RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 TEX22C9J3V5 150 aa12.12□□□□□ -0.47
SCLT1-209ENST00000511426 E7EUB6 86 aa12.12□□□□□ -0.47
SCLT1-209ENST00000511426 TGFAP01135 160 aa12.12□□□□□ -0.47
SCLT1-209ENST00000511426 PRH1P02810 166 aa12.12□□□□□ -0.47
SCLT1-209ENST00000511426 FGF7P21781 194 aa12.12□□□□□ -0.47
SCLT1-209ENST00000511426 CD69Q07108 199 aa12.12□□□□□ -0.47
SCLT1-209ENST00000511426 COMMD7Q86VX2 200 aa12.12□□□□□ -0.47
SCLT1-209ENST00000511426 P2RX4Q99571 388 aa12.12□□□□□ -0.47
SCLT1-209ENST00000511426 NPCDR1Q9BY65 106 aa12.12□□□□□ -0.47
SCLT1-209ENST00000511426 A0A1B0GW64 132 aa12.11□□□□□ -0.47
SCLT1-209ENST00000511426 RAB19A4D1S5 217 aa12.11□□□□□ -0.47
SCLT1-209ENST00000511426 BTBD17A6NE02 478 aa12.11□□□□□ -0.47
SCLT1-209ENST00000511426 TEX46H3BTG2 121 aa12.11□□□□□ -0.47
SCLT1-209ENST00000511426 CNIH1O95406 144 aa12.11□□□□□ -0.47
SCLT1-209ENST00000511426 CAMLGP49069 296 aa12.11□□□□□ -0.47
SCLT1-209ENST00000511426 SSBP2P81877 361 aaPredicted RBP12.11□□□□□ -0.47
SCLT1-209ENST00000511426 RUNX1Q01196 453 aa12.11□□□□□ -0.47
SCLT1-209ENST00000511426 HNF4GQ14541 408 aa12.11□□□□□ -0.47
SCLT1-209ENST00000511426 PXDC1Q5TGL8 231 aa12.11□□□□□ -0.47
SCLT1-209ENST00000511426 CYB5R2Q6BCY4 276 aa12.11□□□□□ -0.47
SCLT1-209ENST00000511426 TEPPQ6URK8 271 aa12.11□□□□□ -0.47
SCLT1-209ENST00000511426 BTNL8Q6UX41 500 aa12.11□□□□□ -0.47
SCLT1-209ENST00000511426 TREML4Q6UXN2 200 aa12.11□□□□□ -0.47
SCLT1-209ENST00000511426 TMEM182Q6ZP80 229 aaPredicted RBP12.11□□□□□ -0.47
SCLT1-209ENST00000511426 Q6ZRG5 221 aa12.11□□□□□ -0.47
SCLT1-209ENST00000511426 TMEM144Q7Z5S9 345 aa12.11□□□□□ -0.47
SCLT1-209ENST00000511426 LFNGQ8NES3 379 aa12.11□□□□□ -0.47
SCLT1-209ENST00000511426 RBMXL1Q96E39 390 aaKnown RBP12.11□□□□□ -0.47
SCLT1-209ENST00000511426 CXorf58Q96LI9 332 aa12.11□□□□□ -0.47
SCLT1-209ENST00000511426 PITPNC1Q9UKF7 332 aa12.11□□□□□ -0.47
SCLT1-209ENST00000511426 LSM4Q9Y4Z0 139 aaKnown RBP12.11□□□□□ -0.47
SCLT1-209ENST00000511426 NCBP2LA6PVI3 153 aaKnown RBP12.1□□□□□ -0.47
SCLT1-209ENST00000511426 M0QZK8 103 aa12.1□□□□□ -0.47
SCLT1-209ENST00000511426 CYB5BO43169 146 aa12.1□□□□□ -0.47
SCLT1-209ENST00000511426 IGHV4-38-2P0DP08 117 aa12.1□□□□□ -0.47
SCLT1-209ENST00000511426 GNB1P62873 340 aa12.1□□□□□ -0.47
SCLT1-209ENST00000511426 FXYD3Q14802 87 aa12.1□□□□□ -0.47
SCLT1-209ENST00000511426 UQCC3Q6UW78 93 aa12.1□□□□□ -0.47
SCLT1-209ENST00000511426 C9orf139Q6ZV77 190 aa12.1□□□□□ -0.47
SCLT1-209ENST00000511426 C16orf82Q7Z2V1 217 aa12.1□□□□□ -0.47
SCLT1-209ENST00000511426 Q8N9W7 124 aa12.1□□□□□ -0.47
SCLT1-209ENST00000511426 TMEM68Q96MH6 324 aa12.1□□□□□ -0.47
SCLT1-209ENST00000511426 RASL11BQ9BPW5 248 aa12.1□□□□□ -0.47
SCLT1-209ENST00000511426 RSG1Q9BU20 258 aa12.1□□□□□ -0.47
SCLT1-209ENST00000511426 F11RQ9Y624 299 aaKnown RBP12.1□□□□□ -0.47
SCLT1-209ENST00000511426 FBN2P35556 2912 aa12.1□□□□□ -0.47
SCLT1-209ENST00000511426 TET2Q6N021 2002 aaPredicted RBP12.1□□□□□ -0.47
SCLT1-209ENST00000511426 OPRK1P41145 380 aa12.1□□□□□ -0.47
SCLT1-209ENST00000511426 RAB2AP61019 212 aa12.1□□□□□ -0.47
SCLT1-209ENST00000511426 ARSJQ5FYB0 599 aaPredicted RBP12.1□□□□□ -0.47
SCLT1-209ENST00000511426 KLF17Q5JT82 389 aaPredicted RBP12.1□□□□□ -0.47
SCLT1-209ENST00000511426 RUSC1-AS1Q66K80 236 aa12.1□□□□□ -0.47
SCLT1-209ENST00000511426 ARPC1AQ92747 370 aa12.1□□□□□ -0.47
SCLT1-209ENST00000511426 MARC2Q969Z3 335 aa12.1□□□□□ -0.47
SCLT1-209ENST00000511426 SLC35E1Q96K37 410 aa12.1□□□□□ -0.47
SCLT1-209ENST00000511426 RBM14Q96PK6 669 aaKnown RBP12.1□□□□□ -0.47
SCLT1-209ENST00000511426 MOB4Q9Y3A3 225 aa12.1□□□□□ -0.47
SCLT1-209ENST00000511426 A0A0U1RQK1 487 aa12.09□□□□□ -0.47
SCLT1-209ENST00000511426 MFSD2BA6NFX1 497 aa12.09□□□□□ -0.47
SCLT1-209ENST00000511426 NPIPB5A8MRT5 1133 aa12.09□□□□□ -0.47
SCLT1-209ENST00000511426 FCN1O00602 326 aa12.09□□□□□ -0.47
SCLT1-209ENST00000511426 HBE1P02100 147 aa12.09□□□□□ -0.47
SCLT1-209ENST00000511426 CRYGCP07315 174 aa12.09□□□□□ -0.47
SCLT1-209ENST00000511426 CD24P25063 80 aa12.09□□□□□ -0.47
SCLT1-209ENST00000511426 CX3CL1P78423 397 aa12.09□□□□□ -0.47
SCLT1-209ENST00000511426 AKR1C1Q04828 323 aa12.09□□□□□ -0.47
SCLT1-209ENST00000511426 TMEM41BQ5BJD5 291 aa12.09□□□□□ -0.47
SCLT1-209ENST00000511426 BRD3OSQ6XYD6 125 aa12.09□□□□□ -0.47
SCLT1-209ENST00000511426 SLC16A13Q7RTY0 426 aa12.09□□□□□ -0.47
SCLT1-209ENST00000511426 NANPQ8TBE9 248 aa12.09□□□□□ -0.47
SCLT1-209ENST00000511426 PCNPQ8WW12 178 aaKnown RBP12.09□□□□□ -0.47
SCLT1-209ENST00000511426 C22orf15Q8WYQ4 148 aa12.09□□□□□ -0.47
SCLT1-209ENST00000511426 PLA2G2EQ9NZK7 142 aa12.09□□□□□ -0.47
SCLT1-209ENST00000511426 SPG11Q96JI7 2443 aa12.09□□□□□ -0.47
SCLT1-209ENST00000511426 ABCA2Q9BZC7 2435 aa12.08□□□□□ -0.48
SCLT1-209ENST00000511426 TRAV1-1A0A0B4J248 108 aa12.08□□□□□ -0.48
SCLT1-209ENST00000511426 SMCO3A2RU48 225 aa12.08□□□□□ -0.48
SCLT1-209ENST00000511426 FSHBP01225 129 aa12.08□□□□□ -0.48
SCLT1-209ENST00000511426 CTRB1P17538 263 aa12.08□□□□□ -0.48
SCLT1-209ENST00000511426 CTRB2Q6GPI1 263 aa12.08□□□□□ -0.48
SCLT1-209ENST00000511426 FAM213BQ8TBF2 198 aa12.08□□□□□ -0.48
SCLT1-209ENST00000511426 SSMEM1Q8WWF3 244 aa12.08□□□□□ -0.48
SCLT1-209ENST00000511426 RPL29P47914 159 aaKnown RBP12.07□□□□□ -0.48
SCLT1-209ENST00000511426 ZNF616Q08AN1 781 aa12.07□□□□□ -0.48
SCLT1-209ENST00000511426 ACOT6Q3I5F7 207 aaPredicted RBP12.07□□□□□ -0.48
SCLT1-209ENST00000511426 ABHD5Q8WTS1 349 aa12.07□□□□□ -0.48
SCLT1-209ENST00000511426 TSPAN15O95858 294 aa12.06□□□□□ -0.48
SCLT1-209ENST00000511426 AVPP01185 164 aa12.06□□□□□ -0.48
SCLT1-209ENST00000511426 H2AFB1P0C5Y9 115 aa12.06□□□□□ -0.48
SCLT1-209ENST00000511426 AREGP15514 252 aa12.06□□□□□ -0.48
SCLT1-209ENST00000511426 M6PRP20645 277 aa12.06□□□□□ -0.48
SCLT1-209ENST00000511426 PAX6P26367 422 aa12.06□□□□□ -0.48
SCLT1-209ENST00000511426 FAM120AOSQ5T036 256 aa12.06□□□□□ -0.48
SCLT1-209ENST00000511426 HIST2H2BCQ6DN03 193 aa12.06□□□□□ -0.48
SCLT1-209ENST00000511426 C5orf56Q8N8D9 126 aa12.06□□□□□ -0.48
SCLT1-209ENST00000511426 PIFOQ8TCI5 191 aa12.06□□□□□ -0.48
SCLT1-209ENST00000511426 CITED4Q96RK1 184 aa12.06□□□□□ -0.48
SCLT1-209ENST00000511426 SSX3Q99909 188 aa12.06□□□□□ -0.48
SCLT1-209ENST00000511426 SLC25A33Q9BSK2 321 aa12.06□□□□□ -0.48
SCLT1-209ENST00000511426 GGTLC1Q9BX51 225 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms