RNA–Protein interactions for RNA: ENST00000475470.1

RPUSD3-215, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,413 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-215ENST00000475470 KLF2Q9Y5W3 355 aaPredicted RBP12.39□□□□□ -0.43
RPUSD3-215ENST00000475470 DCHS2Q6V1P9 2916 aa12.39□□□□□ -0.43
RPUSD3-215ENST00000475470 A6NNC1 897 aa12.39□□□□□ -0.43
RPUSD3-215ENST00000475470 MEF2BQ02080 365 aaPredicted RBP12.39□□□□□ -0.43
RPUSD3-215ENST00000475470 SLC35E3Q7Z769 313 aa12.39□□□□□ -0.43
RPUSD3-215ENST00000475470 MANBALQ9NQG1 85 aa12.39□□□□□ -0.43
RPUSD3-215ENST00000475470 M0R1W7 72 aa12.38□□□□□ -0.43
RPUSD3-215ENST00000475470 IGFBP2P18065 325 aa12.38□□□□□ -0.43
RPUSD3-215ENST00000475470 TAGLN2P37802 199 aaKnown RBP12.38□□□□□ -0.43
RPUSD3-215ENST00000475470 EFNA4P52798 201 aa12.38□□□□□ -0.43
RPUSD3-215ENST00000475470 STPG3Q8N7X2 389 aa12.38□□□□□ -0.43
RPUSD3-215ENST00000475470 FAM122AQ96E09 287 aa12.38□□□□□ -0.43
RPUSD3-215ENST00000475470 CGB1A6NKQ9 187 aa12.38□□□□□ -0.43
RPUSD3-215ENST00000475470 COLCA2A8K830 154 aa12.38□□□□□ -0.43
RPUSD3-215ENST00000475470 LY6LH3BQJ8 138 aa12.38□□□□□ -0.43
RPUSD3-215ENST00000475470 ACTL6BO94805 426 aa12.38□□□□□ -0.43
RPUSD3-215ENST00000475470 RPL29P47914 159 aaKnown RBP12.38□□□□□ -0.43
RPUSD3-215ENST00000475470 WT1-ASQ06250 92 aa12.38□□□□□ -0.43
RPUSD3-215ENST00000475470 FAM90A2PQ658T7 463 aa12.38□□□□□ -0.43
RPUSD3-215ENST00000475470 TMEM144Q7Z5S9 345 aa12.38□□□□□ -0.43
RPUSD3-215ENST00000475470 TVP23CQ96ET8 276 aa12.38□□□□□ -0.43
RPUSD3-215ENST00000475470 BIN3Q9NQY0 253 aa12.38□□□□□ -0.43
RPUSD3-215ENST00000475470 HTR1DP28221 377 aa12.37□□□□□ -0.43
RPUSD3-215ENST00000475470 SUB1P53999 127 aaKnown RBP eCLIP12.37□□□□□ -0.43
RPUSD3-215ENST00000475470 MMD2Q8IY49 270 aa12.37□□□□□ -0.43
RPUSD3-215ENST00000475470 GATAD1Q8WUU5 269 aa12.37□□□□□ -0.43
RPUSD3-215ENST00000475470 CNTFRP26992 372 aa12.37□□□□□ -0.43
RPUSD3-215ENST00000475470 CD81P60033 236 aa12.37□□□□□ -0.43
RPUSD3-215ENST00000475470 CD69Q07108 199 aa12.37□□□□□ -0.43
RPUSD3-215ENST00000475470 GAMTQ14353 236 aa12.37□□□□□ -0.43
RPUSD3-215ENST00000475470 PSG5Q15238 335 aa12.37□□□□□ -0.43
RPUSD3-215ENST00000475470 PRSS8Q16651 343 aa12.37□□□□□ -0.43
RPUSD3-215ENST00000475470 MLANAQ16655 118 aa12.37□□□□□ -0.43
RPUSD3-215ENST00000475470 C15orf54Q8N8G6 183 aa12.37□□□□□ -0.43
RPUSD3-215ENST00000475470 OR11H6Q8NGC7 330 aa12.37□□□□□ -0.43
RPUSD3-215ENST00000475470 ZNF98A6NK75 572 aa12.36□□□□□ -0.43
RPUSD3-215ENST00000475470 PRTN3P24158 256 aa12.36□□□□□ -0.43
RPUSD3-215ENST00000475470 TNXAQ16473 311 aa12.36□□□□□ -0.43
RPUSD3-215ENST00000475470 MRGPRG-AS1Q2M3A8 158 aa12.36□□□□□ -0.43
RPUSD3-215ENST00000475470 TPTE2P1Q5T6R2 138 aa12.36□□□□□ -0.43
RPUSD3-215ENST00000475470 TUBA4BQ9H853 241 aa12.36□□□□□ -0.43
RPUSD3-215ENST00000475470 PAGE4O60829 102 aa12.36□□□□□ -0.43
RPUSD3-215ENST00000475470 CACNG8Q8WXS5 425 aa12.36□□□□□ -0.43
RPUSD3-215ENST00000475470 C12orf57Q99622 126 aa12.36□□□□□ -0.43
RPUSD3-215ENST00000475470 DPM3Q9P2X0 92 aa12.36□□□□□ -0.43
RPUSD3-215ENST00000475470 SIGLEC9Q9Y336 463 aa12.36□□□□□ -0.43
RPUSD3-215ENST00000475470 ARHGAP32A7KAX9 2087 aa12.35□□□□□ -0.43
RPUSD3-215ENST00000475470 A0A1W2PPI3 338 aa12.35□□□□□ -0.43
RPUSD3-215ENST00000475470 CRYGBP07316 175 aa12.35□□□□□ -0.43
RPUSD3-215ENST00000475470 GPX4P36969 197 aaPredicted RBP12.35□□□□□ -0.43
RPUSD3-215ENST00000475470 CEACAM3P40198 252 aa12.35□□□□□ -0.43
RPUSD3-215ENST00000475470 PRR20EP86478 221 aa12.35□□□□□ -0.43
RPUSD3-215ENST00000475470 PRR20CP86479 221 aa12.35□□□□□ -0.43
RPUSD3-215ENST00000475470 PRR20DP86480 221 aa12.35□□□□□ -0.43
RPUSD3-215ENST00000475470 PRR20BP86481 221 aa12.35□□□□□ -0.43
RPUSD3-215ENST00000475470 PRR20AP86496 221 aa12.35□□□□□ -0.43
RPUSD3-215ENST00000475470 KLRD1Q13241 179 aa12.35□□□□□ -0.43
RPUSD3-215ENST00000475470 TMEM249Q2WGJ8 235 aa12.35□□□□□ -0.43
RPUSD3-215ENST00000475470 SLC16A13Q7RTY0 426 aa12.35□□□□□ -0.43
RPUSD3-215ENST00000475470 MRPL41Q8IXM3 137 aaKnown RBP12.35□□□□□ -0.43
RPUSD3-215ENST00000475470 OR4F5Q8NH21 305 aa12.35□□□□□ -0.43
RPUSD3-215ENST00000475470 ISOC2Q96AB3 205 aa12.35□□□□□ -0.43
RPUSD3-215ENST00000475470 SLC35E1Q96K37 410 aa12.35□□□□□ -0.43
RPUSD3-215ENST00000475470 OR4F4Q96R69 305 aa12.35□□□□□ -0.43
RPUSD3-215ENST00000475470 METTL1Q9UBP6 276 aaKnown RBP12.35□□□□□ -0.43
RPUSD3-215ENST00000475470 PAX6P26367 422 aa12.35□□□□□ -0.43
RPUSD3-215ENST00000475470 RPL27AP46776 148 aaKnown RBP12.35□□□□□ -0.43
RPUSD3-215ENST00000475470 RHOBP62745 196 aa12.35□□□□□ -0.43
RPUSD3-215ENST00000475470 RNASEH2CQ8TDP1 164 aaKnown RBP12.35□□□□□ -0.43
RPUSD3-215ENST00000475470 ABHD5Q8WTS1 349 aa12.35□□□□□ -0.43
RPUSD3-215ENST00000475470 SLC45A2Q9UMX9 530 aa12.35□□□□□ -0.43
RPUSD3-215ENST00000475470 HILPDAQ9Y5L2 63 aa12.35□□□□□ -0.43
RPUSD3-215ENST00000475470 IGKV1OR2-108A0A075B7D4 117 aa12.34□□□□□ -0.43
RPUSD3-215ENST00000475470 ZNF727A8MUV8 499 aa12.34□□□□□ -0.43
RPUSD3-215ENST00000475470 TIMM23O14925 209 aa12.34□□□□□ -0.43
RPUSD3-215ENST00000475470 CXorf1O96002 111 aa12.34□□□□□ -0.43
RPUSD3-215ENST00000475470 REG1AP05451 166 aa12.34□□□□□ -0.43
RPUSD3-215ENST00000475470 STAG3L2P0CL84 134 aa12.34□□□□□ -0.43
RPUSD3-215ENST00000475470 STAG3L3P0CL85 134 aa12.34□□□□□ -0.43
RPUSD3-215ENST00000475470 OR10J1P30954 320 aa12.34□□□□□ -0.43
RPUSD3-215ENST00000475470 MAS1LP35410 378 aa12.34□□□□□ -0.43
RPUSD3-215ENST00000475470 GNB1P62873 340 aa12.34□□□□□ -0.43
RPUSD3-215ENST00000475470 HABP2Q14520 560 aaPredicted RBP12.34□□□□□ -0.43
RPUSD3-215ENST00000475470 LDLRAD2Q5SZI1 272 aa12.34□□□□□ -0.43
RPUSD3-215ENST00000475470 PPP1R27Q86WC6 154 aa12.34□□□□□ -0.43
RPUSD3-215ENST00000475470 RNF5Q99942 180 aa12.34□□□□□ -0.43
RPUSD3-215ENST00000475470 TMEM250H0YL14 139 aa12.33□□□□□ -0.43
RPUSD3-215ENST00000475470 LINC00869P0C866 280 aa12.33□□□□□ -0.43
RPUSD3-215ENST00000475470 ARL14EPLP0DKL9 152 aa12.33□□□□□ -0.43
RPUSD3-215ENST00000475470 ZFP36P26651 326 aaKnown RBP12.33□□□□□ -0.43
RPUSD3-215ENST00000475470 C1orf122Q6ZSJ8 110 aa12.33□□□□□ -0.43
RPUSD3-215ENST00000475470 OR2T6Q8NHC8 308 aa12.33□□□□□ -0.43
RPUSD3-215ENST00000475470 HIST1H2BAQ96A08 127 aa12.33□□□□□ -0.43
RPUSD3-215ENST00000475470 ACY3Q96HD9 319 aa12.33□□□□□ -0.43
RPUSD3-215ENST00000475470 A0A1W2PRD5 423 aa12.33□□□□□ -0.44
RPUSD3-215ENST00000475470 A0A1W2PRF3 423 aa12.33□□□□□ -0.44
RPUSD3-215ENST00000475470 A0A1W2PRM7 423 aa12.33□□□□□ -0.44
RPUSD3-215ENST00000475470 OR2C1O95371 312 aa12.33□□□□□ -0.44
RPUSD3-215ENST00000475470 IGHV2-5P01817 119 aa12.33□□□□□ -0.44
RPUSD3-215ENST00000475470 PNRC1Q12796 327 aaPredicted RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms