RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 OR4A16Q8NH70 328 aa6.56□□□□□ -1.36
NUP50-217ENST00000491860 KIR2DL5BQ8NHK3 375 aa6.56□□□□□ -1.36
NUP50-217ENST00000491860 GPX8Q8TED1 209 aa6.56□□□□□ -1.36
NUP50-217ENST00000491860 FCAMRQ8WWV6 532 aa6.56□□□□□ -1.36
NUP50-217ENST00000491860 CACNG8Q8WXS5 425 aa6.56□□□□□ -1.36
NUP50-217ENST00000491860 YIPF6Q96EC8 236 aa6.56□□□□□ -1.36
NUP50-217ENST00000491860 ZNF486Q96H40 463 aaPredicted RBP6.56□□□□□ -1.36
NUP50-217ENST00000491860 HINT2Q9BX68 163 aa6.56□□□□□ -1.36
NUP50-217ENST00000491860 TRAV3A0A0B4J244 114 aa6.55□□□□□ -1.36
NUP50-217ENST00000491860 OR2T8A6NH00 312 aa6.55□□□□□ -1.36
NUP50-217ENST00000491860 C15orf61A6NNL5 157 aa6.55□□□□□ -1.36
NUP50-217ENST00000491860 NUPL2O15504 423 aaKnown RBP6.55□□□□□ -1.36
NUP50-217ENST00000491860 SCGB2A1O75556 95 aa6.55□□□□□ -1.36
NUP50-217ENST00000491860 B3GALNT1O75752 331 aa6.55□□□□□ -1.36
NUP50-217ENST00000491860 SCAF4O95104 1147 aaKnown RBP6.55□□□□□ -1.36
NUP50-217ENST00000491860 FCER2P06734 321 aa6.55□□□□□ -1.36
NUP50-217ENST00000491860 ATF4P18848 351 aaPredicted RBP6.55□□□□□ -1.36
NUP50-217ENST00000491860 TBPP20226 339 aa6.55□□□□□ -1.36
NUP50-217ENST00000491860 HRH1P35367 487 aa6.55□□□□□ -1.36
NUP50-217ENST00000491860 G6PCP35575 357 aa6.55□□□□□ -1.36
NUP50-217ENST00000491860 WT1-ASQ06250 92 aa6.55□□□□□ -1.36
NUP50-217ENST00000491860 Q56UQ5 140 aa6.55□□□□□ -1.36
NUP50-217ENST00000491860 MZT2AQ6P582 158 aa6.55□□□□□ -1.36
NUP50-217ENST00000491860 UNQ9165/PRO28630Q6UXU0 137 aa6.55□□□□□ -1.36
NUP50-217ENST00000491860 H2BFWTQ7Z2G1 175 aa6.55□□□□□ -1.36
NUP50-217ENST00000491860 WFDC3Q8IUB2 231 aa6.55□□□□□ -1.36
NUP50-217ENST00000491860 ZNF114Q8NC26 417 aa6.55□□□□□ -1.36
NUP50-217ENST00000491860 OR10W1Q8NGF6 305 aa6.55□□□□□ -1.36
NUP50-217ENST00000491860 SCARB1Q8WTV0 552 aa6.55□□□□□ -1.36
NUP50-217ENST00000491860 AP3S1Q92572 193 aa6.55□□□□□ -1.36
NUP50-217ENST00000491860 FXYD6Q9H0Q3 95 aa6.55□□□□□ -1.36
NUP50-217ENST00000491860 TMEM14BQ9NUH8 114 aa6.55□□□□□ -1.36
NUP50-217ENST00000491860 S4R3C0 116 aa6.55□□□□□ -1.36
NUP50-217ENST00000491860 CORTO00230 105 aa6.54□□□□□ -1.36
NUP50-217ENST00000491860 RORCP51449 518 aa6.54□□□□□ -1.36
NUP50-217ENST00000491860 MFAP4P55083 255 aa6.54□□□□□ -1.36
NUP50-217ENST00000491860 ERHP84090 104 aaKnown RBP6.54□□□□□ -1.36
NUP50-217ENST00000491860 TBC1D26Q86UD7 250 aa6.54□□□□□ -1.36
NUP50-217ENST00000491860 LYSMD2Q8IV50 215 aa6.54□□□□□ -1.36
NUP50-217ENST00000491860 STPG3Q8N7X2 389 aa6.54□□□□□ -1.36
NUP50-217ENST00000491860 UBAC2Q8NBM4 344 aa6.54□□□□□ -1.36
NUP50-217ENST00000491860 GALNT14Q96FL9 552 aa6.54□□□□□ -1.36
NUP50-217ENST00000491860 GINS3Q9BRX5 216 aa6.54□□□□□ -1.36
NUP50-217ENST00000491860 WFDC10AQ9H1F0 79 aa6.54□□□□□ -1.36
NUP50-217ENST00000491860 RETNQ9HD89 108 aa6.54□□□□□ -1.36
NUP50-217ENST00000491860 COMMD3Q9UBI1 195 aa6.54□□□□□ -1.36
NUP50-217ENST00000491860 NUPR2A6NF83 97 aa6.53□□□□□ -1.36
NUP50-217ENST00000491860 SPRY2O43597 315 aa6.53□□□□□ -1.36
NUP50-217ENST00000491860 EIF4EP06730 217 aaKnown RBP6.53□□□□□ -1.36
NUP50-217ENST00000491860 EDN2P20800 178 aa6.53□□□□□ -1.36
NUP50-217ENST00000491860 HLA-DMAP28067 261 aa6.53□□□□□ -1.36
NUP50-217ENST00000491860 NPBWR1P48145 328 aa6.53□□□□□ -1.36
NUP50-217ENST00000491860 SUB1P53999 127 aaKnown RBP eCLIP6.53□□□□□ -1.36
NUP50-217ENST00000491860 RND3P61587 244 aa6.53□□□□□ -1.36
NUP50-217ENST00000491860 HSPE1P61604 102 aaKnown RBP6.53□□□□□ -1.36
NUP50-217ENST00000491860 LSM3P62310 102 aaKnown RBP6.53□□□□□ -1.36
NUP50-217ENST00000491860 PAFAH1B2P68402 229 aa6.53□□□□□ -1.36
NUP50-217ENST00000491860 PRCDQ00LT1 54 aa6.53□□□□□ -1.36
NUP50-217ENST00000491860 TNFRSF9Q07011 255 aa6.53□□□□□ -1.36
NUP50-217ENST00000491860 ARRDC1Q8N5I2 433 aa6.53□□□□□ -1.36
NUP50-217ENST00000491860 SEC22AQ96IW7 307 aa6.53□□□□□ -1.36
NUP50-217ENST00000491860 OVOL2Q9BRP0 275 aa6.53□□□□□ -1.36
NUP50-217ENST00000491860 PDCD10Q9BUL8 212 aa6.53□□□□□ -1.36
NUP50-217ENST00000491860 C20orf24Q9BUV8 137 aa6.53□□□□□ -1.36
NUP50-217ENST00000491860 CACFD1Q9UGQ2 172 aa6.53□□□□□ -1.36
NUP50-217ENST00000491860 HERC2O95714 4834 aa6.53□□□□□ -1.36
NUP50-217ENST00000491860 PLECQ15149 4684 aaKnown RBP6.53□□□□□ -1.36
NUP50-217ENST00000491860 ALMS1Q8TCU4 4167 aa6.53□□□□□ -1.36
NUP50-217ENST00000491860 TRAV14DV4A0A0A6YYC5 116 aa6.52□□□□□ -1.37
NUP50-217ENST00000491860 IGHV3-35A0A0C4DH35 117 aa6.52□□□□□ -1.37
NUP50-217ENST00000491860 IGHV7-4-1A0A0J9YVY3 117 aa6.52□□□□□ -1.37
NUP50-217ENST00000491860 INS-IGF2F8WCM5 200 aa6.52□□□□□ -1.37
NUP50-217ENST00000491860 K7EIM0 57 aa6.52□□□□□ -1.37
NUP50-217ENST00000491860 GNG7O60262 68 aa6.52□□□□□ -1.37
NUP50-217ENST00000491860 CTSGP08311 255 aa6.52□□□□□ -1.37
NUP50-217ENST00000491860 TGFBR1P36897 503 aa6.52□□□□□ -1.37
NUP50-217ENST00000491860 PHLDA2Q53GA4 152 aa6.52□□□□□ -1.37
NUP50-217ENST00000491860 RNASE10Q5GAN6 216 aaKnown RBP6.52□□□□□ -1.37
NUP50-217ENST00000491860 SNX29P2Q8IUI4 249 aa6.52□□□□□ -1.37
NUP50-217ENST00000491860 CCDC71LQ8N9Z2 235 aa6.52□□□□□ -1.37
NUP50-217ENST00000491860 TMEM116Q8NCL8 245 aa6.52□□□□□ -1.37
NUP50-217ENST00000491860 ZFAND1Q8TCF1 268 aa6.52□□□□□ -1.37
NUP50-217ENST00000491860 MISP3Q96FF7 219 aa6.52□□□□□ -1.37
NUP50-217ENST00000491860 OR10C1Q96KK4 312 aa6.52□□□□□ -1.37
NUP50-217ENST00000491860 CHRDL1Q9BU40 450 aa6.52□□□□□ -1.37
NUP50-217ENST00000491860 FUNDC2Q9BWH2 189 aa6.52□□□□□ -1.37
NUP50-217ENST00000491860 TMEM231Q9H6L2 316 aa6.52□□□□□ -1.37
NUP50-217ENST00000491860 RABL2AQ9UBK7 228 aaPredicted RBP6.52□□□□□ -1.37
NUP50-217ENST00000491860 SMPXQ9UHP9 88 aa6.52□□□□□ -1.37
NUP50-217ENST00000491860 RABL2BQ9UNT1 228 aa6.52□□□□□ -1.37
NUP50-217ENST00000491860 NSG2Q9Y328 171 aa6.52□□□□□ -1.37
NUP50-217ENST00000491860 TRAV2A0A0B4J234 112 aa6.51□□□□□ -1.37
NUP50-217ENST00000491860 FAM25AB3EWG3 89 aa6.51□□□□□ -1.37
NUP50-217ENST00000491860 FAM25CB3EWG5 89 aa6.51□□□□□ -1.37
NUP50-217ENST00000491860 FAM25GB3EWG6 89 aa6.51□□□□□ -1.37
NUP50-217ENST00000491860 F8W735 103 aaPredicted RBP6.51□□□□□ -1.37
NUP50-217ENST00000491860 I3L2K1 104 aa6.51□□□□□ -1.37
NUP50-217ENST00000491860 YIF1AO95070 293 aa6.51□□□□□ -1.37
NUP50-217ENST00000491860 PGAM2P15259 253 aa6.51□□□□□ -1.37
NUP50-217ENST00000491860 ADMP35318 185 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms