RNA–Protein interactions for RNA: ENST00000472806.1

CCDC171-205, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-205ENST00000472806 DCAF16Q9NXF7 216 aa6.21□□□□□ -1.42
CCDC171-205ENST00000472806 MIOXQ9UGB7 285 aa6.21□□□□□ -1.42
CCDC171-205ENST00000472806 SLC45A2Q9UMX9 530 aa6.21□□□□□ -1.42
CCDC171-205ENST00000472806 WDFY3Q8IZQ1 3526 aa6.21□□□□□ -1.42
CCDC171-205ENST00000472806 RAI1Q7Z5J4 1906 aaPredicted RBP6.21□□□□□ -1.42
CCDC171-205ENST00000472806 EP300Q09472 2414 aaPredicted RBP6.2□□□□□ -1.42
CCDC171-205ENST00000472806 COL6A3P12111 3177 aa6.2□□□□□ -1.42
CCDC171-205ENST00000472806 TRBV24-1A0A075B6N3 115 aa6.2□□□□□ -1.42
CCDC171-205ENST00000472806 FAM90A27PA6NNH2 459 aa6.2□□□□□ -1.42
CCDC171-205ENST00000472806 HMGB3O15347 200 aaKnown RBP6.2□□□□□ -1.42
CCDC171-205ENST00000472806 YIF1AO95070 293 aa6.2□□□□□ -1.42
CCDC171-205ENST00000472806 SMIM6P0DI80 62 aa6.2□□□□□ -1.42
CCDC171-205ENST00000472806 SRP14P37108 136 aaKnown RBP6.2□□□□□ -1.42
CCDC171-205ENST00000472806 COMPP49747 757 aaPredicted RBP6.2□□□□□ -1.42
CCDC171-205ENST00000472806 DLX6P56179 175 aa6.2□□□□□ -1.42
CCDC171-205ENST00000472806 SNRPEP62304 92 aaKnown RBP6.2□□□□□ -1.42
CCDC171-205ENST00000472806 RPL23P62829 140 aaKnown RBP6.2□□□□□ -1.42
CCDC171-205ENST00000472806 NHLH1Q02575 133 aa6.2□□□□□ -1.42
CCDC171-205ENST00000472806 KIAA0141Q14154 515 aaPredicted RBP6.2□□□□□ -1.42
CCDC171-205ENST00000472806 CST9LP1Q5W188 147 aa6.2□□□□□ -1.42
CCDC171-205ENST00000472806 MIC13Q5XKP0 118 aa6.2□□□□□ -1.42
CCDC171-205ENST00000472806 LYPD2Q6UXB3 125 aa6.2□□□□□ -1.42
CCDC171-205ENST00000472806 SPNS3Q6ZMD2 512 aa6.2□□□□□ -1.42
CCDC171-205ENST00000472806 Q8N7P7 452 aa6.2□□□□□ -1.42
CCDC171-205ENST00000472806 STPG3Q8N7X2 389 aa6.2□□□□□ -1.42
CCDC171-205ENST00000472806 TEX45Q8NA69 505 aa6.2□□□□□ -1.42
CCDC171-205ENST00000472806 OR8B3Q8NGG8 313 aa6.2□□□□□ -1.42
CCDC171-205ENST00000472806 Q8WTZ3 238 aa6.2□□□□□ -1.42
CCDC171-205ENST00000472806 NEU4Q8WWR8 484 aaPredicted RBP6.2□□□□□ -1.42
CCDC171-205ENST00000472806 C22orf15Q8WYQ4 148 aa6.2□□□□□ -1.42
CCDC171-205ENST00000472806 OR8B2Q96RD0 313 aa6.2□□□□□ -1.42
CCDC171-205ENST00000472806 MRPL32Q9BYC8 188 aaKnown RBP6.2□□□□□ -1.42
CCDC171-205ENST00000472806 TMPRSS5Q9H3S3 457 aa6.2□□□□□ -1.42
CCDC171-205ENST00000472806 NDUFA4L2Q9NRX3 87 aa6.2□□□□□ -1.42
CCDC171-205ENST00000472806 TECRQ9NZ01 308 aaKnown RBP6.2□□□□□ -1.42
CCDC171-205ENST00000472806 DOK5Q9P104 306 aa6.2□□□□□ -1.42
CCDC171-205ENST00000472806 TTC28Q96AY4 2481 aa6.2□□□□□ -1.42
CCDC171-205ENST00000472806 CORTO00230 105 aa6.19□□□□□ -1.42
CCDC171-205ENST00000472806 ACTL6BO94805 426 aa6.19□□□□□ -1.42
CCDC171-205ENST00000472806 IGKV1-16P04430 117 aa6.19□□□□□ -1.42
CCDC171-205ENST00000472806 ARL14EPLP0DKL9 152 aa6.19□□□□□ -1.42
CCDC171-205ENST00000472806 RNASE2P10153 161 aaKnown RBP6.19□□□□□ -1.42
CCDC171-205ENST00000472806 AREGP15514 252 aa6.19□□□□□ -1.42
CCDC171-205ENST00000472806 GCHFRP30047 84 aa6.19□□□□□ -1.42
CCDC171-205ENST00000472806 MEOX2P50222 304 aa6.19□□□□□ -1.42
CCDC171-205ENST00000472806 BPIFB3P59826 476 aa6.19□□□□□ -1.42
CCDC171-205ENST00000472806 ERVFRD-1P60508 538 aa6.19□□□□□ -1.42
CCDC171-205ENST00000472806 SELENOTP62341 195 aa6.19□□□□□ -1.42
CCDC171-205ENST00000472806 S100A12P80511 92 aa6.19□□□□□ -1.42
CCDC171-205ENST00000472806 RPL19P84098 196 aaKnown RBP6.19□□□□□ -1.42
CCDC171-205ENST00000472806 CD69Q07108 199 aa6.19□□□□□ -1.42
CCDC171-205ENST00000472806 PQLC2Q6ZP29 291 aa6.19□□□□□ -1.42
CCDC171-205ENST00000472806 SLC16A13Q7RTY0 426 aa6.19□□□□□ -1.42
CCDC171-205ENST00000472806 C16orf82Q7Z2V1 217 aa6.19□□□□□ -1.42
CCDC171-205ENST00000472806 MMD2Q8IY49 270 aa6.19□□□□□ -1.42
CCDC171-205ENST00000472806 ZCCHC24Q8N2G6 241 aaKnown RBP6.19□□□□□ -1.42
CCDC171-205ENST00000472806 BEND2Q8NDZ0 799 aa6.19□□□□□ -1.42
CCDC171-205ENST00000472806 OR1L4Q8NGR5 311 aa6.19□□□□□ -1.42
CCDC171-205ENST00000472806 C8orf46Q8TAG6 207 aa6.19□□□□□ -1.42
CCDC171-205ENST00000472806 TMEM170AQ8WVE7 144 aa6.19□□□□□ -1.42
CCDC171-205ENST00000472806 ST6GALNAC6Q969X2 333 aa6.19□□□□□ -1.42
CCDC171-205ENST00000472806 IMMP2LQ96T52 175 aa6.19□□□□□ -1.42
CCDC171-205ENST00000472806 PFDN5Q99471 154 aa6.19□□□□□ -1.42
CCDC171-205ENST00000472806 RNF5Q99942 180 aa6.19□□□□□ -1.42
CCDC171-205ENST00000472806 CLEC7AQ9BXN2 247 aa6.19□□□□□ -1.42
CCDC171-205ENST00000472806 PATZ1Q9HBE1 687 aaKnown RBP6.19□□□□□ -1.42
CCDC171-205ENST00000472806 CTSZQ9UBR2 303 aa6.19□□□□□ -1.42
CCDC171-205ENST00000472806 FUT9Q9Y231 359 aa6.19□□□□□ -1.42
CCDC171-205ENST00000472806 LY96Q9Y6Y9 160 aa6.19□□□□□ -1.42
CCDC171-205ENST00000472806 URB1O60287 2271 aaKnown RBP6.19□□□□□ -1.42
CCDC171-205ENST00000472806 DSCAMO60469 2012 aa6.18□□□□□ -1.42
CCDC171-205ENST00000472806 DSCAML1Q8TD84 2053 aa6.18□□□□□ -1.42
CCDC171-205ENST00000472806 TGIF2-C20orf24A0A0A6YYL0 155 aa6.18□□□□□ -1.42
CCDC171-205ENST00000472806 MDFIC2A0A1B0GVS7 189 aa6.18□□□□□ -1.42
CCDC171-205ENST00000472806 ZNF98A6NK75 572 aa6.18□□□□□ -1.42
CCDC171-205ENST00000472806 SRRM4A7MD48 611 aaKnown RBP6.18□□□□□ -1.42
CCDC171-205ENST00000472806 PPP5D1E7EU14 171 aa6.18□□□□□ -1.42
CCDC171-205ENST00000472806 IGHV2-70P01814 119 aa6.18□□□□□ -1.42
CCDC171-205ENST00000472806 IGHV2-5P01817 119 aa6.18□□□□□ -1.42
CCDC171-205ENST00000472806 LIPFP07098 398 aa6.18□□□□□ -1.42
CCDC171-205ENST00000472806 C1QTNF9P0C862 333 aa6.18□□□□□ -1.42
CCDC171-205ENST00000472806 IGFBP2P18065 325 aa6.18□□□□□ -1.42
CCDC171-205ENST00000472806 GALR1P47211 349 aa6.18□□□□□ -1.42
CCDC171-205ENST00000472806 FABP9Q0Z7S8 132 aa6.18□□□□□ -1.42
CCDC171-205ENST00000472806 UTF1Q5T230 341 aa6.18□□□□□ -1.42
CCDC171-205ENST00000472806 OR4P4Q8NGL7 312 aa6.18□□□□□ -1.42
CCDC171-205ENST00000472806 LINC01560Q8TB33 94 aa6.18□□□□□ -1.42
CCDC171-205ENST00000472806 GATAD1Q8WUU5 269 aa6.18□□□□□ -1.42
CCDC171-205ENST00000472806 SSMEM1Q8WWF3 244 aa6.18□□□□□ -1.42
CCDC171-205ENST00000472806 C12orf57Q99622 126 aa6.18□□□□□ -1.42
CCDC171-205ENST00000472806 SRSF8Q9BRL6 282 aaKnown RBP6.18□□□□□ -1.42
CCDC171-205ENST00000472806 SRD5A3Q9H8P0 318 aa6.18□□□□□ -1.42
CCDC171-205ENST00000472806 CBLN4Q9NTU7 201 aa6.18□□□□□ -1.42
CCDC171-205ENST00000472806 INSIG2Q9Y5U4 225 aa6.18□□□□□ -1.42
CCDC171-205ENST00000472806 URGCP-MRPS24S4R325 110 aa6.18□□□□□ -1.42
CCDC171-205ENST00000472806 CNOT1A5YKK6 2376 aaKnown RBP6.17□□□□□ -1.42
CCDC171-205ENST00000472806 CACNA1DQ01668 2161 aa6.17□□□□□ -1.42
CCDC171-205ENST00000472806 SVILO95425 2214 aa6.17□□□□□ -1.42
CCDC171-205ENST00000472806 USF3Q68DE3 2245 aa6.17□□□□□ -1.42
CCDC171-205ENST00000472806 TRAV9-1A0A075B6T8 112 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms