RNA–Protein interactions for RNA: ENST00000511009.1

MBD4-209, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 2

Gene MBD4, Length 530 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-209ENST00000511009 KIF20BQ96Q89 1820 aa2.32□□□□□ -2.04
MBD4-209ENST00000511009 PKD1L3Q7Z443 1732 aa2.31□□□□□ -2.04
MBD4-209ENST00000511009 TOGARAM1Q9Y4F4 1720 aa2.31□□□□□ -2.04
MBD4-209ENST00000511009 ZSWIM8A7E2V4 1837 aa2.31□□□□□ -2.04
MBD4-209ENST00000511009 ITGB4P16144 1822 aa2.31□□□□□ -2.04
MBD4-209ENST00000511009 TAF1LQ8IZX4 1826 aa2.31□□□□□ -2.04
MBD4-209ENST00000511009 LCTP09848 1927 aa2.31□□□□□ -2.04
MBD4-209ENST00000511009 A0A087WUU8 490 aa2.31□□□□□ -2.04
MBD4-209ENST00000511009 A0A1W2PQL4 384 aaPredicted RBP2.31□□□□□ -2.04
MBD4-209ENST00000511009 ATP5HO75947 161 aa2.31□□□□□ -2.04
MBD4-209ENST00000511009 KCNE1P15382 129 aa2.31□□□□□ -2.04
MBD4-209ENST00000511009 IDH3GP51553 393 aaPredicted RBP2.31□□□□□ -2.04
MBD4-209ENST00000511009 RBM11P57052 281 aaKnown RBP2.31□□□□□ -2.04
MBD4-209ENST00000511009 FXYD7P58549 80 aa2.31□□□□□ -2.04
MBD4-209ENST00000511009 FKBP1AP62942 108 aaKnown RBP2.31□□□□□ -2.04
MBD4-209ENST00000511009 TNFRSF9Q07011 255 aa2.31□□□□□ -2.04
MBD4-209ENST00000511009 SPA17Q15506 151 aa2.31□□□□□ -2.04
MBD4-209ENST00000511009 LGALS9BQ3B8N2 356 aa2.31□□□□□ -2.04
MBD4-209ENST00000511009 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.31□□□□□ -2.04
MBD4-209ENST00000511009 LGALS9CQ6DKI2 356 aa2.31□□□□□ -2.04
MBD4-209ENST00000511009 TBC1D19Q8N5T2 526 aa2.31□□□□□ -2.04
MBD4-209ENST00000511009 ANKRD7Q92527 254 aa2.31□□□□□ -2.04
MBD4-209ENST00000511009 RNASE6Q93091 150 aaKnown RBP2.31□□□□□ -2.04
MBD4-209ENST00000511009 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.31□□□□□ -2.04
MBD4-209ENST00000511009 TAAR3PQ9P1P4 343 aa2.31□□□□□ -2.04
MBD4-209ENST00000511009 PRELID1Q9Y255 219 aa2.31□□□□□ -2.04
MBD4-209ENST00000511009 UTRNP46939 3433 aa2.31□□□□□ -2.04
MBD4-209ENST00000511009 COL24A1Q17RW2 1714 aa2.31□□□□□ -2.04
MBD4-209ENST00000511009 ANKRD26Q9UPS8 1709 aa2.31□□□□□ -2.04
MBD4-209ENST00000511009 CLDN24A6NM45 220 aa2.3□□□□□ -2.04
MBD4-209ENST00000511009 PSMD12O00232 456 aaPredicted RBP2.3□□□□□ -2.04
MBD4-209ENST00000511009 TCRBP04435 133 aa2.3□□□□□ -2.04
MBD4-209ENST00000511009 LGALS3P17931 250 aaKnown RBP2.3□□□□□ -2.04
MBD4-209ENST00000511009 ALOX5APP20292 161 aa2.3□□□□□ -2.04
MBD4-209ENST00000511009 BLVRBP30043 206 aaPredicted RBP2.3□□□□□ -2.04
MBD4-209ENST00000511009 XCL1P47992 114 aa2.3□□□□□ -2.04
MBD4-209ENST00000511009 KRTAP10-1P60331 282 aa2.3□□□□□ -2.04
MBD4-209ENST00000511009 LSM6P62312 80 aaKnown RBP2.3□□□□□ -2.04
MBD4-209ENST00000511009 RPL30P62888 115 aaKnown RBP2.3□□□□□ -2.04
MBD4-209ENST00000511009 REEP5Q00765 189 aa2.3□□□□□ -2.04
MBD4-209ENST00000511009 CLDN22Q8N7P3 220 aa2.3□□□□□ -2.04
MBD4-209ENST00000511009 OR1L8Q8NGR8 309 aa2.3□□□□□ -2.04
MBD4-209ENST00000511009 OR4X1Q8NH49 305 aa2.3□□□□□ -2.04
MBD4-209ENST00000511009 SGMS2Q8NHU3 365 aa2.3□□□□□ -2.04
MBD4-209ENST00000511009 ROPN1LQ96C74 230 aa2.3□□□□□ -2.04
MBD4-209ENST00000511009 DCUN1D1Q96GG9 259 aa2.3□□□□□ -2.04
MBD4-209ENST00000511009 CNBD2Q96M20 576 aa2.3□□□□□ -2.04
MBD4-209ENST00000511009 OR52E6Q96RD3 313 aa2.3□□□□□ -2.04
MBD4-209ENST00000511009 SLC22A13Q9Y226 551 aa2.3□□□□□ -2.04
MBD4-209ENST00000511009 TIAM2Q8IVF5 1701 aa2.3□□□□□ -2.04
MBD4-209ENST00000511009 ARFGEF1Q9Y6D6 1849 aa2.3□□□□□ -2.04
MBD4-209ENST00000511009 CACNA1SQ13698 1873 aa2.3□□□□□ -2.04
MBD4-209ENST00000511009 PDE4DIPQ5VU43 2346 aa2.3□□□□□ -2.04
MBD4-209ENST00000511009 CHD5Q8TDI0 1954 aa2.29□□□□□ -2.04
MBD4-209ENST00000511009 NAV1Q8NEY1 1877 aa2.29□□□□□ -2.04
MBD4-209ENST00000511009 MAP2P11137 1827 aaKnown RBP2.29□□□□□ -2.04
MBD4-209ENST00000511009 KIF13BQ9NQT8 1826 aa2.29□□□□□ -2.04
MBD4-209ENST00000511009 MRC1P22897 1456 aa2.29□□□□□ -2.04
MBD4-209ENST00000511009 ABCC12Q96J65 1359 aa2.29□□□□□ -2.04
MBD4-209ENST00000511009 IGHV3-15A0A0B4J1V0 119 aa2.29□□□□□ -2.04
MBD4-209ENST00000511009 MDFIC2A0A1B0GVS7 189 aa2.29□□□□□ -2.04
MBD4-209ENST00000511009 TMEM269A0A1B0GVZ9 245 aa2.29□□□□□ -2.04
MBD4-209ENST00000511009 A0A1W2PQD3 144 aa2.29□□□□□ -2.04
MBD4-209ENST00000511009 C11orf86A6NJI1 115 aa2.29□□□□□ -2.04
MBD4-209ENST00000511009 KPNA3O00505 521 aaPredicted RBP2.29□□□□□ -2.04
MBD4-209ENST00000511009 NPYP01303 97 aa2.29□□□□□ -2.04
MBD4-209ENST00000511009 GABRA4P48169 554 aa2.29□□□□□ -2.04
MBD4-209ENST00000511009 RAB13P51153 203 aa2.29□□□□□ -2.04
MBD4-209ENST00000511009 PSME3P61289 254 aa2.29□□□□□ -2.04
MBD4-209ENST00000511009 AP1S1P61966 158 aa2.29□□□□□ -2.04
MBD4-209ENST00000511009 POLR2GP62487 172 aaKnown RBP eCLIP2.29□□□□□ -2.04
MBD4-209ENST00000511009 TNFAIP6P98066 277 aaPredicted RBP2.29□□□□□ -2.04
MBD4-209ENST00000511009 IFITM2Q01629 132 aa2.29□□□□□ -2.04
MBD4-209ENST00000511009 SRSF6Q13247 344 aaKnown RBP2.29□□□□□ -2.04
MBD4-209ENST00000511009 TNFAIP8L3Q5GJ75 292 aa2.29□□□□□ -2.04
MBD4-209ENST00000511009 TMEM86BQ8N661 226 aa2.29□□□□□ -2.04
MBD4-209ENST00000511009 CLDND2Q8NHS1 167 aa2.29□□□□□ -2.04
MBD4-209ENST00000511009 GOLGB1Q14789 3259 aaKnown RBP2.29□□□□□ -2.04
MBD4-209ENST00000511009 PLXNB1O43157 2135 aa2.29□□□□□ -2.04
MBD4-209ENST00000511009 NLRC5Q86WI3 1866 aa2.28□□□□□ -2.04
MBD4-209ENST00000511009 COL5A3P25940 1745 aaPredicted RBP2.28□□□□□ -2.04
MBD4-209ENST00000511009 IBTKQ9P2D0 1353 aaPredicted RBP2.28□□□□□ -2.04
MBD4-209ENST00000511009 ODF3BA8MYP8 253 aa2.28□□□□□ -2.04
MBD4-209ENST00000511009 INMT-MINDY4F8WBC2 141 aa2.28□□□□□ -2.04
MBD4-209ENST00000511009 LST1O00453 97 aa2.28□□□□□ -2.04
MBD4-209ENST00000511009 PLA2G10O15496 165 aa2.28□□□□□ -2.04
MBD4-209ENST00000511009 GNRH2O43555 120 aa2.28□□□□□ -2.04
MBD4-209ENST00000511009 CHP2O43745 196 aa2.28□□□□□ -2.04
MBD4-209ENST00000511009 UCHL1P09936 223 aa2.28□□□□□ -2.04
MBD4-209ENST00000511009 ZNF705DP0CH99 300 aaPredicted RBP2.28□□□□□ -2.04
MBD4-209ENST00000511009 FGF6P10767 208 aa2.28□□□□□ -2.04
MBD4-209ENST00000511009 HAAOP46952 286 aa2.28□□□□□ -2.04
MBD4-209ENST00000511009 MRPS25P82663 173 aaKnown RBP2.28□□□□□ -2.04
MBD4-209ENST00000511009 AKR1C1Q04828 323 aa2.28□□□□□ -2.04
MBD4-209ENST00000511009 AKIRIN2Q53H80 203 aa2.28□□□□□ -2.04
MBD4-209ENST00000511009 GLT8D1Q68CQ7 371 aa2.28□□□□□ -2.04
MBD4-209ENST00000511009 PP632Q6XCG6 107 aa2.28□□□□□ -2.04
MBD4-209ENST00000511009 C1orf158Q8N1D5 194 aa2.28□□□□□ -2.04
MBD4-209ENST00000511009 SLC35F6Q8N357 371 aa2.28□□□□□ -2.04
MBD4-209ENST00000511009 OR2T4Q8NH00 348 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms