RNA–Protein interactions for RNA: ENST00000488833.1

ATG9A-222, Transcript of autophagy related 9A, human

TSL 2

Gene ATG9A, Length 487 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATG9A-222	ENST00000488833	OR5B3	Q8NH48	314 aa		13.64	□□□□□ -0.23
ATG9A-222	ENST00000488833	GPX8	Q8TED1	209 aa		13.64	□□□□□ -0.23
ATG9A-222	ENST00000488833	SCARB1	Q8WTV0	552 aa		13.64	□□□□□ -0.23
ATG9A-222	ENST00000488833	TMEM56	Q96MV1	263 aa		13.64	□□□□□ -0.23
ATG9A-222	ENST00000488833	ATP6V0B	Q99437	205 aa		13.64	□□□□□ -0.23
ATG9A-222	ENST00000488833	TSC22D3	Q99576	134 aa		13.64	□□□□□ -0.23
ATG9A-222	ENST00000488833	FKBP11	Q9NYL4	201 aa		13.64	□□□□□ -0.23
ATG9A-222	ENST00000488833	COMMD3	Q9UBI1	195 aa		13.64	□□□□□ -0.23
ATG9A-222	ENST00000488833	UBQLN2	Q9UHD9	624 aa		13.64	□□□□□ -0.23
ATG9A-222	ENST00000488833	BIRC6	Q9NR09	4857 aa		13.63	□□□□□ -0.23
ATG9A-222	ENST00000488833	SMIM31	A0A1B0GVY4	71 aa		13.63	□□□□□ -0.23
ATG9A-222	ENST00000488833	TSPAN4	O14817	238 aa		13.63	□□□□□ -0.23
ATG9A-222	ENST00000488833	ZNF207	O43670	478 aa	Known RBP	13.63	□□□□□ -0.23
ATG9A-222	ENST00000488833	TNFAIP8	O95379	198 aa		13.63	□□□□□ -0.23
ATG9A-222	ENST00000488833	NCS1	P62166	190 aa		13.63	□□□□□ -0.23
ATG9A-222	ENST00000488833	LAMTOR1	Q6IAA8	161 aa		13.63	□□□□□ -0.23
ATG9A-222	ENST00000488833	SNX29P2	Q8IUI4	249 aa		13.63	□□□□□ -0.23
ATG9A-222	ENST00000488833	SCPEP1	Q9HB40	452 aa		13.63	□□□□□ -0.23
ATG9A-222	ENST00000488833	TMEM14B	Q9NUH8	114 aa		13.63	□□□□□ -0.23
ATG9A-222	ENST00000488833	DBX1	A6NMT0	343 aa		13.62	□□□□□ -0.23
ATG9A-222	ENST00000488833		F8W735	103 aa	Predicted RBP	13.62	□□□□□ -0.23
ATG9A-222	ENST00000488833	APOA1	P02647	267 aa		13.62	□□□□□ -0.23
ATG9A-222	ENST00000488833	ADM	P35318	185 aa		13.62	□□□□□ -0.23
ATG9A-222	ENST00000488833	LPCAT3	Q6P1A2	487 aa		13.62	□□□□□ -0.23
ATG9A-222	ENST00000488833	TBC1D26	Q86UD7	250 aa		13.62	□□□□□ -0.23
ATG9A-222	ENST00000488833	RCVRN	P35243	200 aa		13.61	□□□□□ -0.23
ATG9A-222	ENST00000488833	APOC4	P55056	127 aa		13.61	□□□□□ -0.23
ATG9A-222	ENST00000488833	ODF3L2	Q3SX64	289 aa		13.61	□□□□□ -0.23
ATG9A-222	ENST00000488833	OR1P1	Q8NH06	330 aa		13.61	□□□□□ -0.23
ATG9A-222	ENST00000488833	MISP3	Q96FF7	219 aa		13.61	□□□□□ -0.23
ATG9A-222	ENST00000488833	FAM212B	Q9NTI7	297 aa	Predicted RBP	13.61	□□□□□ -0.23
ATG9A-222	ENST00000488833	OR4C46	A6NHA9	309 aa		13.6	□□□□□ -0.23
ATG9A-222	ENST00000488833	VBP1	P61758	197 aa		13.6	□□□□□ -0.23
ATG9A-222	ENST00000488833	H2BFWT	Q7Z2G1	175 aa		13.6	□□□□□ -0.23
ATG9A-222	ENST00000488833	OR4A16	Q8NH70	328 aa		13.6	□□□□□ -0.23
ATG9A-222	ENST00000488833	MRGPRF	Q96AM1	343 aa		13.6	□□□□□ -0.23
ATG9A-222	ENST00000488833	SEC22A	Q96IW7	307 aa		13.6	□□□□□ -0.23
ATG9A-222	ENST00000488833	FUNDC2	Q9BWH2	189 aa		13.6	□□□□□ -0.23
ATG9A-222	ENST00000488833		K7EMT4	169 aa		13.59	□□□□□ -0.23
ATG9A-222	ENST00000488833	IGKV1-39	P01597	117 aa		13.59	□□□□□ -0.23
ATG9A-222	ENST00000488833	IGKV1D-39	P04432	117 aa		13.59	□□□□□ -0.23
ATG9A-222	ENST00000488833	CTSD	P07339	412 aa	Predicted RBP	13.59	□□□□□ -0.23
ATG9A-222	ENST00000488833	ELK1	P19419	428 aa		13.59	□□□□□ -0.23
ATG9A-222	ENST00000488833	REL	Q04864	619 aa	Predicted RBP	13.59	□□□□□ -0.23
ATG9A-222	ENST00000488833	DEFB135	Q30KP9	77 aa		13.59	□□□□□ -0.23
ATG9A-222	ENST00000488833	CMTM3	Q96MX0	182 aa		13.59	□□□□□ -0.23
ATG9A-222	ENST00000488833	C15orf62	A8K5M9	175 aa		13.58	□□□□□ -0.24
ATG9A-222	ENST00000488833		M0QYG6	137 aa		13.58	□□□□□ -0.24
ATG9A-222	ENST00000488833	NUPL2	O15504	423 aa	Known RBP	13.58	□□□□□ -0.24
ATG9A-222	ENST00000488833	HPGDS	O60760	199 aa		13.58	□□□□□ -0.24
ATG9A-222	ENST00000488833	CTSG	P08311	255 aa		13.58	□□□□□ -0.24
ATG9A-222	ENST00000488833	MFAP4	P55083	255 aa		13.58	□□□□□ -0.24
ATG9A-222	ENST00000488833	UCP3	P55916	312 aa		13.58	□□□□□ -0.24
ATG9A-222	ENST00000488833	PRCD	Q00LT1	54 aa		13.58	□□□□□ -0.24
ATG9A-222	ENST00000488833	PMS2P11	Q13670	270 aa		13.58	□□□□□ -0.24
ATG9A-222	ENST00000488833	RNASE12	Q5GAN4	147 aa	Known RBP	13.58	□□□□□ -0.24
ATG9A-222	ENST00000488833		Q6ZWC4	215 aa		13.58	□□□□□ -0.24
ATG9A-222	ENST00000488833	TP53TG1	Q9Y2A0	90 aa		13.58	□□□□□ -0.24
ATG9A-222	ENST00000488833		A0A0J9YWU9	116 aa		13.57	□□□□□ -0.24
ATG9A-222	ENST00000488833	CXorf65	A6NEN9	183 aa		13.57	□□□□□ -0.24
ATG9A-222	ENST00000488833	FAM25A	B3EWG3	89 aa		13.57	□□□□□ -0.24
ATG9A-222	ENST00000488833	FAM25C	B3EWG5	89 aa		13.57	□□□□□ -0.24
ATG9A-222	ENST00000488833	FAM25G	B3EWG6	89 aa		13.57	□□□□□ -0.24
ATG9A-222	ENST00000488833		I3L2K1	104 aa		13.57	□□□□□ -0.24
ATG9A-222	ENST00000488833	SPRY2	O43597	315 aa		13.57	□□□□□ -0.24
ATG9A-222	ENST00000488833	YIF1A	O95070	293 aa		13.57	□□□□□ -0.24
ATG9A-222	ENST00000488833	MT-CO2	P00403	227 aa		13.57	□□□□□ -0.24
ATG9A-222	ENST00000488833	RPL35A	P18077	110 aa	Known RBP	13.57	□□□□□ -0.24
ATG9A-222	ENST00000488833	SMPX	Q9UHP9	88 aa		13.57	□□□□□ -0.24
ATG9A-222	ENST00000488833	IGHV3-49	A0A0A0MS15	119 aa		13.56	□□□□□ -0.24
ATG9A-222	ENST00000488833	KIR2DL5B	A0A0G2JN68	375 aa		13.56	□□□□□ -0.24
ATG9A-222	ENST00000488833	KIR2DL5B	A0A0G2JPC4	375 aa		13.56	□□□□□ -0.24
ATG9A-222	ENST00000488833	IGHV7-4-1	A0A0J9YVY3	117 aa		13.56	□□□□□ -0.24
ATG9A-222	ENST00000488833	UBE2C	O00762	179 aa		13.56	□□□□□ -0.24
ATG9A-222	ENST00000488833	IGHV3-48	P01763	117 aa		13.56	□□□□□ -0.24
ATG9A-222	ENST00000488833	PGAM2	P15259	253 aa		13.56	□□□□□ -0.24
ATG9A-222	ENST00000488833	BMI1	P35226	326 aa		13.56	□□□□□ -0.24
ATG9A-222	ENST00000488833	SPINK9	Q5DT21	86 aa		13.56	□□□□□ -0.24
ATG9A-222	ENST00000488833	LYG2	Q86SG7	212 aa		13.56	□□□□□ -0.24
ATG9A-222	ENST00000488833	WFDC3	Q8IUB2	231 aa		13.56	□□□□□ -0.24
ATG9A-222	ENST00000488833	KIR2DL5A	Q8N109	375 aa		13.56	□□□□□ -0.24
ATG9A-222	ENST00000488833	STPG3	Q8N7X2	389 aa		13.56	□□□□□ -0.24
ATG9A-222	ENST00000488833	ZNF114	Q8NC26	417 aa		13.56	□□□□□ -0.24
ATG9A-222	ENST00000488833	TMEM116	Q8NCL8	245 aa		13.56	□□□□□ -0.24
ATG9A-222	ENST00000488833	KIR2DL5B	Q8NHK3	375 aa		13.56	□□□□□ -0.24
ATG9A-222	ENST00000488833	PINX1	Q96BK5	328 aa	Known RBP	13.56	□□□□□ -0.24
ATG9A-222	ENST00000488833	ZNF414	Q96IQ9	312 aa		13.56	□□□□□ -0.24
ATG9A-222	ENST00000488833	RNF2	Q99496	336 aa		13.56	□□□□□ -0.24
ATG9A-222	ENST00000488833	RHPN1-AS1	Q9BWJ2	59 aa		13.56	□□□□□ -0.24
ATG9A-222	ENST00000488833	GNG7	O60262	68 aa		13.55	□□□□□ -0.24
ATG9A-222	ENST00000488833	FCGR2B	P31994	310 aa	Predicted RBP	13.55	□□□□□ -0.24
ATG9A-222	ENST00000488833	RORC	P51449	518 aa		13.55	□□□□□ -0.24
ATG9A-222	ENST00000488833	HSPE1	P61604	102 aa	Known RBP	13.55	□□□□□ -0.24
ATG9A-222	ENST00000488833	IZUMO4	Q1ZYL8	232 aa		13.55	□□□□□ -0.24
ATG9A-222	ENST00000488833	MZT2A	Q6P582	158 aa		13.55	□□□□□ -0.24
ATG9A-222	ENST00000488833	GALNT14	Q96FL9	552 aa		13.55	□□□□□ -0.24
ATG9A-222	ENST00000488833	TXN2	Q99757	166 aa		13.55	□□□□□ -0.24
ATG9A-222	ENST00000488833	IGKV3-7	A0A075B6H7	116 aa		13.54	□□□□□ -0.24
ATG9A-222	ENST00000488833	CHEK1	O14757	476 aa		13.54	□□□□□ -0.24
ATG9A-222	ENST00000488833	PI3	P19957	117 aa		13.54	□□□□□ -0.24

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