RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 GNB1P62873 340 aa11.81□□□□□ -0.52
DDX41-208ENST00000507955 ACOT6Q3I5F7 207 aaPredicted RBP11.81□□□□□ -0.52
DDX41-208ENST00000507955 DNLZQ5SXM8 178 aa11.81□□□□□ -0.52
DDX41-208ENST00000507955 ZNF114Q8NC26 417 aa11.81□□□□□ -0.52
DDX41-208ENST00000507955 TMEM37Q8WXS4 190 aa11.81□□□□□ -0.52
DDX41-208ENST00000507955 CORO2AQ92828 525 aa11.81□□□□□ -0.52
DDX41-208ENST00000507955 ZNF714Q96N38 554 aa11.81□□□□□ -0.52
DDX41-208ENST00000507955 OR5B12Q96R08 314 aa11.81□□□□□ -0.52
DDX41-208ENST00000507955 ABCA1O95477 2261 aa11.8□□□□□ -0.52
DDX41-208ENST00000507955 A0A1W2PPV4 95 aa11.8□□□□□ -0.52
DDX41-208ENST00000507955 FAM90A9PA6NNJ1 464 aa11.8□□□□□ -0.52
DDX41-208ENST00000507955 DDTP30046 118 aa11.8□□□□□ -0.52
DDX41-208ENST00000507955 CHRNB4P30926 498 aa11.8□□□□□ -0.52
DDX41-208ENST00000507955 KIR2DS2P43631 304 aa11.8□□□□□ -0.52
DDX41-208ENST00000507955 FAM3BP58499 235 aaPredicted RBP11.8□□□□□ -0.52
DDX41-208ENST00000507955 PKIAP61925 76 aa11.8□□□□□ -0.52
DDX41-208ENST00000507955 JOSD1Q15040 202 aaPredicted RBP11.8□□□□□ -0.52
DDX41-208ENST00000507955 NCOR1P1Q9H4R4 102 aa11.8□□□□□ -0.52
DDX41-208ENST00000507955 ARHGAP32A7KAX9 2087 aa11.8□□□□□ -0.52
DDX41-208ENST00000507955 ITPR1Q14643 2758 aa11.8□□□□□ -0.52
DDX41-208ENST00000507955 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.8□□□□□ -0.52
DDX41-208ENST00000507955 ITGB1BP1O14713 200 aa11.8□□□□□ -0.52
DDX41-208ENST00000507955 GGCTO75223 188 aaKnown RBP11.8□□□□□ -0.52
DDX41-208ENST00000507955 FOXH1O75593 365 aa11.8□□□□□ -0.52
DDX41-208ENST00000507955 IGHV3-48P01763 117 aa11.8□□□□□ -0.52
DDX41-208ENST00000507955 ARL14EPLP0DKL9 152 aa11.8□□□□□ -0.52
DDX41-208ENST00000507955 IGFBP2P18065 325 aa11.8□□□□□ -0.52
DDX41-208ENST00000507955 COA6Q5JTJ3 125 aaKnown RBP11.8□□□□□ -0.52
DDX41-208ENST00000507955 ACTL10Q5JWF8 245 aa11.8□□□□□ -0.52
DDX41-208ENST00000507955 RITA1Q96K30 269 aa11.8□□□□□ -0.52
DDX41-208ENST00000507955 LINC00574Q9H8X3 128 aa11.8□□□□□ -0.52
DDX41-208ENST00000507955 FOXA2Q9Y261 457 aaPredicted RBP11.8□□□□□ -0.52
DDX41-208ENST00000507955 IGHV3-72A0A0B4J1Y9 119 aa11.79□□□□□ -0.52
DDX41-208ENST00000507955 ACTL6BO94805 426 aa11.79□□□□□ -0.52
DDX41-208ENST00000507955 LINC01551Q86U37 167 aa11.79□□□□□ -0.52
DDX41-208ENST00000507955 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.79□□□□□ -0.52
DDX41-208ENST00000507955 OR2T10Q8NGZ9 312 aa11.79□□□□□ -0.52
DDX41-208ENST00000507955 OR5R1Q8NH85 324 aa11.79□□□□□ -0.52
DDX41-208ENST00000507955 DIRC2Q96SL1 478 aa11.79□□□□□ -0.52
DDX41-208ENST00000507955 VPS13CQ709C8 3753 aa11.79□□□□□ -0.52
DDX41-208ENST00000507955 MED13LQ71F56 2210 aa11.79□□□□□ -0.52
DDX41-208ENST00000507955 A0A087X0M5 115 aa11.79□□□□□ -0.52
DDX41-208ENST00000507955 TEX50A0A1B0GTY4 177 aa11.79□□□□□ -0.52
DDX41-208ENST00000507955 A0A1B0GX30 115 aa11.79□□□□□ -0.52
DDX41-208ENST00000507955 LY6HO94772 140 aa11.79□□□□□ -0.52
DDX41-208ENST00000507955 C1QTNF9P0C862 333 aa11.79□□□□□ -0.52
DDX41-208ENST00000507955 PAX1P15863 534 aa11.79□□□□□ -0.52
DDX41-208ENST00000507955 RPP30P78346 268 aaKnown RBP11.79□□□□□ -0.52
DDX41-208ENST00000507955 C10orf55Q5SWW7 151 aa11.79□□□□□ -0.52
DDX41-208ENST00000507955 RNASEH2CQ8TDP1 164 aaKnown RBP11.79□□□□□ -0.52
DDX41-208ENST00000507955 ENY2Q9NPA8 101 aa11.79□□□□□ -0.52
DDX41-208ENST00000507955 IGKV1OR2-108A0A075B7D4 117 aa11.78□□□□□ -0.52
DDX41-208ENST00000507955 IL6RP08887 468 aaPredicted RBP11.78□□□□□ -0.52
DDX41-208ENST00000507955 ANAPC16Q96DE5 110 aa11.78□□□□□ -0.52
DDX41-208ENST00000507955 NPVFQ9HCQ7 196 aa11.78□□□□□ -0.52
DDX41-208ENST00000507955 ZFHX3Q15911 3703 aa11.78□□□□□ -0.52
DDX41-208ENST00000507955 TRBV20OR9-2A0A075B6H5 130 aa11.78□□□□□ -0.52
DDX41-208ENST00000507955 UPK2O00526 184 aa11.78□□□□□ -0.52
DDX41-208ENST00000507955 NDUFB3O43676 98 aa11.78□□□□□ -0.52
DDX41-208ENST00000507955 NDUFB4O95168 129 aa11.78□□□□□ -0.52
DDX41-208ENST00000507955 HNF1AP20823 631 aa11.78□□□□□ -0.52
DDX41-208ENST00000507955 PDLIM4P50479 330 aa11.78□□□□□ -0.52
DDX41-208ENST00000507955 RTL8BQ17RB0 113 aa11.78□□□□□ -0.52
DDX41-208ENST00000507955 REC114Q7Z4M0 266 aa11.78□□□□□ -0.52
DDX41-208ENST00000507955 STPG3Q8N7X2 389 aa11.78□□□□□ -0.52
DDX41-208ENST00000507955 OR10X1Q8NGY0 326 aa11.78□□□□□ -0.52
DDX41-208ENST00000507955 HARBI1Q96MB7 349 aa11.78□□□□□ -0.52
DDX41-208ENST00000507955 GAL3ST2Q9H3Q3 398 aa11.78□□□□□ -0.52
DDX41-208ENST00000507955 RAB9BQ9NP90 201 aa11.78□□□□□ -0.52
DDX41-208ENST00000507955 LSM4Q9Y4Z0 139 aaKnown RBP11.78□□□□□ -0.52
DDX41-208ENST00000507955 AKAP6Q13023 2319 aa11.78□□□□□ -0.52
DDX41-208ENST00000507955 A0A1B0GUS0 222 aa11.77□□□□□ -0.52
DDX41-208ENST00000507955 A0A1B0GV90 55 aa11.77□□□□□ -0.52
DDX41-208ENST00000507955 SIAH2O43255 324 aa11.77□□□□□ -0.52
DDX41-208ENST00000507955 IL3RAP26951 378 aa11.77□□□□□ -0.52
DDX41-208ENST00000507955 LOXP28300 417 aaPredicted RBP11.77□□□□□ -0.52
DDX41-208ENST00000507955 OPRK1P41145 380 aa11.77□□□□□ -0.52
DDX41-208ENST00000507955 FAM78BQ5VT40 261 aa11.77□□□□□ -0.52
DDX41-208ENST00000507955 ZNF664Q8N3J9 261 aa11.77□□□□□ -0.52
DDX41-208ENST00000507955 PLEKHA3Q9HB20 300 aa11.77□□□□□ -0.52
DDX41-208ENST00000507955 VENTXO95231 258 aa11.77□□□□□ -0.53
DDX41-208ENST00000507955 APELAP0DMC3 54 aa11.77□□□□□ -0.53
DDX41-208ENST00000507955 TEPPQ6URK8 271 aa11.77□□□□□ -0.53
DDX41-208ENST00000507955 ZNF833PQ6ZTB9 187 aa11.77□□□□□ -0.53
DDX41-208ENST00000507955 ADTRPQ96IZ2 230 aa11.77□□□□□ -0.53
DDX41-208ENST00000507955 TSTD3H0UI37 97 aa11.76□□□□□ -0.53
DDX41-208ENST00000507955 H0YJW9 148 aa11.76□□□□□ -0.53
DDX41-208ENST00000507955 TNFRSF13BO14836 293 aaPredicted RBP11.76□□□□□ -0.53
DDX41-208ENST00000507955 TYMSP04818 313 aa11.76□□□□□ -0.53
DDX41-208ENST00000507955 TMPRSS3P57727 454 aa11.76□□□□□ -0.53
DDX41-208ENST00000507955 LRRC10Q5BKY1 277 aa11.76□□□□□ -0.53
DDX41-208ENST00000507955 FAM216AQ8WUB2 273 aa11.76□□□□□ -0.53
DDX41-208ENST00000507955 TPSG1Q9NRR2 321 aa11.76□□□□□ -0.53
DDX41-208ENST00000507955 SRP14P37108 136 aaKnown RBP11.76□□□□□ -0.53
DDX41-208ENST00000507955 EFNB3Q15768 340 aa11.76□□□□□ -0.53
DDX41-208ENST00000507955 IGHV1-69-2A0A0G2JMI3 117 aa11.75□□□□□ -0.53
DDX41-208ENST00000507955 RNF224P0DH78 156 aa11.75□□□□□ -0.53
DDX41-208ENST00000507955 RPL15P61313 204 aaKnown RBP11.75□□□□□ -0.53
DDX41-208ENST00000507955 PRCDQ00LT1 54 aa11.75□□□□□ -0.53
DDX41-208ENST00000507955 IGFBPL1Q8WX77 278 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms