RNA–Protein interactions for RNA: ENST00000483764.5

MRPL28-210, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,512 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-210ENST00000483764 MANBALQ9NQG1 85 aa13.85□□□□□ -0.19
MRPL28-210ENST00000483764 SLC39A9Q9NUM3 307 aa13.85□□□□□ -0.19
MRPL28-210ENST00000483764 CCDC168Q8NDH2 2452 aa13.85□□□□□ -0.19
MRPL28-210ENST00000483764 MAP1LC3B2A6NCE7 125 aa13.85□□□□□ -0.19
MRPL28-210ENST00000483764 CEACAM3P40198 252 aa13.85□□□□□ -0.19
MRPL28-210ENST00000483764 LGALS4P56470 323 aa13.85□□□□□ -0.19
MRPL28-210ENST00000483764 OR2B8PP59922 312 aa13.85□□□□□ -0.19
MRPL28-210ENST00000483764 RAB11AP62491 216 aa13.85□□□□□ -0.19
MRPL28-210ENST00000483764 HAGHQ16775 308 aa13.85□□□□□ -0.19
MRPL28-210ENST00000483764 LDLRAD2Q5SZI1 272 aa13.85□□□□□ -0.19
MRPL28-210ENST00000483764 OR8G2PQ6IF36 304 aa13.85□□□□□ -0.19
MRPL28-210ENST00000483764 RPEQ96AT9 228 aa13.85□□□□□ -0.19
MRPL28-210ENST00000483764 RARRES2Q99969 163 aa13.85□□□□□ -0.19
MRPL28-210ENST00000483764 NABP2Q9BQ15 211 aa13.85□□□□□ -0.19
MRPL28-210ENST00000483764 MAP1LC3BQ9GZQ8 125 aa13.85□□□□□ -0.19
MRPL28-210ENST00000483764 CENPVL3A0A0U1RRI6 287 aa13.84□□□□□ -0.19
MRPL28-210ENST00000483764 FNDC10F2Z333 226 aa13.84□□□□□ -0.19
MRPL28-210ENST00000483764 H3BQ15 152 aa13.84□□□□□ -0.19
MRPL28-210ENST00000483764 J3QLI3 93 aa13.84□□□□□ -0.19
MRPL28-210ENST00000483764 CYB5BO43169 146 aa13.84□□□□□ -0.19
MRPL28-210ENST00000483764 CRYBA1P05813 215 aa13.84□□□□□ -0.19
MRPL28-210ENST00000483764 MDKP21741 143 aaPredicted RBP13.84□□□□□ -0.19
MRPL28-210ENST00000483764 HOXA1P49639 335 aaPredicted RBP13.84□□□□□ -0.19
MRPL28-210ENST00000483764 ACOT6Q3I5F7 207 aaPredicted RBP13.84□□□□□ -0.19
MRPL28-210ENST00000483764 TPTE2P1Q5T6R2 138 aa13.84□□□□□ -0.19
MRPL28-210ENST00000483764 MINOS1Q5TGZ0 78 aa13.84□□□□□ -0.19
MRPL28-210ENST00000483764 CYB5R2Q6BCY4 276 aa13.84□□□□□ -0.19
MRPL28-210ENST00000483764 CIARTQ8N365 385 aaPredicted RBP13.84□□□□□ -0.19
MRPL28-210ENST00000483764 TMEM242Q9NWH2 141 aa13.84□□□□□ -0.19
MRPL28-210ENST00000483764 MINOS1-NBL1R4GNA1 71 aa13.84□□□□□ -0.19
MRPL28-210ENST00000483764 WNK2Q9Y3S1 2297 aa13.83□□□□□ -0.2
MRPL28-210ENST00000483764 TGOLN2O43493 480 aa13.83□□□□□ -0.2
MRPL28-210ENST00000483764 IFNA17P01571 189 aa13.83□□□□□ -0.2
MRPL28-210ENST00000483764 FGF7P21781 194 aa13.83□□□□□ -0.2
MRPL28-210ENST00000483764 DLK1P80370 383 aa13.83□□□□□ -0.2
MRPL28-210ENST00000483764 LHFPL4Q7Z7J7 247 aa13.83□□□□□ -0.2
MRPL28-210ENST00000483764 C1QL4Q86Z23 238 aa13.83□□□□□ -0.2
MRPL28-210ENST00000483764 OR5AN1Q8NGI8 311 aa13.83□□□□□ -0.2
MRPL28-210ENST00000483764 HIST1H2BAQ96A08 127 aa13.83□□□□□ -0.2
MRPL28-210ENST00000483764 SLC35D1Q9NTN3 355 aa13.83□□□□□ -0.2
MRPL28-210ENST00000483764 FKBP11Q9NYL4 201 aa13.83□□□□□ -0.2
MRPL28-210ENST00000483764 GNG13Q9P2W3 67 aa13.83□□□□□ -0.2
MRPL28-210ENST00000483764 FOXA2Q9Y261 457 aaPredicted RBP13.83□□□□□ -0.2
MRPL28-210ENST00000483764 WDR83OSQ9Y284 106 aa13.83□□□□□ -0.2
MRPL28-210ENST00000483764 TBL2Q9Y4P3 447 aaKnown RBP13.83□□□□□ -0.2
MRPL28-210ENST00000483764 TMEM250H0YL14 139 aa13.82□□□□□ -0.2
MRPL28-210ENST00000483764 APOA2P02652 100 aa13.82□□□□□ -0.2
MRPL28-210ENST00000483764 RTL8BQ17RB0 113 aa13.82□□□□□ -0.2
MRPL28-210ENST00000483764 TXNDC17Q9BRA2 123 aa13.82□□□□□ -0.2
MRPL28-210ENST00000483764 PRNDQ9UKY0 176 aa13.82□□□□□ -0.2
MRPL28-210ENST00000483764 ZNF257Q9Y2Q1 563 aa13.82□□□□□ -0.2
MRPL28-210ENST00000483764 PUS1Q9Y606 427 aaKnown RBP eCLIP13.82□□□□□ -0.2
MRPL28-210ENST00000483764 IGHV1-69DA0A0B4J2H0 117 aa13.81□□□□□ -0.2
MRPL28-210ENST00000483764 IGHV1-3A0A0C4DH29 117 aa13.81□□□□□ -0.2
MRPL28-210ENST00000483764 SMCO3A2RU48 225 aa13.81□□□□□ -0.2
MRPL28-210ENST00000483764 H0YJW9 148 aa13.81□□□□□ -0.2
MRPL28-210ENST00000483764 SMAD7O15105 426 aaKnown RBP13.81□□□□□ -0.2
MRPL28-210ENST00000483764 NPFFO15130 113 aa13.81□□□□□ -0.2
MRPL28-210ENST00000483764 AVPP01185 164 aa13.81□□□□□ -0.2
MRPL28-210ENST00000483764 IGHV1-69P01742 117 aa13.81□□□□□ -0.2
MRPL28-210ENST00000483764 MC5RP33032 325 aa13.81□□□□□ -0.2
MRPL28-210ENST00000483764 PSMB3P49720 205 aa13.81□□□□□ -0.2
MRPL28-210ENST00000483764 MOB3BQ86TA1 216 aa13.81□□□□□ -0.2
MRPL28-210ENST00000483764 CYB561D1Q8N8Q1 229 aa13.81□□□□□ -0.2
MRPL28-210ENST00000483764 NPCDR1Q9BY65 106 aa13.81□□□□□ -0.2
MRPL28-210ENST00000483764 HILPDAQ9Y5L2 63 aa13.81□□□□□ -0.2
MRPL28-210ENST00000483764 A0A1B0GV50 99 aa13.8□□□□□ -0.2
MRPL28-210ENST00000483764 C15orf61A6NNL5 157 aa13.8□□□□□ -0.2
MRPL28-210ENST00000483764 C15orf62A8K5M9 175 aa13.8□□□□□ -0.2
MRPL28-210ENST00000483764 OOSP1A8MZH6 123 aa13.8□□□□□ -0.2
MRPL28-210ENST00000483764 OR2C1O95371 312 aa13.8□□□□□ -0.2
MRPL28-210ENST00000483764 RAB5AP20339 215 aa13.8□□□□□ -0.2
MRPL28-210ENST00000483764 VDAC2P45880 294 aaPredicted RBP13.8□□□□□ -0.2
MRPL28-210ENST00000483764 RELBQ01201 579 aa13.8□□□□□ -0.2
MRPL28-210ENST00000483764 SSX2Q16385 188 aa13.8□□□□□ -0.2
MRPL28-210ENST00000483764 PIP4P2Q8N4L2 257 aa13.8□□□□□ -0.2
MRPL28-210ENST00000483764 OR10G9Q8NGN4 311 aa13.8□□□□□ -0.2
MRPL28-210ENST00000483764 OR10G7Q8NGN6 311 aa13.8□□□□□ -0.2
MRPL28-210ENST00000483764 QTRT1Q9BXR0 403 aaKnown RBP13.8□□□□□ -0.2
MRPL28-210ENST00000483764 CTDSP1Q9GZU7 261 aa13.8□□□□□ -0.2
MRPL28-210ENST00000483764 ENY2Q9NPA8 101 aa13.8□□□□□ -0.2
MRPL28-210ENST00000483764 TMEM140Q9NV12 185 aa13.8□□□□□ -0.2
MRPL28-210ENST00000483764 RFNGQ9Y644 331 aa13.8□□□□□ -0.2
MRPL28-210ENST00000483764 ITPR3Q14573 2671 aa13.8□□□□□ -0.2
MRPL28-210ENST00000483764 CREBBPQ92793 2442 aa13.8□□□□□ -0.2
MRPL28-210ENST00000483764 CR1P17927 2039 aa13.8□□□□□ -0.2
MRPL28-210ENST00000483764 IGHV3OR16-10A0A075B7F0 116 aa13.8□□□□□ -0.2
MRPL28-210ENST00000483764 TRAV40A0A0B4J280 105 aa13.8□□□□□ -0.2
MRPL28-210ENST00000483764 A0A1W2PPI3 338 aa13.8□□□□□ -0.2
MRPL28-210ENST00000483764 SEC14L6B5MCN3 397 aa13.8□□□□□ -0.2
MRPL28-210ENST00000483764 IGKV1-16P04430 117 aa13.8□□□□□ -0.2
MRPL28-210ENST00000483764 OR9G9P0C7N8 305 aa13.8□□□□□ -0.2
MRPL28-210ENST00000483764 CD1BP29016 333 aa13.8□□□□□ -0.2
MRPL28-210ENST00000483764 SAA4P35542 130 aa13.8□□□□□ -0.2
MRPL28-210ENST00000483764 ZNF726P1Q15940 193 aa13.8□□□□□ -0.2
MRPL28-210ENST00000483764 CCDC144NLQ6NUI1 221 aa13.8□□□□□ -0.2
MRPL28-210ENST00000483764 LCN15Q6UWW0 184 aa13.8□□□□□ -0.2
MRPL28-210ENST00000483764 HEYLQ9NQ87 328 aaPredicted RBP13.8□□□□□ -0.2
MRPL28-210ENST00000483764 WASHC3Q9Y3C0 194 aa13.8□□□□□ -0.2
MRPL28-210ENST00000483764 IFNA10P01566 189 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms