RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 TRAV26-1A0A087WT03 109 aa8.02□□□□□ -1.13
USP11-208ENST00000480104 TRAV3A0A0B4J244 114 aa8.02□□□□□ -1.13
USP11-208ENST00000480104 TRBV5-5A0A0J9YX44 114 aa8.02□□□□□ -1.13
USP11-208ENST00000480104 SIVA1O15304 175 aa8.02□□□□□ -1.13
USP11-208ENST00000480104 PRM2P04554 102 aa8.02□□□□□ -1.13
USP11-208ENST00000480104 BRWD1-AS2P59051 145 aa8.02□□□□□ -1.13
USP11-208ENST00000480104 TAS2R43P59537 309 aa8.02□□□□□ -1.13
USP11-208ENST00000480104 UNC119Q13432 240 aa8.02□□□□□ -1.13
USP11-208ENST00000480104 FCN2Q15485 313 aa8.02□□□□□ -1.13
USP11-208ENST00000480104 GDF5OSQ5U4N7 250 aa8.02□□□□□ -1.13
USP11-208ENST00000480104 CDH26Q8IXH8 852 aa8.02□□□□□ -1.13
USP11-208ENST00000480104 RXFP4Q8TDU9 374 aa8.02□□□□□ -1.13
USP11-208ENST00000480104 NRBF2Q96F24 287 aa8.02□□□□□ -1.13
USP11-208ENST00000480104 COMMD5Q9GZQ3 224 aa8.02□□□□□ -1.13
USP11-208ENST00000480104 BET1LQ9NYM9 111 aa8.02□□□□□ -1.13
USP11-208ENST00000480104 A0A0J9YY99 117 aa8.01□□□□□ -1.13
USP11-208ENST00000480104 A0A1W2PPK0 400 aa8.01□□□□□ -1.13
USP11-208ENST00000480104 J3QRK9 145 aa8.01□□□□□ -1.13
USP11-208ENST00000480104 SOCS1O15524 211 aa8.01□□□□□ -1.13
USP11-208ENST00000480104 IGHV3-48P01763 117 aa8.01□□□□□ -1.13
USP11-208ENST00000480104 DEFB1P60022 68 aa8.01□□□□□ -1.13
USP11-208ENST00000480104 SCXQ7RTU7 201 aa8.01□□□□□ -1.13
USP11-208ENST00000480104 TCTEX1D2Q8WW35 142 aa8.01□□□□□ -1.13
USP11-208ENST00000480104 MYCBPQ99417 103 aaPredicted RBP8.01□□□□□ -1.13
USP11-208ENST00000480104 UQCC2Q9BRT2 126 aa8.01□□□□□ -1.13
USP11-208ENST00000480104 SLC35B3Q9H1N7 401 aa8.01□□□□□ -1.13
USP11-208ENST00000480104 ERVK13-1Q9NX77 482 aa8.01□□□□□ -1.13
USP11-208ENST00000480104 A0A1W2PS18 150 aa8□□□□□ -1.13
USP11-208ENST00000480104 CBY3A6NI87 242 aa8□□□□□ -1.13
USP11-208ENST00000480104 HMGB1P1B2RPK0 211 aaPredicted RBP8□□□□□ -1.13
USP11-208ENST00000480104 FAM90A26D6RGX4 464 aa8□□□□□ -1.13
USP11-208ENST00000480104 NPIPB6E9PJ23 425 aa8□□□□□ -1.13
USP11-208ENST00000480104 HRASP01112 189 aa8□□□□□ -1.13
USP11-208ENST00000480104 MFAP4P55083 255 aa8□□□□□ -1.13
USP11-208ENST00000480104 SNRPD3P62318 126 aaKnown RBP8□□□□□ -1.13
USP11-208ENST00000480104 KCTD21Q4G0X4 260 aa8□□□□□ -1.13
USP11-208ENST00000480104 RBM48Q5RL73 367 aaKnown RBP8□□□□□ -1.13
USP11-208ENST00000480104 RPL22L1Q6P5R6 122 aaKnown RBP8□□□□□ -1.13
USP11-208ENST00000480104 GLMPQ8WWB7 406 aa8□□□□□ -1.13
USP11-208ENST00000480104 SLC25A46Q96AG3 418 aa8□□□□□ -1.13
USP11-208ENST00000480104 GPHA2Q96T91 129 aa8□□□□□ -1.13
USP11-208ENST00000480104 CMSS1Q9BQ75 279 aaKnown RBP8□□□□□ -1.13
USP11-208ENST00000480104 GINS4Q9BRT9 223 aa8□□□□□ -1.13
USP11-208ENST00000480104 A0A1B0GU03 582 aa7.99□□□□□ -1.13
USP11-208ENST00000480104 GNG7O60262 68 aa7.99□□□□□ -1.13
USP11-208ENST00000480104 UBBP0CG47 229 aa7.99□□□□□ -1.13
USP11-208ENST00000480104 CD36P16671 472 aa7.99□□□□□ -1.13
USP11-208ENST00000480104 M6PRP20645 277 aa7.99□□□□□ -1.13
USP11-208ENST00000480104 NPPCP23582 126 aa7.99□□□□□ -1.13
USP11-208ENST00000480104 OR5I1Q13606 314 aa7.99□□□□□ -1.13
USP11-208ENST00000480104 Q499Y3 187 aa7.99□□□□□ -1.13
USP11-208ENST00000480104 KDM4DQ6B0I6 523 aa7.99□□□□□ -1.13
USP11-208ENST00000480104 H1FOOQ8IZA3 346 aaPredicted RBP7.99□□□□□ -1.13
USP11-208ENST00000480104 CCDC124Q96CT7 223 aaKnown RBP7.99□□□□□ -1.13
USP11-208ENST00000480104 RBMX2Q9Y388 322 aaKnown RBP7.99□□□□□ -1.13
USP11-208ENST00000480104 ZNF705GA8MUZ8 300 aaPredicted RBP7.98□□□□□ -1.13
USP11-208ENST00000480104 I3L2K1 104 aa7.98□□□□□ -1.13
USP11-208ENST00000480104 UPK2O00526 184 aa7.98□□□□□ -1.13
USP11-208ENST00000480104 ATP8B1O43520 1251 aa7.98□□□□□ -1.13
USP11-208ENST00000480104 DIRAS3O95661 229 aa7.98□□□□□ -1.13
USP11-208ENST00000480104 TRAPPC2P0DI81 140 aa7.98□□□□□ -1.13
USP11-208ENST00000480104 TRAPPC2BP0DI82 140 aa7.98□□□□□ -1.13
USP11-208ENST00000480104 HOXA1P49639 335 aaPredicted RBP7.98□□□□□ -1.13
USP11-208ENST00000480104 RPS11P62280 158 aaKnown RBP eCLIP7.98□□□□□ -1.13
USP11-208ENST00000480104 CCDC58Q4VC31 144 aa7.98□□□□□ -1.13
USP11-208ENST00000480104 TTC23Q5W5X9 447 aa7.98□□□□□ -1.13
USP11-208ENST00000480104 THOC7Q6I9Y2 204 aaKnown RBP7.98□□□□□ -1.13
USP11-208ENST00000480104 HSD17B13Q7Z5P4 300 aaPredicted RBP7.98□□□□□ -1.13
USP11-208ENST00000480104 NKAIN3Q8N8D7 197 aa7.98□□□□□ -1.13
USP11-208ENST00000480104 MAFIPQ8WZ33 124 aa7.98□□□□□ -1.13
USP11-208ENST00000480104 TXN2Q99757 166 aa7.98□□□□□ -1.13
USP11-208ENST00000480104 SLC29A1Q99808 456 aa7.98□□□□□ -1.13
USP11-208ENST00000480104 CIB1Q99828 191 aa7.98□□□□□ -1.13
USP11-208ENST00000480104 TMEM208Q9BTX3 173 aa7.98□□□□□ -1.13
USP11-208ENST00000480104 SPATA2Q9UM82 520 aa7.98□□□□□ -1.13
USP11-208ENST00000480104 PLAC8L1A1L4L8 177 aa7.97□□□□□ -1.13
USP11-208ENST00000480104 LRCOL1A6NCL2 159 aa7.97□□□□□ -1.13
USP11-208ENST00000480104 EBAG9O00559 213 aa7.97□□□□□ -1.13
USP11-208ENST00000480104 FKBP6O75344 327 aa7.97□□□□□ -1.13
USP11-208ENST00000480104 NXPH4O95158 308 aa7.97□□□□□ -1.13
USP11-208ENST00000480104 IGLV2-14P01704 120 aa7.97□□□□□ -1.13
USP11-208ENST00000480104 RASSF2P50749 326 aa7.97□□□□□ -1.13
USP11-208ENST00000480104 ODF1Q14990 250 aa7.97□□□□□ -1.13
USP11-208ENST00000480104 ACSM3Q53FZ2 586 aa7.97□□□□□ -1.13
USP11-208ENST00000480104 ZNF600Q6ZNG1 722 aa7.97□□□□□ -1.13
USP11-208ENST00000480104 MOB3AQ96BX8 217 aa7.97□□□□□ -1.13
USP11-208ENST00000480104 SMIM19Q96E16 107 aa7.97□□□□□ -1.13
USP11-208ENST00000480104 MISP3Q96FF7 219 aa7.97□□□□□ -1.13
USP11-208ENST00000480104 ARHGAP5-AS1Q96IT6 56 aa7.97□□□□□ -1.13
USP11-208ENST00000480104 METTL26Q96S19 204 aa7.97□□□□□ -1.13
USP11-208ENST00000480104 HINT2Q9BX68 163 aa7.97□□□□□ -1.13
USP11-208ENST00000480104 LPAR5Q9H1C0 372 aa7.97□□□□□ -1.13
USP11-208ENST00000480104 DBX1A6NMT0 343 aa7.96□□□□□ -1.14
USP11-208ENST00000480104 FOXI3A8MTJ6 420 aaPredicted RBP7.96□□□□□ -1.14
USP11-208ENST00000480104 M0QYG6 137 aa7.96□□□□□ -1.14
USP11-208ENST00000480104 CRYBB3P26998 211 aa7.96□□□□□ -1.14
USP11-208ENST00000480104 DCKP27707 260 aa7.96□□□□□ -1.14
USP11-208ENST00000480104 NKX2-1P43699 371 aaPredicted RBP7.96□□□□□ -1.14
USP11-208ENST00000480104 PPP5CP53041 499 aa7.96□□□□□ -1.14
USP11-208ENST00000480104 QRFPP83859 136 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms