RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 OR1P1Q8NH06 330 aa7.78□□□□□ -1.16
CCM2-208ENST00000476594 MCFD2Q8NI22 146 aa7.78□□□□□ -1.16
CCM2-208ENST00000476594 ZNF502Q8TBZ5 544 aa7.78□□□□□ -1.16
CCM2-208ENST00000476594 MRGPRFQ96AM1 343 aa7.78□□□□□ -1.16
CCM2-208ENST00000476594 CCDC140Q96MF4 163 aa7.78□□□□□ -1.16
CCM2-208ENST00000476594 MIXL1Q9H2W2 232 aa7.78□□□□□ -1.16
CCM2-208ENST00000476594 TUBA4BQ9H853 241 aa7.78□□□□□ -1.16
CCM2-208ENST00000476594 PLEKHA3Q9HB20 300 aa7.78□□□□□ -1.16
CCM2-208ENST00000476594 ENY2Q9NPA8 101 aa7.78□□□□□ -1.16
CCM2-208ENST00000476594 CACFD1Q9UGQ2 172 aa7.78□□□□□ -1.16
CCM2-208ENST00000476594 NSG2Q9Y328 171 aa7.78□□□□□ -1.16
CCM2-208ENST00000476594 FABP12A6NFH5 140 aa7.77□□□□□ -1.17
CCM2-208ENST00000476594 MFSD2BA6NFX1 497 aa7.77□□□□□ -1.17
CCM2-208ENST00000476594 C2orf70A6NJV1 201 aa7.77□□□□□ -1.17
CCM2-208ENST00000476594 CGB1A6NKQ9 187 aa7.77□□□□□ -1.17
CCM2-208ENST00000476594 A8MZ25 164 aa7.77□□□□□ -1.17
CCM2-208ENST00000476594 TGOLN2O43493 480 aa7.77□□□□□ -1.17
CCM2-208ENST00000476594 FRMD6-AS1P0C7T7 363 aa7.77□□□□□ -1.17
CCM2-208ENST00000476594 FOLR2P14207 255 aa7.77□□□□□ -1.17
CCM2-208ENST00000476594 SNCAP37840 140 aa7.77□□□□□ -1.17
CCM2-208ENST00000476594 SUB1P53999 127 aaKnown RBP eCLIP7.77□□□□□ -1.17
CCM2-208ENST00000476594 ELLP55199 621 aaPredicted RBP7.77□□□□□ -1.17
CCM2-208ENST00000476594 HSPE1P61604 102 aaKnown RBP7.77□□□□□ -1.17
CCM2-208ENST00000476594 PRCDQ00LT1 54 aa7.77□□□□□ -1.17
CCM2-208ENST00000476594 DHODHQ02127 395 aa7.77□□□□□ -1.17
CCM2-208ENST00000476594 RELQ04864 619 aaPredicted RBP7.77□□□□□ -1.17
CCM2-208ENST00000476594 WT1-ASQ06250 92 aa7.77□□□□□ -1.17
CCM2-208ENST00000476594 ANKRD55Q3KP44 614 aa7.77□□□□□ -1.17
CCM2-208ENST00000476594 C11orf87Q6NUJ2 197 aa7.77□□□□□ -1.17
CCM2-208ENST00000476594 IL34Q6ZMJ4 242 aa7.77□□□□□ -1.17
CCM2-208ENST00000476594 C19orf35Q6ZS72 473 aa7.77□□□□□ -1.17
CCM2-208ENST00000476594 SLC16A13Q7RTY0 426 aa7.77□□□□□ -1.17
CCM2-208ENST00000476594 HAPLN4Q86UW8 402 aa7.77□□□□□ -1.17
CCM2-208ENST00000476594 OR13C8Q8NGS7 320 aa7.77□□□□□ -1.17
CCM2-208ENST00000476594 MARCH1Q8TCQ1 289 aa7.77□□□□□ -1.17
CCM2-208ENST00000476594 C21orf62Q9NYP8 219 aa7.77□□□□□ -1.17
CCM2-208ENST00000476594 KCNIP3Q9Y2W7 256 aa7.77□□□□□ -1.17
CCM2-208ENST00000476594 CORTO00230 105 aa7.76□□□□□ -1.17
CCM2-208ENST00000476594 GSTZ1O43708 216 aaPredicted RBP7.76□□□□□ -1.17
CCM2-208ENST00000476594 IFNA17P01571 189 aa7.76□□□□□ -1.17
CCM2-208ENST00000476594 HLA-AP01891 365 aaKnown RBP7.76□□□□□ -1.17
CCM2-208ENST00000476594 IGHV4-30-4P0DP06 118 aa7.76□□□□□ -1.17
CCM2-208ENST00000476594 PI3P19957 117 aa7.76□□□□□ -1.17
CCM2-208ENST00000476594 GUCA2BQ16661 112 aa7.76□□□□□ -1.17
CCM2-208ENST00000476594 Q56UQ5 140 aa7.76□□□□□ -1.17
CCM2-208ENST00000476594 ZNF57Q68EA5 555 aaPredicted RBP7.76□□□□□ -1.17
CCM2-208ENST00000476594 UBAC2Q8NBM4 344 aa7.76□□□□□ -1.17
CCM2-208ENST00000476594 ZNF114Q8NC26 417 aa7.76□□□□□ -1.17
CCM2-208ENST00000476594 DEDD2Q8WXF8 326 aa7.76□□□□□ -1.17
CCM2-208ENST00000476594 ASCL2Q99929 193 aa7.76□□□□□ -1.17
CCM2-208ENST00000476594 SLIRPQ9GZT3 109 aaKnown RBP7.76□□□□□ -1.17
CCM2-208ENST00000476594 MRPL27Q9P0M9 148 aaKnown RBP7.76□□□□□ -1.17
CCM2-208ENST00000476594 S4R3C0 116 aa7.76□□□□□ -1.17
CCM2-208ENST00000476594 TRAV25A0A0B4J276 109 aa7.75□□□□□ -1.17
CCM2-208ENST00000476594 ANKRD20A5PA0PJZ0 165 aa7.75□□□□□ -1.17
CCM2-208ENST00000476594 OR2T8A6NH00 312 aa7.75□□□□□ -1.17
CCM2-208ENST00000476594 NDUFA4O00483 81 aa7.75□□□□□ -1.17
CCM2-208ENST00000476594 NUPL2O15504 423 aaKnown RBP7.75□□□□□ -1.17
CCM2-208ENST00000476594 ANXA3P12429 323 aa7.75□□□□□ -1.17
CCM2-208ENST00000476594 CBLN1P23435 193 aa7.75□□□□□ -1.17
CCM2-208ENST00000476594 UCP1P25874 307 aa7.75□□□□□ -1.17
CCM2-208ENST00000476594 BMI1P35226 326 aa7.75□□□□□ -1.17
CCM2-208ENST00000476594 HOXA1P49639 335 aaPredicted RBP7.75□□□□□ -1.17
CCM2-208ENST00000476594 MFAP4P55083 255 aa7.75□□□□□ -1.17
CCM2-208ENST00000476594 CD81P60033 236 aa7.75□□□□□ -1.17
CCM2-208ENST00000476594 CD300EQ496F6 205 aaPredicted RBP7.75□□□□□ -1.17
CCM2-208ENST00000476594 LAMTOR1Q6IAA8 161 aa7.75□□□□□ -1.17
CCM2-208ENST00000476594 RBPMS2Q6ZRY4 209 aaKnown RBP7.75□□□□□ -1.17
CCM2-208ENST00000476594 OR2C3Q8N628 320 aa7.75□□□□□ -1.17
CCM2-208ENST00000476594 OR4D10Q8NGI6 311 aa7.75□□□□□ -1.17
CCM2-208ENST00000476594 OR4C16Q8NGL9 310 aa7.75□□□□□ -1.17
CCM2-208ENST00000476594 RBPMSQ93062 196 aaKnown RBP7.75□□□□□ -1.17
CCM2-208ENST00000476594 MISP3Q96FF7 219 aa7.75□□□□□ -1.17
CCM2-208ENST00000476594 TP53RKQ96S44 253 aa7.75□□□□□ -1.17
CCM2-208ENST00000476594 TXN2Q99757 166 aa7.75□□□□□ -1.17
CCM2-208ENST00000476594 TMEM222Q9H0R3 208 aa7.75□□□□□ -1.17
CCM2-208ENST00000476594 NAA60Q9H7X0 242 aa7.75□□□□□ -1.17
CCM2-208ENST00000476594 DAZ1Q9NQZ3 744 aaKnown RBP7.75□□□□□ -1.17
CCM2-208ENST00000476594 MCUBQ9NWR8 336 aa7.75□□□□□ -1.17
CCM2-208ENST00000476594 DMRT1Q9Y5R6 373 aa7.75□□□□□ -1.17
CCM2-208ENST00000476594 ZNF701M0R085 212 aaPredicted RBP7.74□□□□□ -1.17
CCM2-208ENST00000476594 GNG7O60262 68 aa7.74□□□□□ -1.17
CCM2-208ENST00000476594 IGKV1-39P01597 117 aa7.74□□□□□ -1.17
CCM2-208ENST00000476594 IGKV1D-39P04432 117 aa7.74□□□□□ -1.17
CCM2-208ENST00000476594 TNFSF8P32971 234 aa7.74□□□□□ -1.17
CCM2-208ENST00000476594 NPBWR1P48145 328 aa7.74□□□□□ -1.17
CCM2-208ENST00000476594 SRPXP78539 464 aa7.74□□□□□ -1.17
CCM2-208ENST00000476594 DEFB114Q30KQ6 69 aa7.74□□□□□ -1.17
CCM2-208ENST00000476594 PYDC2Q56P42 97 aa7.74□□□□□ -1.17
CCM2-208ENST00000476594 UXS1Q8NBZ7 420 aa7.74□□□□□ -1.17
CCM2-208ENST00000476594 OR51S1Q8NGJ8 323 aa7.74□□□□□ -1.17
CCM2-208ENST00000476594 SCARB1Q8WTV0 552 aa7.74□□□□□ -1.17
CCM2-208ENST00000476594 TMEM190Q8WZ59 177 aa7.74□□□□□ -1.17
CCM2-208ENST00000476594 RCHY1Q96PM5 261 aa7.74□□□□□ -1.17
CCM2-208ENST00000476594 NEURL2Q9BR09 285 aa7.74□□□□□ -1.17
CCM2-208ENST00000476594 SPATA25Q9BR10 227 aa7.74□□□□□ -1.17
CCM2-208ENST00000476594 ZNF436Q9C0F3 470 aaPredicted RBP7.74□□□□□ -1.17
CCM2-208ENST00000476594 NXF2Q9GZY0 626 aaKnown RBP7.74□□□□□ -1.17
CCM2-208ENST00000476594 ZC4H2Q9NQZ6 224 aa7.74□□□□□ -1.17
CCM2-208ENST00000476594 DNAH9Q9NYC9 4486 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms