RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 RBPMS2Q6ZRY4 209 aaKnown RBP9.69□□□□□ -0.86
HMGCS1-205ENST00000508319 OR5B3Q8NH48 314 aa9.69□□□□□ -0.86
HMGCS1-205ENST00000508319 SCARB1Q8WTV0 552 aa9.69□□□□□ -0.86
HMGCS1-205ENST00000508319 ZNF414Q96IQ9 312 aa9.69□□□□□ -0.86
HMGCS1-205ENST00000508319 ATP6V0BQ99437 205 aa9.69□□□□□ -0.86
HMGCS1-205ENST00000508319 SPAG8Q99932 426 aaPredicted RBP9.69□□□□□ -0.86
HMGCS1-205ENST00000508319 FUNDC2Q9BWH2 189 aa9.69□□□□□ -0.86
HMGCS1-205ENST00000508319 SCPEP1Q9HB40 452 aa9.69□□□□□ -0.86
HMGCS1-205ENST00000508319 COMMD3Q9UBI1 195 aa9.69□□□□□ -0.86
HMGCS1-205ENST00000508319 PRNDQ9UKY0 176 aa9.69□□□□□ -0.86
HMGCS1-205ENST00000508319 IGHV3OR16-8A0A075B7F1 116 aa9.68□□□□□ -0.86
HMGCS1-205ENST00000508319 NDUFA4O00483 81 aa9.68□□□□□ -0.86
HMGCS1-205ENST00000508319 TSPAN4O14817 238 aa9.68□□□□□ -0.86
HMGCS1-205ENST00000508319 SNAPC5O75971 98 aa9.68□□□□□ -0.86
HMGCS1-205ENST00000508319 IGKV1-39P01597 117 aa9.68□□□□□ -0.86
HMGCS1-205ENST00000508319 IGKV1D-39P04432 117 aa9.68□□□□□ -0.86
HMGCS1-205ENST00000508319 TBC1D26Q86UD7 250 aa9.68□□□□□ -0.86
HMGCS1-205ENST00000508319 SNX29P2Q8IUI4 249 aa9.68□□□□□ -0.86
HMGCS1-205ENST00000508319 OR2C3Q8N628 320 aa9.68□□□□□ -0.86
HMGCS1-205ENST00000508319 UBAC2Q8NBM4 344 aa9.68□□□□□ -0.86
HMGCS1-205ENST00000508319 IL17DQ8TAD2 202 aa9.68□□□□□ -0.86
HMGCS1-205ENST00000508319 SEC22AQ96IW7 307 aa9.68□□□□□ -0.86
HMGCS1-205ENST00000508319 CMTM3Q96MX0 182 aa9.68□□□□□ -0.86
HMGCS1-205ENST00000508319 TSC22D3Q99576 134 aa9.68□□□□□ -0.86
HMGCS1-205ENST00000508319 OVOL2Q9BRP0 275 aa9.68□□□□□ -0.86
HMGCS1-205ENST00000508319 FAM212BQ9NTI7 297 aaPredicted RBP9.68□□□□□ -0.86
HMGCS1-205ENST00000508319 ELK1P19419 428 aa9.67□□□□□ -0.86
HMGCS1-205ENST00000508319 RCVRNP35243 200 aa9.67□□□□□ -0.86
HMGCS1-205ENST00000508319 VBP1P61758 197 aa9.67□□□□□ -0.86
HMGCS1-205ENST00000508319 TSPAN5P62079 268 aa9.67□□□□□ -0.86
HMGCS1-205ENST00000508319 ODF3L2Q3SX64 289 aa9.67□□□□□ -0.86
HMGCS1-205ENST00000508319 LPCAT3Q6P1A2 487 aa9.67□□□□□ -0.86
HMGCS1-205ENST00000508319 OR1P1Q8NH06 330 aa9.67□□□□□ -0.86
HMGCS1-205ENST00000508319 TMEM56Q96MV1 263 aa9.67□□□□□ -0.86
HMGCS1-205ENST00000508319 SMIM31A0A1B0GVY4 71 aa9.66□□□□□ -0.86
HMGCS1-205ENST00000508319 C15orf62A8K5M9 175 aa9.66□□□□□ -0.86
HMGCS1-205ENST00000508319 ZNF207O43670 478 aaKnown RBP9.66□□□□□ -0.86
HMGCS1-205ENST00000508319 HPGDSO60760 199 aa9.66□□□□□ -0.86
HMGCS1-205ENST00000508319 JTBO76095 146 aa9.66□□□□□ -0.86
HMGCS1-205ENST00000508319 CTSGP08311 255 aa9.66□□□□□ -0.86
HMGCS1-205ENST00000508319 UCP3P55916 312 aa9.66□□□□□ -0.86
HMGCS1-205ENST00000508319 Q56UQ5 140 aa9.66□□□□□ -0.86
HMGCS1-205ENST00000508319 SLC38A6Q8IZM9 456 aa9.66□□□□□ -0.86
HMGCS1-205ENST00000508319 ZNF114Q8NC26 417 aa9.66□□□□□ -0.86
HMGCS1-205ENST00000508319 MRGPRFQ96AM1 343 aa9.66□□□□□ -0.86
HMGCS1-205ENST00000508319 C20orf24Q9BUV8 137 aa9.66□□□□□ -0.86
HMGCS1-205ENST00000508319 FKBP11Q9NYL4 201 aa9.66□□□□□ -0.86
HMGCS1-205ENST00000508319 UBQLN2Q9UHD9 624 aa9.66□□□□□ -0.86
HMGCS1-205ENST00000508319 BIRC6Q9NR09 4857 aa9.66□□□□□ -0.86
HMGCS1-205ENST00000508319 I3L2K1 104 aa9.65□□□□□ -0.86
HMGCS1-205ENST00000508319 K7EMT4 169 aa9.65□□□□□ -0.86
HMGCS1-205ENST00000508319 M0QYG6 137 aa9.65□□□□□ -0.86
HMGCS1-205ENST00000508319 S100GP29377 79 aa9.65□□□□□ -0.86
HMGCS1-205ENST00000508319 FCGR2BP31994 310 aaPredicted RBP9.65□□□□□ -0.86
HMGCS1-205ENST00000508319 PRCDQ00LT1 54 aa9.65□□□□□ -0.86
HMGCS1-205ENST00000508319 APOC4P55056 127 aa9.64□□□□□ -0.87
HMGCS1-205ENST00000508319 DEFB135Q30KP9 77 aa9.64□□□□□ -0.87
HMGCS1-205ENST00000508319 LAMTOR1Q6IAA8 161 aa9.64□□□□□ -0.87
HMGCS1-205ENST00000508319 Q6ZWC4 215 aa9.64□□□□□ -0.87
HMGCS1-205ENST00000508319 H2BFWTQ7Z2G1 175 aa9.64□□□□□ -0.87
HMGCS1-205ENST00000508319 LHFPL1Q86WI0 220 aa9.64□□□□□ -0.87
HMGCS1-205ENST00000508319 WFDC3Q8IUB2 231 aa9.64□□□□□ -0.87
HMGCS1-205ENST00000508319 OR4A16Q8NH70 328 aa9.64□□□□□ -0.87
HMGCS1-205ENST00000508319 MISP3Q96FF7 219 aa9.64□□□□□ -0.87
HMGCS1-205ENST00000508319 OR10C1Q96KK4 312 aa9.64□□□□□ -0.87
HMGCS1-205ENST00000508319 RNF2Q99496 336 aa9.64□□□□□ -0.87
HMGCS1-205ENST00000508319 SMPXQ9UHP9 88 aa9.64□□□□□ -0.87
HMGCS1-205ENST00000508319 TP53TG1Q9Y2A0 90 aa9.64□□□□□ -0.87
HMGCS1-205ENST00000508319 IGHV7-4-1A0A0J9YVY3 117 aa9.63□□□□□ -0.87
HMGCS1-205ENST00000508319 A0A0J9YWU9 116 aa9.63□□□□□ -0.87
HMGCS1-205ENST00000508319 OR4C46A6NHA9 309 aa9.63□□□□□ -0.87
HMGCS1-205ENST00000508319 NUPL2O15504 423 aaKnown RBP9.63□□□□□ -0.87
HMGCS1-205ENST00000508319 CTSDP07339 412 aaPredicted RBP9.63□□□□□ -0.87
HMGCS1-205ENST00000508319 RORCP51449 518 aa9.63□□□□□ -0.87
HMGCS1-205ENST00000508319 RND3P61587 244 aa9.63□□□□□ -0.87
HMGCS1-205ENST00000508319 EWSR1Q01844 656 aaKnown RBP eCLIP9.63□□□□□ -0.87
HMGCS1-205ENST00000508319 RELQ04864 619 aaPredicted RBP9.63□□□□□ -0.87
HMGCS1-205ENST00000508319 IZUMO4Q1ZYL8 232 aa9.63□□□□□ -0.87
HMGCS1-205ENST00000508319 RNASE12Q5GAN4 147 aaKnown RBP9.63□□□□□ -0.87
HMGCS1-205ENST00000508319 TXN2Q99757 166 aa9.63□□□□□ -0.87
HMGCS1-205ENST00000508319 NXF2Q9GZY0 626 aaKnown RBP9.63□□□□□ -0.87
HMGCS1-205ENST00000508319 KLK11Q9UBX7 282 aa9.63□□□□□ -0.87
HMGCS1-205ENST00000508319 KIR2DL5BA0A0G2JN68 375 aa9.62□□□□□ -0.87
HMGCS1-205ENST00000508319 KIR2DL5BA0A0G2JPC4 375 aa9.62□□□□□ -0.87
HMGCS1-205ENST00000508319 CHEK1O14757 476 aa9.62□□□□□ -0.87
HMGCS1-205ENST00000508319 GABARAPO95166 117 aa9.62□□□□□ -0.87
HMGCS1-205ENST00000508319 MT-CO2P00403 227 aa9.62□□□□□ -0.87
HMGCS1-205ENST00000508319 IGKV1-5P01602 117 aa9.62□□□□□ -0.87
HMGCS1-205ENST00000508319 IGHV3-48P01763 117 aa9.62□□□□□ -0.87
HMGCS1-205ENST00000508319 P0C879 139 aa9.62□□□□□ -0.87
HMGCS1-205ENST00000508319 SMIM18P0DKX4 95 aa9.62□□□□□ -0.87
HMGCS1-205ENST00000508319 PI3P19957 117 aa9.62□□□□□ -0.87
HMGCS1-205ENST00000508319 BMI1P35226 326 aa9.62□□□□□ -0.87
HMGCS1-205ENST00000508319 MFAP4P55083 255 aa9.62□□□□□ -0.87
HMGCS1-205ENST00000508319 HSPE1P61604 102 aaKnown RBP9.62□□□□□ -0.87
HMGCS1-205ENST00000508319 TNFRSF9Q07011 255 aa9.62□□□□□ -0.87
HMGCS1-205ENST00000508319 CTF1Q16619 201 aa9.62□□□□□ -0.87
HMGCS1-205ENST00000508319 KIR2DL5AQ8N109 375 aa9.62□□□□□ -0.87
HMGCS1-205ENST00000508319 OR52I2Q8NH67 350 aa9.62□□□□□ -0.87
HMGCS1-205ENST00000508319 KIR2DL5BQ8NHK3 375 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms