RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 PGLYRP3Q96LB9 341 aa6.47□□□□□ -1.37
SSBP1-212ENST00000489378 MS4A6AQ9H2W1 248 aa6.47□□□□□ -1.37
SSBP1-212ENST00000489378 SMPD3Q9NY59 655 aaPredicted RBP6.47□□□□□ -1.37
SSBP1-212ENST00000489378 RBM7Q9Y580 266 aaKnown RBP6.47□□□□□ -1.37
SSBP1-212ENST00000489378 TRBV6-7A0A0A0MS04 114 aa6.46□□□□□ -1.38
SSBP1-212ENST00000489378 NUPL2O15504 423 aaKnown RBP6.46□□□□□ -1.38
SSBP1-212ENST00000489378 SMR3BP02814 79 aaPredicted RBP6.46□□□□□ -1.38
SSBP1-212ENST00000489378 UBBP0CG47 229 aa6.46□□□□□ -1.38
SSBP1-212ENST00000489378 SPART-AS1P0CW21 52 aa6.46□□□□□ -1.38
SSBP1-212ENST00000489378 HLA-GP17693 338 aa6.46□□□□□ -1.38
SSBP1-212ENST00000489378 CAMLGP49069 296 aa6.46□□□□□ -1.38
SSBP1-212ENST00000489378 OR2B8PP59922 312 aa6.46□□□□□ -1.38
SSBP1-212ENST00000489378 PAFAH1B2P68402 229 aa6.46□□□□□ -1.38
SSBP1-212ENST00000489378 QRFPP83859 136 aa6.46□□□□□ -1.38
SSBP1-212ENST00000489378 YIF1BQ5BJH7 314 aa6.46□□□□□ -1.38
SSBP1-212ENST00000489378 OR10J5Q8NHC4 309 aa6.46□□□□□ -1.38
SSBP1-212ENST00000489378 ZNF503Q96F45 646 aa6.46□□□□□ -1.38
SSBP1-212ENST00000489378 DERL3Q96Q80 235 aa6.46□□□□□ -1.38
SSBP1-212ENST00000489378 CMSS1Q9BQ75 279 aaKnown RBP6.46□□□□□ -1.38
SSBP1-212ENST00000489378 CABLES2Q9BTV7 478 aa6.46□□□□□ -1.38
SSBP1-212ENST00000489378 OAZ3Q9UMX2 235 aa6.46□□□□□ -1.38
SSBP1-212ENST00000489378 RNF213Q63HN8 5207 aa6.46□□□□□ -1.38
SSBP1-212ENST00000489378 FOXI3A8MTJ6 420 aaPredicted RBP6.45□□□□□ -1.38
SSBP1-212ENST00000489378 TMEM14DPA8MWL7 114 aa6.45□□□□□ -1.38
SSBP1-212ENST00000489378 DNASE2O00115 360 aaPredicted RBP6.45□□□□□ -1.38
SSBP1-212ENST00000489378 CLEC2LP0C7M8 214 aa6.45□□□□□ -1.38
SSBP1-212ENST00000489378 CALB2P22676 271 aa6.45□□□□□ -1.38
SSBP1-212ENST00000489378 TMEM50BP56557 158 aa6.45□□□□□ -1.38
SSBP1-212ENST00000489378 RPL8P62917 257 aaKnown RBP6.45□□□□□ -1.38
SSBP1-212ENST00000489378 KCTD9Q7L273 389 aa6.45□□□□□ -1.38
SSBP1-212ENST00000489378 UBAC2Q8NBM4 344 aa6.45□□□□□ -1.38
SSBP1-212ENST00000489378 VSTM2AQ8TAG5 236 aa6.45□□□□□ -1.38
SSBP1-212ENST00000489378 ST8SIA2Q92186 375 aa6.45□□□□□ -1.38
SSBP1-212ENST00000489378 ARHGAP5-AS1Q96IT6 56 aa6.45□□□□□ -1.38
SSBP1-212ENST00000489378 ATG101Q9BSB4 218 aa6.45□□□□□ -1.38
SSBP1-212ENST00000489378 LPAR5Q9H1C0 372 aa6.45□□□□□ -1.38
SSBP1-212ENST00000489378 BABAM2Q9NXR7 383 aa6.45□□□□□ -1.38
SSBP1-212ENST00000489378 THYN1Q9P016 225 aa6.45□□□□□ -1.38
SSBP1-212ENST00000489378 POMPQ9Y244 141 aa6.45□□□□□ -1.38
SSBP1-212ENST00000489378 IGHV3-66A0A0C4DH42 116 aa6.44□□□□□ -1.38
SSBP1-212ENST00000489378 SAC3D1A6NKF1 404 aa6.44□□□□□ -1.38
SSBP1-212ENST00000489378 J3QRK9 145 aa6.44□□□□□ -1.38
SSBP1-212ENST00000489378 YIF1AO95070 293 aa6.44□□□□□ -1.38
SSBP1-212ENST00000489378 APOHP02749 345 aaPredicted RBP6.44□□□□□ -1.38
SSBP1-212ENST00000489378 CTSGP08311 255 aa6.44□□□□□ -1.38
SSBP1-212ENST00000489378 BRWD1-AS2P59051 145 aa6.44□□□□□ -1.38
SSBP1-212ENST00000489378 RPP30P78346 268 aaKnown RBP6.44□□□□□ -1.38
SSBP1-212ENST00000489378 ZIK1Q3SY52 487 aaPredicted RBP6.44□□□□□ -1.38
SSBP1-212ENST00000489378 ACTL10Q5JWF8 245 aa6.44□□□□□ -1.38
SSBP1-212ENST00000489378 SERTAD4-AS1Q5TG53 156 aa6.44□□□□□ -1.38
SSBP1-212ENST00000489378 UBE2UQ5VVX9 321 aa6.44□□□□□ -1.38
SSBP1-212ENST00000489378 ETFRF1Q6IPR1 90 aa6.44□□□□□ -1.38
SSBP1-212ENST00000489378 OR10W1Q8NGF6 305 aa6.44□□□□□ -1.38
SSBP1-212ENST00000489378 SCARB1Q8WTV0 552 aa6.44□□□□□ -1.38
SSBP1-212ENST00000489378 NRG4Q8WWG1 115 aa6.44□□□□□ -1.38
SSBP1-212ENST00000489378 MAFIPQ8WZ33 124 aa6.44□□□□□ -1.38
SSBP1-212ENST00000489378 DGCR14Q96DF8 476 aaKnown RBP6.44□□□□□ -1.38
SSBP1-212ENST00000489378 OR10C1Q96KK4 312 aa6.44□□□□□ -1.38
SSBP1-212ENST00000489378 C17orf77Q96MU5 243 aa6.44□□□□□ -1.38
SSBP1-212ENST00000489378 KRTAP1-5Q9BYS1 174 aa6.44□□□□□ -1.38
SSBP1-212ENST00000489378 MRPS18AQ9NVS2 196 aaKnown RBP6.44□□□□□ -1.38
SSBP1-212ENST00000489378 C21orf62Q9NYP8 219 aa6.44□□□□□ -1.38
SSBP1-212ENST00000489378 HSF4Q9ULV5 492 aa6.44□□□□□ -1.38
SSBP1-212ENST00000489378 MRPS7Q9Y2R9 242 aaKnown RBP6.44□□□□□ -1.38
SSBP1-212ENST00000489378 TRAV14DV4A0A0A6YYC5 116 aa6.43□□□□□ -1.38
SSBP1-212ENST00000489378 TRAV2A0A0B4J234 112 aa6.43□□□□□ -1.38
SSBP1-212ENST00000489378 PNMA8CA0A1B0GUJ8 204 aa6.43□□□□□ -1.38
SSBP1-212ENST00000489378 DLK1P80370 383 aa6.43□□□□□ -1.38
SSBP1-212ENST00000489378 Q56UQ5 140 aa6.43□□□□□ -1.38
SSBP1-212ENST00000489378 PLAC9Q5JTB6 97 aa6.43□□□□□ -1.38
SSBP1-212ENST00000489378 C1orf100Q5SVJ3 147 aa6.43□□□□□ -1.38
SSBP1-212ENST00000489378 FAM222AQ5U5X8 452 aa6.43□□□□□ -1.38
SSBP1-212ENST00000489378 TMPRSS11AQ6ZMR5 421 aa6.43□□□□□ -1.38
SSBP1-212ENST00000489378 H1FOOQ8IZA3 346 aaPredicted RBP6.43□□□□□ -1.38
SSBP1-212ENST00000489378 FAM89BQ8N5H3 189 aa6.43□□□□□ -1.38
SSBP1-212ENST00000489378 NIPSNAP3BQ9BS92 247 aa6.43□□□□□ -1.38
SSBP1-212ENST00000489378 PECRQ9BY49 303 aa6.43□□□□□ -1.38
SSBP1-212ENST00000489378 FGF20Q9NP95 211 aaPredicted RBP6.43□□□□□ -1.38
SSBP1-212ENST00000489378 XCL2Q9UBD3 114 aa6.43□□□□□ -1.38
SSBP1-212ENST00000489378 DKK2Q9UBU2 259 aa6.43□□□□□ -1.38
SSBP1-212ENST00000489378 RABAC1Q9UI14 185 aa6.43□□□□□ -1.38
SSBP1-212ENST00000489378 PRELID3BQ9Y3B1 194 aa6.43□□□□□ -1.38
SSBP1-212ENST00000489378 TRAV3A0A0B4J244 114 aa6.42□□□□□ -1.38
SSBP1-212ENST00000489378 K7EIM0 57 aa6.42□□□□□ -1.38
SSBP1-212ENST00000489378 ST8SIA3O43173 380 aa6.42□□□□□ -1.38
SSBP1-212ENST00000489378 IGLV2-14P01704 120 aa6.42□□□□□ -1.38
SSBP1-212ENST00000489378 ZNF688P0C7X2 276 aa6.42□□□□□ -1.38
SSBP1-212ENST00000489378 RPL11P62913 178 aaKnown RBP6.42□□□□□ -1.38
SSBP1-212ENST00000489378 GDPD1Q8N9F7 314 aa6.42□□□□□ -1.38
SSBP1-212ENST00000489378 OR4S2Q8NH73 311 aa6.42□□□□□ -1.38
SSBP1-212ENST00000489378 RHOXF1Q8NHV9 184 aa6.42□□□□□ -1.38
SSBP1-212ENST00000489378 GINS4Q9BRT9 223 aa6.42□□□□□ -1.38
SSBP1-212ENST00000489378 VSIRQ9H7M9 311 aa6.42□□□□□ -1.38
SSBP1-212ENST00000489378 AP5S1Q9NUS5 200 aa6.42□□□□□ -1.38
SSBP1-212ENST00000489378 CLEC2DQ9UHP7 191 aa6.42□□□□□ -1.38
SSBP1-212ENST00000489378 RBMX2Q9Y388 322 aaKnown RBP6.42□□□□□ -1.38
SSBP1-212ENST00000489378 LRP1Q07954 4544 aaKnown RBP6.42□□□□□ -1.38
SSBP1-212ENST00000489378 ALPLP05186 524 aa6.42□□□□□ -1.38
SSBP1-212ENST00000489378 FCGR3AP08637 254 aa6.42□□□□□ -1.38
SSBP1-212ENST00000489378 OR13C7P0DN81 318 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms