RNA–Protein interactions for RNA: ENST00000496081.5

HLA-A-208, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,786 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-208ENST00000496081 HECTD1Q9ULT8 2610 aa13.09□□□□□ -0.31
HLA-A-208ENST00000496081 SVEP1Q4LDE5 3571 aa13.08□□□□□ -0.32
HLA-A-208ENST00000496081 SMCO3A2RU48 225 aa13.08□□□□□ -0.32
HLA-A-208ENST00000496081 OR13C7P0DN81 318 aa13.08□□□□□ -0.32
HLA-A-208ENST00000496081 RPL27AP46776 148 aaKnown RBP13.08□□□□□ -0.32
HLA-A-208ENST00000496081 GNB1P62873 340 aa13.08□□□□□ -0.32
HLA-A-208ENST00000496081 SSBP2P81877 361 aaPredicted RBP13.08□□□□□ -0.32
HLA-A-208ENST00000496081 EBI3Q14213 229 aa13.08□□□□□ -0.32
HLA-A-208ENST00000496081 PLGLAQ15195 96 aa13.08□□□□□ -0.32
HLA-A-208ENST00000496081 DEFB113Q30KQ7 82 aa13.08□□□□□ -0.32
HLA-A-208ENST00000496081 ARSJQ5FYB0 599 aaPredicted RBP13.08□□□□□ -0.32
HLA-A-208ENST00000496081 NAV3Q8IVL0 2385 aa13.08□□□□□ -0.32
HLA-A-208ENST00000496081 IGLC7A0M8Q6 106 aa13.07□□□□□ -0.32
HLA-A-208ENST00000496081 B4DSR2 109 aa13.07□□□□□ -0.32
HLA-A-208ENST00000496081 TSPAN15O95858 294 aa13.07□□□□□ -0.32
HLA-A-208ENST00000496081 DPPA3Q6W0C5 159 aa13.07□□□□□ -0.32
HLA-A-208ENST00000496081 Q8N6K4 173 aa13.07□□□□□ -0.32
HLA-A-208ENST00000496081 NPVFQ9HCQ7 196 aa13.07□□□□□ -0.32
HLA-A-208ENST00000496081 RPRMQ9NS64 109 aa13.07□□□□□ -0.32
HLA-A-208ENST00000496081 AGPAT2O15120 278 aa13.07□□□□□ -0.32
HLA-A-208ENST00000496081 SRSF3P84103 164 aaKnown RBP13.07□□□□□ -0.32
HLA-A-208ENST00000496081 C1orf159Q96HA4 380 aa13.07□□□□□ -0.32
HLA-A-208ENST00000496081 P2RX4Q99571 388 aa13.07□□□□□ -0.32
HLA-A-208ENST00000496081 KIAA1456Q9P272 454 aa13.07□□□□□ -0.32
HLA-A-208ENST00000496081 BAHCC1Q9P281 2608 aa13.06□□□□□ -0.32
HLA-A-208ENST00000496081 ELLP55199 621 aaPredicted RBP13.06□□□□□ -0.32
HLA-A-208ENST00000496081 RUSC1-AS1Q66K80 236 aa13.06□□□□□ -0.32
HLA-A-208ENST00000496081 ACSM6Q6P461 480 aa13.06□□□□□ -0.32
HLA-A-208ENST00000496081 UQCC3Q6UW78 93 aa13.06□□□□□ -0.32
HLA-A-208ENST00000496081 LRRC75A-AS1Q8N1F1 130 aa13.06□□□□□ -0.32
HLA-A-208ENST00000496081 ZNF709Q8N972 641 aa13.06□□□□□ -0.32
HLA-A-208ENST00000496081 APCP25054 2843 aa13.06□□□□□ -0.32
HLA-A-208ENST00000496081 NAV2Q8IVL1 2488 aa13.06□□□□□ -0.32
HLA-A-208ENST00000496081 IGHV3OR16-10A0A075B7F0 116 aa13.05□□□□□ -0.32
HLA-A-208ENST00000496081 TRAV40A0A0B4J280 105 aa13.05□□□□□ -0.32
HLA-A-208ENST00000496081 IGHV1-69DA0A0B4J2H0 117 aa13.05□□□□□ -0.32
HLA-A-208ENST00000496081 TEX22C9J3V5 150 aa13.05□□□□□ -0.32
HLA-A-208ENST00000496081 FNDC10F2Z333 226 aa13.05□□□□□ -0.32
HLA-A-208ENST00000496081 C17orf112F2Z3M2 114 aa13.05□□□□□ -0.32
HLA-A-208ENST00000496081 MPDU1O75352 247 aa13.05□□□□□ -0.32
HLA-A-208ENST00000496081 IGHV1-69P01742 117 aa13.05□□□□□ -0.32
HLA-A-208ENST00000496081 REG1AP05451 166 aa13.05□□□□□ -0.32
HLA-A-208ENST00000496081 H2AFB1P0C5Y9 115 aa13.05□□□□□ -0.32
HLA-A-208ENST00000496081 AREGP15514 252 aa13.05□□□□□ -0.32
HLA-A-208ENST00000496081 TMEM41BQ5BJD5 291 aa13.05□□□□□ -0.32
HLA-A-208ENST00000496081 FAM120AOSQ5T036 256 aa13.05□□□□□ -0.32
HLA-A-208ENST00000496081 SPSB3Q6PJ21 355 aa13.05□□□□□ -0.32
HLA-A-208ENST00000496081 SRSF12Q8WXF0 261 aaKnown RBP13.05□□□□□ -0.32
HLA-A-208ENST00000496081 LINC00052Q96N35 136 aa13.05□□□□□ -0.32
HLA-A-208ENST00000496081 C7orf69Q9H7B7 122 aa13.05□□□□□ -0.32
HLA-A-208ENST00000496081 HIF1ANQ9NWT6 349 aa13.05□□□□□ -0.32
HLA-A-208ENST00000496081 LSM4Q9Y4Z0 139 aaKnown RBP13.05□□□□□ -0.32
HLA-A-208ENST00000496081 A0A1B0GV50 99 aa13.04□□□□□ -0.32
HLA-A-208ENST00000496081 SUB1P53999 127 aaKnown RBP eCLIP13.04□□□□□ -0.32
HLA-A-208ENST00000496081 AKR1C1Q04828 323 aa13.04□□□□□ -0.32
HLA-A-208ENST00000496081 MLANAQ16655 118 aa13.04□□□□□ -0.32
HLA-A-208ENST00000496081 C5orf64Q2M2E5 130 aa13.04□□□□□ -0.32
HLA-A-208ENST00000496081 MRPL41Q8IXM3 137 aaKnown RBP13.04□□□□□ -0.32
HLA-A-208ENST00000496081 BPIFCQ8NFQ6 507 aa13.04□□□□□ -0.32
HLA-A-208ENST00000496081 MGST2Q99735 147 aa13.04□□□□□ -0.32
HLA-A-208ENST00000496081 FAM106CPP0CH98 169 aa13.04□□□□□ -0.32
HLA-A-208ENST00000496081 APELAP0DMC3 54 aa13.04□□□□□ -0.32
HLA-A-208ENST00000496081 TMEM11P17152 192 aa13.04□□□□□ -0.32
HLA-A-208ENST00000496081 ZP3P21754 424 aa13.04□□□□□ -0.32
HLA-A-208ENST00000496081 BRS3P32247 399 aa13.04□□□□□ -0.32
HLA-A-208ENST00000496081 RAB2AP61019 212 aa13.04□□□□□ -0.32
HLA-A-208ENST00000496081 CD69Q07108 199 aa13.04□□□□□ -0.32
HLA-A-208ENST00000496081 ZNF726P1Q15940 193 aa13.04□□□□□ -0.32
HLA-A-208ENST00000496081 FFAR4Q5NUL3 377 aa13.04□□□□□ -0.32
HLA-A-208ENST00000496081 TEPPQ6URK8 271 aa13.04□□□□□ -0.32
HLA-A-208ENST00000496081 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.03□□□□□ -0.32
HLA-A-208ENST00000496081 TRAV20A0A0B4J274 112 aa13.03□□□□□ -0.32
HLA-A-208ENST00000496081 NCBP2LA6PVI3 153 aaKnown RBP13.03□□□□□ -0.32
HLA-A-208ENST00000496081 KRBOX1C9JBD0 128 aa13.03□□□□□ -0.32
HLA-A-208ENST00000496081 IGHV4-38-2P0DP08 117 aa13.03□□□□□ -0.32
HLA-A-208ENST00000496081 CCL20P78556 96 aa13.03□□□□□ -0.32
HLA-A-208ENST00000496081 GAMTQ14353 236 aa13.03□□□□□ -0.32
HLA-A-208ENST00000496081 Q5PR19 223 aa13.03□□□□□ -0.32
HLA-A-208ENST00000496081 BRD3OSQ6XYD6 125 aa13.03□□□□□ -0.32
HLA-A-208ENST00000496081 RPP25LQ8N5L8 163 aaKnown RBP13.03□□□□□ -0.32
HLA-A-208ENST00000496081 COMMD1Q8N668 190 aa13.03□□□□□ -0.32
HLA-A-208ENST00000496081 LINC01356Q8N9X3 169 aa13.03□□□□□ -0.32
HLA-A-208ENST00000496081 ZNF114Q8NC26 417 aa13.03□□□□□ -0.32
HLA-A-208ENST00000496081 RNASEH2CQ8TDP1 164 aaKnown RBP13.03□□□□□ -0.32
HLA-A-208ENST00000496081 SFT2D1Q8WV19 159 aa13.03□□□□□ -0.32
HLA-A-208ENST00000496081 GGTLC1Q9BX51 225 aa13.03□□□□□ -0.32
HLA-A-208ENST00000496081 TMEM231Q9H6L2 316 aa13.03□□□□□ -0.32
HLA-A-208ENST00000496081 FAM96BQ9Y3D0 163 aa13.03□□□□□ -0.32
HLA-A-208ENST00000496081 CNIH1O95406 144 aa13.02□□□□□ -0.32
HLA-A-208ENST00000496081 GATA3P23771 443 aa13.02□□□□□ -0.32
HLA-A-208ENST00000496081 MFAP2P55001 183 aa13.02□□□□□ -0.32
HLA-A-208ENST00000496081 LOXL1Q08397 574 aaPredicted RBP13.02□□□□□ -0.32
HLA-A-208ENST00000496081 PVRIGQ6DKI7 326 aa13.02□□□□□ -0.32
HLA-A-208ENST00000496081 SSX7Q7RTT5 188 aa13.02□□□□□ -0.32
HLA-A-208ENST00000496081 TMEM144Q7Z5S9 345 aa13.02□□□□□ -0.32
HLA-A-208ENST00000496081 CACNG8Q8WXS5 425 aa13.02□□□□□ -0.32
HLA-A-208ENST00000496081 RCC1LQ96I51 464 aaKnown RBP13.02□□□□□ -0.32
HLA-A-208ENST00000496081 SCRT1Q9BWW7 348 aa13.02□□□□□ -0.32
HLA-A-208ENST00000496081 RNF223E7ERA6 249 aa13.02□□□□□ -0.33
HLA-A-208ENST00000496081 AVPP01185 164 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms