa6.58□□□□□ -1.36
CDC42SE2-212ENST00000515533 TRAPPC2BP0DI82 140 aa6.58□□□□□ -1.36
CDC42SE2-212ENST00000515533 OR13C7P0DN81 318 aa6.58□□□□□ -1.36
CDC42SE2-212ENST00000515533 PSMB9P28065 219 aa6.58□□□□□ -1.36
CDC42SE2-212ENST00000515533 FGF9P31371 208 aaPredicted RBP6.58□□□□□ -1.36
CDC42SE2-212ENST00000515533 HERV-K104P61576 105 aa6.58□□□□□ -1.36
CDC42SE2-212ENST00000515533 ODF3L2Q3SX64 289 aa6.58□□□□□ -1.36
CDC42SE2-212ENST00000515533 AADACL3Q5VUY0 350 aa6.58□□□□□ -1.36
CDC42SE2-212ENST00000515533 IZUMO2Q6UXV1 221 aa6.58□□□□□ -1.36
CDC42SE2-212ENST00000515533 TMEM17Q86X19 198 aa6.58□□□□□ -1.36
CDC42SE2-212ENST00000515533 GVQW1Q8N7I0 195 aa6.58□□□□□ -1.36
CDC42SE2-212ENST00000515533 UBAC2Q8NBM4 344 aa6.58□□□□□ -1.36
CDC42SE2-212ENST00000515533 CD300LFQ8TDQ1 290 aa6.58□□□□□ -1.36
CDC42SE2-212ENST00000515533 BORCS5Q969J3 196 aa6.58□□□□□ -1.36
CDC42SE2-212ENST00000515533 HINT2Q9BX68 163 aa6.58□□□□□ -1.36
CDC42SE2-212ENST00000515533 PLEKHA2Q9HB19 425 aa6.58□□□□□ -1.36
CDC42SE2-212ENST00000515533 SSR3Q9UNL2 185 aa6.58□□□□□ -1.36
CDC42SE2-212ENST00000515533 HERC2O95714 4834 aa6.57□□□□□ -1.36
CDC42SE2-212ENST00000515533 TRAV18A0A075B6X5 111 aa6.57□□□□□ -1.36
CDC42SE2-212ENST00000515533 IGHV3OR16-8A0A075B7F1 116 aa6.57□□□□□ -1.36
CDC42SE2-212ENST00000515533 MARCH11A6NNE9 402 aa6.57□□□□□ -1.36
CDC42SE2-212ENST00000515533 FCER2P06734 321 aa6.57□□□□□ -1.36
CDC42SE2-212ENST00000515533 PTHLHP12272 177 aa6.57□□□□□ -1.36
CDC42SE2-212ENST00000515533 GABARAPL2P60520 117 aa6.57□□□□□ -1.36
CDC42SE2-212ENST00000515533 MXD1Q05195 221 aa6.57□□□□□ -1.36
CDC42SE2-212ENST00000515533 WT1-ASQ06250 92 aa6.57□□□□□ -1.36
CDC42SE2-212ENST00000515533 Q56UQ5 140 aa6.57□□□□□ -1.36
CDC42SE2-212ENST00000515533 ZNF818PQ6ZRF7 136 aa6.57□□□□□ -1.36
CDC42SE2-212ENST00000515533 HOGA1Q86XE5 327 aa6.57□□□□□ -1.36
CDC42SE2-212ENST00000515533 RPP25LQ8N5L8 163 aaKnown RBP6.57□□□□□ -1.36
CDC42SE2-212ENST00000515533 TSPAN14Q8NG11 270 aa6.57□□□□□ -1.36
CDC42SE2-212ENST00000515533 OR1L8Q8NGR8 309 aa6.57□□□□□ -1.36
CDC42SE2-212ENST00000515533 OR5B3Q8NH48 314 aa6.57□□□□□ -1.36
CDC42SE2-212ENST00000515533 PHLDA1Q8WV24 401 aaPredicted RBP6.57□□□□□ -1.36
CDC42SE2-212ENST00000515533 LSM10Q969L4 123 aaKnown RBP6.57□□□□□ -1.36
CDC42SE2-212ENST00000515533 ATP6V0BQ99437 205 aa6.57□□□□□ -1.36
CDC42SE2-212ENST00000515533 MAP6D1Q9H9H5 199 aa6.57□□□□□ -1.36
CDC42SE2-212ENST00000515533 C21orf62Q9NYP8 219 aa6.57□□□□□ -1.36
CDC42SE2-212ENST00000515533 COMMD9Q9P000 198 aa6.57□□□□□ -1.36
CDC42SE2-212ENST00000515533 ETV7Q9Y603 341 aa6.57□□□□□ -1.36
CDC42SE2-212ENST00000515533 F11RQ9Y624 299 aaKnown RBP6.57□□□□□ -1.36
CDC42SE2-212ENST00000515533 A0A0A6YYH2 397 aa6.56□□□□□ -1.36
CDC42SE2-212ENST00000515533 IGHV3-21A0A0B4J1V1 117 aa6.56□□□□□ -1.36
CDC42SE2-212ENST00000515533 TEX50A0A1B0GTY4 177 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms