RNA–Protein interactions for RNA: ENST00000513639.5

HTT-212, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 259 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-212ENST00000513639 FAM25GB3EWG6 89 aa5.49□□□□□ -1.53
HTT-212ENST00000513639 K7EMT4 169 aa5.49□□□□□ -1.53
HTT-212ENST00000513639 NDUFA4O00483 81 aa5.49□□□□□ -1.53
HTT-212ENST00000513639 TGOLN2O43493 480 aa5.49□□□□□ -1.53
HTT-212ENST00000513639 EIF4EP06730 217 aaKnown RBP5.49□□□□□ -1.53
HTT-212ENST00000513639 CD7P09564 240 aa5.49□□□□□ -1.53
HTT-212ENST00000513639 ZNF182P17025 639 aaPredicted RBP5.49□□□□□ -1.53
HTT-212ENST00000513639 ELK1P19419 428 aa5.49□□□□□ -1.53
HTT-212ENST00000513639 TBPP20226 339 aa5.49□□□□□ -1.53
HTT-212ENST00000513639 GPR183P32249 361 aa5.49□□□□□ -1.53
HTT-212ENST00000513639 HSPE1P61604 102 aaKnown RBP5.49□□□□□ -1.53
HTT-212ENST00000513639 VBP1P61758 197 aa5.49□□□□□ -1.53
HTT-212ENST00000513639 NCS1P62166 190 aa5.49□□□□□ -1.53
HTT-212ENST00000513639 ERHP84090 104 aaKnown RBP5.49□□□□□ -1.53
HTT-212ENST00000513639 PHLDA2Q53GA4 152 aa5.49□□□□□ -1.53
HTT-212ENST00000513639 C19orf35Q6ZS72 473 aa5.49□□□□□ -1.53
HTT-212ENST00000513639 TBC1D26Q86UD7 250 aa5.49□□□□□ -1.53
HTT-212ENST00000513639 SNX29P2Q8IUI4 249 aa5.49□□□□□ -1.53
HTT-212ENST00000513639 OR2C3Q8N628 320 aa5.49□□□□□ -1.53
HTT-212ENST00000513639 ZFAND1Q8TCF1 268 aa5.49□□□□□ -1.53
HTT-212ENST00000513639 SCARB1Q8WTV0 552 aa5.49□□□□□ -1.53
HTT-212ENST00000513639 WDR89Q96FK6 387 aaPredicted RBP5.49□□□□□ -1.53
HTT-212ENST00000513639 ZNF486Q96H40 463 aaPredicted RBP5.49□□□□□ -1.53
HTT-212ENST00000513639 HIPK2Q9H2X6 1198 aa5.49□□□□□ -1.53
HTT-212ENST00000513639 SRD5A3Q9H8P0 318 aa5.49□□□□□ -1.53
HTT-212ENST00000513639 PLEKHA3Q9HB20 300 aa5.49□□□□□ -1.53
HTT-212ENST00000513639 DAZ1Q9NQZ3 744 aaKnown RBP5.49□□□□□ -1.53
HTT-212ENST00000513639 TMEM14BQ9NUH8 114 aa5.49□□□□□ -1.53
HTT-212ENST00000513639 MLXQ9UH92 298 aa5.49□□□□□ -1.53
HTT-212ENST00000513639 S4R3C0 116 aa5.49□□□□□ -1.53
HTT-212ENST00000513639 DYNC2H1Q8NCM8 4307 aaKnown RBP5.48□□□□□ -1.53
HTT-212ENST00000513639 LOC102724200A0A096LPH7 203 aaPredicted RBP5.48□□□□□ -1.53
HTT-212ENST00000513639 RBMY1BA6NDE4 496 aaKnown RBP5.48□□□□□ -1.53
HTT-212ENST00000513639 RBMY1EA6NEQ0 496 aaKnown RBP5.48□□□□□ -1.53
HTT-212ENST00000513639 C15orf62A8K5M9 175 aa5.48□□□□□ -1.53
HTT-212ENST00000513639 NUPL2O15504 423 aaKnown RBP5.48□□□□□ -1.53
HTT-212ENST00000513639 HPGDSO60760 199 aa5.48□□□□□ -1.53
HTT-212ENST00000513639 B3GALNT1O75752 331 aa5.48□□□□□ -1.53
HTT-212ENST00000513639 SCAF4O95104 1147 aaKnown RBP5.48□□□□□ -1.53
HTT-212ENST00000513639 CD5P06127 495 aa5.48□□□□□ -1.53
HTT-212ENST00000513639 RBMY1DP0C7P1 496 aaKnown RBP5.48□□□□□ -1.53
HTT-212ENST00000513639 SNCAP37840 140 aa5.48□□□□□ -1.53
HTT-212ENST00000513639 SUB1P53999 127 aaKnown RBP eCLIP5.48□□□□□ -1.53
HTT-212ENST00000513639 MFAP4P55083 255 aa5.48□□□□□ -1.53
HTT-212ENST00000513639 RELQ04864 619 aaPredicted RBP5.48□□□□□ -1.53
HTT-212ENST00000513639 Q56UQ5 140 aa5.48□□□□□ -1.53
HTT-212ENST00000513639 RNASE10Q5GAN6 216 aaKnown RBP5.48□□□□□ -1.53
HTT-212ENST00000513639 TMEM61Q8N0U2 210 aa5.48□□□□□ -1.53
HTT-212ENST00000513639 ARRDC1Q8N5I2 433 aa5.48□□□□□ -1.53
HTT-212ENST00000513639 TERB2Q8NHR7 220 aa5.48□□□□□ -1.53
HTT-212ENST00000513639 SEC22AQ96IW7 307 aa5.48□□□□□ -1.53
HTT-212ENST00000513639 SPAG8Q99932 426 aaPredicted RBP5.48□□□□□ -1.53
HTT-212ENST00000513639 RABL2AQ9UBK7 228 aaPredicted RBP5.48□□□□□ -1.53
HTT-212ENST00000513639 RABL2BQ9UNT1 228 aa5.48□□□□□ -1.53
HTT-212ENST00000513639 NSG2Q9Y328 171 aa5.48□□□□□ -1.53
HTT-212ENST00000513639 TRAV14DV4A0A0A6YYC5 116 aa5.47□□□□□ -1.53
HTT-212ENST00000513639 IGHV3-35A0A0C4DH35 117 aa5.47□□□□□ -1.53
HTT-212ENST00000513639 OR4C46A6NHA9 309 aa5.47□□□□□ -1.53
HTT-212ENST00000513639 C15orf61A6NNL5 157 aa5.47□□□□□ -1.53
HTT-212ENST00000513639 UBE2CO00762 179 aa5.47□□□□□ -1.53
HTT-212ENST00000513639 TSPAN4O14817 238 aa5.47□□□□□ -1.53
HTT-212ENST00000513639 YIF1AO95070 293 aa5.47□□□□□ -1.53
HTT-212ENST00000513639 CTSGP08311 255 aa5.47□□□□□ -1.53
HTT-212ENST00000513639 PGAM2P15259 253 aa5.47□□□□□ -1.53
HTT-212ENST00000513639 FCGR2BP31994 310 aaPredicted RBP5.47□□□□□ -1.53
HTT-212ENST00000513639 BMI1P35226 326 aa5.47□□□□□ -1.53
HTT-212ENST00000513639 NPBWR1P48145 328 aa5.47□□□□□ -1.53
HTT-212ENST00000513639 APOC4P55056 127 aa5.47□□□□□ -1.53
HTT-212ENST00000513639 RND3P61587 244 aa5.47□□□□□ -1.53
HTT-212ENST00000513639 PAFAH1B2P68402 229 aa5.47□□□□□ -1.53
HTT-212ENST00000513639 PRCDQ00LT1 54 aa5.47□□□□□ -1.53
HTT-212ENST00000513639 SSBP1Q04837 148 aaKnown RBP5.47□□□□□ -1.53
HTT-212ENST00000513639 ZFAND6Q6FIF0 208 aa5.47□□□□□ -1.53
HTT-212ENST00000513639 BTNL8Q6UX41 500 aa5.47□□□□□ -1.53
HTT-212ENST00000513639 UNQ9165/PRO28630Q6UXU0 137 aa5.47□□□□□ -1.53
HTT-212ENST00000513639 UBAC2Q8NBM4 344 aa5.47□□□□□ -1.53
HTT-212ENST00000513639 CACNG8Q8WXS5 425 aa5.47□□□□□ -1.53
HTT-212ENST00000513639 TMEM190Q8WZ59 177 aa5.47□□□□□ -1.53
HTT-212ENST00000513639 FAM110AQ9BQ89 295 aa5.47□□□□□ -1.53
HTT-212ENST00000513639 C20orf24Q9BUV8 137 aa5.47□□□□□ -1.53
HTT-212ENST00000513639 GGTLC1Q9BX51 225 aa5.47□□□□□ -1.53
HTT-212ENST00000513639 C6orf62Q9GZU0 229 aaPredicted RBP5.47□□□□□ -1.53
HTT-212ENST00000513639 COPZ2Q9P299 210 aa5.47□□□□□ -1.53
HTT-212ENST00000513639 KLK11Q9UBX7 282 aa5.47□□□□□ -1.53
HTT-212ENST00000513639 MTFP1Q9UDX5 166 aa5.47□□□□□ -1.53
HTT-212ENST00000513639 CACFD1Q9UGQ2 172 aa5.47□□□□□ -1.53
HTT-212ENST00000513639 C3orf85A0A1B0GTC6 90 aa5.46□□□□□ -1.54
HTT-212ENST00000513639 K7EIM0 57 aa5.46□□□□□ -1.54
HTT-212ENST00000513639 M0QYG6 137 aa5.46□□□□□ -1.54
HTT-212ENST00000513639 SCGB2A1O75556 95 aa5.46□□□□□ -1.54
HTT-212ENST00000513639 IFNA17P01571 189 aa5.46□□□□□ -1.54
HTT-212ENST00000513639 CD3DP04234 171 aa5.46□□□□□ -1.54
HTT-212ENST00000513639 MFAP2P55001 183 aa5.46□□□□□ -1.54
HTT-212ENST00000513639 PIGPP57054 158 aa5.46□□□□□ -1.54
HTT-212ENST00000513639 TAS2R19P59542 299 aa5.46□□□□□ -1.54
HTT-212ENST00000513639 MRPS10P82664 201 aaKnown RBP5.46□□□□□ -1.54
HTT-212ENST00000513639 MEF2DQ14814 521 aa5.46□□□□□ -1.54
HTT-212ENST00000513639 CTF1Q16619 201 aa5.46□□□□□ -1.54
HTT-212ENST00000513639 GPR107Q5VW38 600 aa5.46□□□□□ -1.54
HTT-212ENST00000513639 Q6ZWC4 215 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms