RNA–Protein interactions for RNA: ENST00000486268.5

ERGIC3-215, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 584 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-215ENST00000486268 HINT2Q9BX68 163 aa9.48□□□□□ -0.89
ERGIC3-215ENST00000486268 NPCDR1Q9BY65 106 aa9.48□□□□□ -0.89
ERGIC3-215ENST00000486268 ABCA2Q9BZC7 2435 aa9.48□□□□□ -0.89
ERGIC3-215ENST00000486268 DOCK11Q5JSL3 2073 aa9.47□□□□□ -0.89
ERGIC3-215ENST00000486268 RNASEK-C17orf49H0YIS7 233 aa9.47□□□□□ -0.89
ERGIC3-215ENST00000486268 SNRNP70P08621 437 aaKnown RBP9.47□□□□□ -0.89
ERGIC3-215ENST00000486268 M6PRP20645 277 aa9.47□□□□□ -0.89
ERGIC3-215ENST00000486268 EBI3Q14213 229 aa9.47□□□□□ -0.89
ERGIC3-215ENST00000486268 PPP1R27Q86WC6 154 aa9.47□□□□□ -0.89
ERGIC3-215ENST00000486268 ZNF114Q8NC26 417 aa9.47□□□□□ -0.89
ERGIC3-215ENST00000486268 OR2T10Q8NGZ9 312 aa9.47□□□□□ -0.89
ERGIC3-215ENST00000486268 RNASEH2CQ8TDP1 164 aaKnown RBP9.47□□□□□ -0.89
ERGIC3-215ENST00000486268 TMEM170AQ8WVE7 144 aa9.47□□□□□ -0.89
ERGIC3-215ENST00000486268 MBD3L1Q8WWY6 194 aa9.47□□□□□ -0.89
ERGIC3-215ENST00000486268 TBX15Q96SF7 602 aa9.47□□□□□ -0.89
ERGIC3-215ENST00000486268 RSG1Q9BU20 258 aa9.47□□□□□ -0.89
ERGIC3-215ENST00000486268 KIAA1456Q9P272 454 aa9.47□□□□□ -0.89
ERGIC3-215ENST00000486268 METTL1Q9UBP6 276 aaKnown RBP9.47□□□□□ -0.89
ERGIC3-215ENST00000486268 NF1P21359 2839 aa9.46□□□□□ -0.89
ERGIC3-215ENST00000486268 FLNAP21333 2647 aaKnown RBP9.46□□□□□ -0.89
ERGIC3-215ENST00000486268 MED13LQ71F56 2210 aa9.46□□□□□ -0.89
ERGIC3-215ENST00000486268 IGHV3-72A0A0B4J1Y9 119 aa9.46□□□□□ -0.9
ERGIC3-215ENST00000486268 IGHV4-61A0A0C4DH41 118 aa9.46□□□□□ -0.9
ERGIC3-215ENST00000486268 NDUFA3O95167 84 aa9.46□□□□□ -0.9
ERGIC3-215ENST00000486268 CD5P06127 495 aa9.46□□□□□ -0.9
ERGIC3-215ENST00000486268 RNASE2P10153 161 aaKnown RBP9.46□□□□□ -0.9
ERGIC3-215ENST00000486268 GATA3P23771 443 aa9.46□□□□□ -0.9
ERGIC3-215ENST00000486268 BRS3P32247 399 aa9.46□□□□□ -0.9
ERGIC3-215ENST00000486268 RPL27AP46776 148 aaKnown RBP9.46□□□□□ -0.9
ERGIC3-215ENST00000486268 DLX1P56177 255 aa9.46□□□□□ -0.9
ERGIC3-215ENST00000486268 KLRD1Q13241 179 aa9.46□□□□□ -0.9
ERGIC3-215ENST00000486268 PEA15Q15121 130 aa9.46□□□□□ -0.9
ERGIC3-215ENST00000486268 TEPPQ6URK8 271 aa9.46□□□□□ -0.9
ERGIC3-215ENST00000486268 TREML4Q6UXN2 200 aa9.46□□□□□ -0.9
ERGIC3-215ENST00000486268 SPNS3Q6ZMD2 512 aa9.46□□□□□ -0.9
ERGIC3-215ENST00000486268 CIARTQ8N365 385 aaPredicted RBP9.46□□□□□ -0.9
ERGIC3-215ENST00000486268 C1orf159Q96HA4 380 aa9.46□□□□□ -0.9
ERGIC3-215ENST00000486268 RITA1Q96K30 269 aa9.46□□□□□ -0.9
ERGIC3-215ENST00000486268 LSM4Q9Y4Z0 139 aaKnown RBP9.46□□□□□ -0.9
ERGIC3-215ENST00000486268 HILPDAQ9Y5L2 63 aa9.46□□□□□ -0.9
ERGIC3-215ENST00000486268 HIVEP1P15822 2718 aa9.45□□□□□ -0.9
ERGIC3-215ENST00000486268 TMEM218A2RU14 115 aa9.45□□□□□ -0.9
ERGIC3-215ENST00000486268 FAM157AC9JC47 383 aa9.45□□□□□ -0.9
ERGIC3-215ENST00000486268 NBR2O15453 112 aa9.45□□□□□ -0.9
ERGIC3-215ENST00000486268 CYB5BO43169 146 aa9.45□□□□□ -0.9
ERGIC3-215ENST00000486268 OPRK1P41145 380 aa9.45□□□□□ -0.9
ERGIC3-215ENST00000486268 FHITP49789 147 aa9.45□□□□□ -0.9
ERGIC3-215ENST00000486268 PMS2P11Q13670 270 aa9.45□□□□□ -0.9
ERGIC3-215ENST00000486268 MRGPRG-AS1Q2M3A8 158 aa9.45□□□□□ -0.9
ERGIC3-215ENST00000486268 TUSC1Q2TAM9 212 aa9.45□□□□□ -0.9
ERGIC3-215ENST00000486268 ACOT6Q3I5F7 207 aaPredicted RBP9.45□□□□□ -0.9
ERGIC3-215ENST00000486268 LDLRAD2Q5SZI1 272 aa9.45□□□□□ -0.9
ERGIC3-215ENST00000486268 PVRIGQ6DKI7 326 aa9.45□□□□□ -0.9
ERGIC3-215ENST00000486268 ETFRF1Q6IPR1 90 aa9.45□□□□□ -0.9
ERGIC3-215ENST00000486268 BPIFCQ8NFQ6 507 aa9.45□□□□□ -0.9
ERGIC3-215ENST00000486268 LINC00052Q96N35 136 aa9.45□□□□□ -0.9
ERGIC3-215ENST00000486268 RPRMQ9NS64 109 aa9.45□□□□□ -0.9
ERGIC3-215ENST00000486268 ACANP16112 2415 aa9.45□□□□□ -0.9
ERGIC3-215ENST00000486268 SMCO3A2RU48 225 aa9.44□□□□□ -0.9
ERGIC3-215ENST00000486268 RNF223E7ERA6 249 aa9.44□□□□□ -0.9
ERGIC3-215ENST00000486268 CORTO00230 105 aa9.44□□□□□ -0.9
ERGIC3-215ENST00000486268 IGKV1D-33P01593 117 aa9.44□□□□□ -0.9
ERGIC3-215ENST00000486268 IGKV1-33P01594 117 aa9.44□□□□□ -0.9
ERGIC3-215ENST00000486268 OPN1MWP04001 364 aa9.44□□□□□ -0.9
ERGIC3-215ENST00000486268 FAM106CPP0CH98 169 aa9.44□□□□□ -0.9
ERGIC3-215ENST00000486268 OPN1MW2P0DN77 364 aa9.44□□□□□ -0.9
ERGIC3-215ENST00000486268 OPN1MW3P0DN78 364 aa9.44□□□□□ -0.9
ERGIC3-215ENST00000486268 MYOD1P15172 320 aa9.44□□□□□ -0.9
ERGIC3-215ENST00000486268 TAGLN2P37802 199 aaKnown RBP9.44□□□□□ -0.9
ERGIC3-215ENST00000486268 PRB3Q04118 309 aaPredicted RBP9.44□□□□□ -0.9
ERGIC3-215ENST00000486268 CD69Q07108 199 aa9.44□□□□□ -0.9
ERGIC3-215ENST00000486268 PLGLAQ15195 96 aa9.44□□□□□ -0.9
ERGIC3-215ENST00000486268 MMDQ15546 238 aa9.44□□□□□ -0.9
ERGIC3-215ENST00000486268 SSX2Q16385 188 aa9.44□□□□□ -0.9
ERGIC3-215ENST00000486268 TNXAQ16473 311 aa9.44□□□□□ -0.9
ERGIC3-215ENST00000486268 C10orf91Q5T1B1 145 aa9.44□□□□□ -0.9
ERGIC3-215ENST00000486268 SPSB3Q6PJ21 355 aa9.44□□□□□ -0.9
ERGIC3-215ENST00000486268 TMEM144Q7Z5S9 345 aa9.44□□□□□ -0.9
ERGIC3-215ENST00000486268 LHFPL4Q7Z7J7 247 aa9.44□□□□□ -0.9
ERGIC3-215ENST00000486268 Q8N6K4 173 aa9.44□□□□□ -0.9
ERGIC3-215ENST00000486268 MAPK1IP1LQ8NDC0 245 aa9.44□□□□□ -0.9
ERGIC3-215ENST00000486268 OR1L6Q8NGR2 347 aa9.44□□□□□ -0.9
ERGIC3-215ENST00000486268 SFT2D1Q8WV19 159 aa9.44□□□□□ -0.9
ERGIC3-215ENST00000486268 EAF1Q96JC9 268 aaPredicted RBP9.44□□□□□ -0.9
ERGIC3-215ENST00000486268 SEC11CQ9BY50 192 aa9.44□□□□□ -0.9
ERGIC3-215ENST00000486268 ACTR3CQ9C0K3 210 aaPredicted RBP9.44□□□□□ -0.9
ERGIC3-215ENST00000486268 TREM1Q9NP99 234 aa9.44□□□□□ -0.9
ERGIC3-215ENST00000486268 C1RLQ9NZP8 487 aa9.44□□□□□ -0.9
ERGIC3-215ENST00000486268 TRAV20A0A0B4J274 112 aa9.43□□□□□ -0.9
ERGIC3-215ENST00000486268 CTXND1A0A1B0GTU2 59 aa9.43□□□□□ -0.9
ERGIC3-215ENST00000486268 CGB1A6NKQ9 187 aa9.43□□□□□ -0.9
ERGIC3-215ENST00000486268 B4DSR2 109 aa9.43□□□□□ -0.9
ERGIC3-215ENST00000486268 NPFFO15130 113 aa9.43□□□□□ -0.9
ERGIC3-215ENST00000486268 NDUFS6O75380 124 aaKnown RBP9.43□□□□□ -0.9
ERGIC3-215ENST00000486268 OR13C7P0DN81 318 aa9.43□□□□□ -0.9
ERGIC3-215ENST00000486268 RPL29P47914 159 aaKnown RBP9.43□□□□□ -0.9
ERGIC3-215ENST00000486268 AKR1C1Q04828 323 aa9.43□□□□□ -0.9
ERGIC3-215ENST00000486268 WT1-ASQ06250 92 aa9.43□□□□□ -0.9
ERGIC3-215ENST00000486268 GUK1Q16774 197 aa9.43□□□□□ -0.9
ERGIC3-215ENST00000486268 TMEM249Q2WGJ8 235 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms