RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 MRPS16Q9Y3D3 137 aaKnown RBP7.38□□□□□ -1.23
SNF8-207ENST00000509995 SNTNA6NMZ2 147 aa7.37□□□□□ -1.23
SNF8-207ENST00000509995 DEFB130BP0DP73 79 aa7.37□□□□□ -1.23
SNF8-207ENST00000509995 DEFB130AP0DP74 79 aa7.37□□□□□ -1.23
SNF8-207ENST00000509995 HLA-DRB4P13762 266 aa7.37□□□□□ -1.23
SNF8-207ENST00000509995 FXYD7P58549 80 aa7.37□□□□□ -1.23
SNF8-207ENST00000509995 RCN1Q15293 331 aa7.37□□□□□ -1.23
SNF8-207ENST00000509995 RRN3P1Q2M238 152 aa7.37□□□□□ -1.23
SNF8-207ENST00000509995 YIF1BQ5BJH7 314 aa7.37□□□□□ -1.23
SNF8-207ENST00000509995 THOC7Q6I9Y2 204 aaKnown RBP7.37□□□□□ -1.23
SNF8-207ENST00000509995 HSD17B13Q7Z5P4 300 aaPredicted RBP7.37□□□□□ -1.23
SNF8-207ENST00000509995 H1FOOQ8IZA3 346 aaPredicted RBP7.37□□□□□ -1.23
SNF8-207ENST00000509995 TCTEX1D2Q8WW35 142 aa7.37□□□□□ -1.23
SNF8-207ENST00000509995 ZFAND3Q9H8U3 227 aa7.37□□□□□ -1.23
SNF8-207ENST00000509995 RBMX2Q9Y388 322 aaKnown RBP7.37□□□□□ -1.23
SNF8-207ENST00000509995 HLA-DRB4X5D2U9 266 aa7.37□□□□□ -1.23
SNF8-207ENST00000509995 IGLV5-52A0A0A0MRZ9 124 aa7.36□□□□□ -1.23
SNF8-207ENST00000509995 TRAV3A0A0B4J244 114 aa7.36□□□□□ -1.23
SNF8-207ENST00000509995 LYRM9A8MSI8 78 aa7.36□□□□□ -1.23
SNF8-207ENST00000509995 FOXI3A8MTJ6 420 aaPredicted RBP7.36□□□□□ -1.23
SNF8-207ENST00000509995 TMEM14DPA8MWL7 114 aa7.36□□□□□ -1.23
SNF8-207ENST00000509995 OGG1O15527 345 aa7.36□□□□□ -1.23
SNF8-207ENST00000509995 ATP5G1P05496 136 aa7.36□□□□□ -1.23
SNF8-207ENST00000509995 LIMS3P0CW19 117 aa7.36□□□□□ -1.23
SNF8-207ENST00000509995 LIMS4P0CW20 117 aa7.36□□□□□ -1.23
SNF8-207ENST00000509995 P2RY1P47900 373 aa7.36□□□□□ -1.23
SNF8-207ENST00000509995 ATP5G3P48201 142 aa7.36□□□□□ -1.23
SNF8-207ENST00000509995 QRFPP83859 136 aa7.36□□□□□ -1.23
SNF8-207ENST00000509995 ESRGQ1W209 222 aa7.36□□□□□ -1.23
SNF8-207ENST00000509995 KCTD21Q4G0X4 260 aa7.36□□□□□ -1.23
SNF8-207ENST00000509995 TTC23Q5W5X9 447 aa7.36□□□□□ -1.23
SNF8-207ENST00000509995 ZNF709Q8N972 641 aa7.36□□□□□ -1.23
SNF8-207ENST00000509995 ARHGAP5-AS1Q96IT6 56 aa7.36□□□□□ -1.23
SNF8-207ENST00000509995 Q96MT0 163 aa7.36□□□□□ -1.23
SNF8-207ENST00000509995 HSD17B10Q99714 261 aaKnown RBP7.36□□□□□ -1.23
SNF8-207ENST00000509995 LPAR5Q9H1C0 372 aa7.36□□□□□ -1.23
SNF8-207ENST00000509995 GOLT1BQ9Y3E0 138 aa7.36□□□□□ -1.23
SNF8-207ENST00000509995 A0A1W2PS18 150 aa7.35□□□□□ -1.23
SNF8-207ENST00000509995 IGLV2-14P01704 120 aa7.35□□□□□ -1.23
SNF8-207ENST00000509995 CDK1P06493 297 aa7.35□□□□□ -1.23
SNF8-207ENST00000509995 FCGR3AP08637 254 aa7.35□□□□□ -1.23
SNF8-207ENST00000509995 FGF2P09038 288 aa7.35□□□□□ -1.23
SNF8-207ENST00000509995 HOXA1P49639 335 aaPredicted RBP7.35□□□□□ -1.23
SNF8-207ENST00000509995 MFAP4P55083 255 aa7.35□□□□□ -1.23
SNF8-207ENST00000509995 DHRS2Q13268 280 aa7.35□□□□□ -1.23
SNF8-207ENST00000509995 KIR3DS1Q14943 382 aa7.35□□□□□ -1.23
SNF8-207ENST00000509995 RBM48Q5RL73 367 aaKnown RBP7.35□□□□□ -1.23
SNF8-207ENST00000509995 SPATA24Q86W54 205 aa7.35□□□□□ -1.23
SNF8-207ENST00000509995 C1orf158Q8N1D5 194 aa7.35□□□□□ -1.23
SNF8-207ENST00000509995 PGLYRP3Q96LB9 341 aa7.35□□□□□ -1.23
SNF8-207ENST00000509995 DERL3Q96Q80 235 aa7.35□□□□□ -1.23
SNF8-207ENST00000509995 TXN2Q99757 166 aa7.35□□□□□ -1.23
SNF8-207ENST00000509995 C7orf50Q9BRJ6 194 aaKnown RBP7.35□□□□□ -1.23
SNF8-207ENST00000509995 PECRQ9BY49 303 aa7.35□□□□□ -1.23
SNF8-207ENST00000509995 SPATA2Q9UM82 520 aa7.35□□□□□ -1.23
SNF8-207ENST00000509995 TNFRSF18Q9Y5U5 241 aa7.35□□□□□ -1.23
SNF8-207ENST00000509995 J3QRK9 145 aa7.34□□□□□ -1.23
SNF8-207ENST00000509995 UPK2O00526 184 aa7.34□□□□□ -1.23
SNF8-207ENST00000509995 GNG7O60262 68 aa7.34□□□□□ -1.23
SNF8-207ENST00000509995 TRAPPC2P0DI81 140 aa7.34□□□□□ -1.23
SNF8-207ENST00000509995 TRAPPC2BP0DI82 140 aa7.34□□□□□ -1.23
SNF8-207ENST00000509995 DCKP27707 260 aa7.34□□□□□ -1.23
SNF8-207ENST00000509995 TMEM50BP56557 158 aa7.34□□□□□ -1.23
SNF8-207ENST00000509995 SNRPD3P62318 126 aaKnown RBP7.34□□□□□ -1.23
SNF8-207ENST00000509995 EIF4EBP1Q13541 118 aaPredicted RBP7.34□□□□□ -1.23
SNF8-207ENST00000509995 NFE4Q86UQ8 179 aa7.34□□□□□ -1.23
SNF8-207ENST00000509995 FAM89BQ8N5H3 189 aa7.34□□□□□ -1.23
SNF8-207ENST00000509995 OR52I1Q8NGK6 324 aa7.34□□□□□ -1.23
SNF8-207ENST00000509995 SLC25A46Q96AG3 418 aa7.34□□□□□ -1.23
SNF8-207ENST00000509995 GPHA2Q96T91 129 aa7.34□□□□□ -1.23
SNF8-207ENST00000509995 AIFM2Q9BRQ8 373 aa7.34□□□□□ -1.23
SNF8-207ENST00000509995 URM1Q9BTM9 101 aaKnown RBP7.34□□□□□ -1.23
SNF8-207ENST00000509995 AMBNQ9NP70 447 aa7.34□□□□□ -1.23
SNF8-207ENST00000509995 TCRBV3S1A0A5B6 114 aa7.33□□□□□ -1.24
SNF8-207ENST00000509995 FAM90A26D6RGX4 464 aa7.33□□□□□ -1.24
SNF8-207ENST00000509995 I3L2K1 104 aa7.33□□□□□ -1.24
SNF8-207ENST00000509995 SLC22A5O76082 557 aa7.33□□□□□ -1.24
SNF8-207ENST00000509995 GAS8-AS1O95177 125 aa7.33□□□□□ -1.24
SNF8-207ENST00000509995 LALBAP00709 142 aa7.33□□□□□ -1.24
SNF8-207ENST00000509995 IGKV3-20P01619 116 aa7.33□□□□□ -1.24
SNF8-207ENST00000509995 C1QBP02746 253 aa7.33□□□□□ -1.24
SNF8-207ENST00000509995 MT1HL1P0DM35 61 aa7.33□□□□□ -1.24
SNF8-207ENST00000509995 NPPCP23582 126 aa7.33□□□□□ -1.24
SNF8-207ENST00000509995 HSP90B2PQ58FF3 399 aa7.33□□□□□ -1.24
SNF8-207ENST00000509995 GDF5OSQ5U4N7 250 aa7.33□□□□□ -1.24
SNF8-207ENST00000509995 ZNF600Q6ZNG1 722 aa7.33□□□□□ -1.24
SNF8-207ENST00000509995 ZNF114Q8NC26 417 aa7.33□□□□□ -1.24
SNF8-207ENST00000509995 OR4C16Q8NGL9 310 aa7.33□□□□□ -1.24
SNF8-207ENST00000509995 MAFIPQ8WZ33 124 aa7.33□□□□□ -1.24
SNF8-207ENST00000509995 LSM10Q969L4 123 aaKnown RBP7.33□□□□□ -1.24
SNF8-207ENST00000509995 A0A1B0GU03 582 aa7.32□□□□□ -1.24
SNF8-207ENST00000509995 SAC3D1A6NKF1 404 aa7.32□□□□□ -1.24
SNF8-207ENST00000509995 BPNT1O95861 308 aa7.32□□□□□ -1.24
SNF8-207ENST00000509995 IGHV3-48P01763 117 aa7.32□□□□□ -1.24
SNF8-207ENST00000509995 CRYBB3P26998 211 aa7.32□□□□□ -1.24
SNF8-207ENST00000509995 EIF2B2P49770 351 aaKnown RBP7.32□□□□□ -1.24
SNF8-207ENST00000509995 MRPS15P82914 257 aaKnown RBP7.32□□□□□ -1.24
SNF8-207ENST00000509995 POU2AF1Q16633 256 aa7.32□□□□□ -1.24
SNF8-207ENST00000509995 ACSM3Q53FZ2 586 aa7.32□□□□□ -1.24
SNF8-207ENST00000509995 PLAC9Q5JTB6 97 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms