RNA–Protein interactions for RNA: ENST00000472438.5

UQCRC1-208, Transcript of ubiquinol-cytochrome c reductase core protein 1, human

TSL 2

Gene UQCRC1, Length 477 nt, Biotype retained intron, Subcellular localisation Mitochondria, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UQCRC1-208	ENST00000472438	MDK	P21741	143 aa	Predicted RBP	11.17	□□□□□ -0.62
UQCRC1-208	ENST00000472438	C5orf64	Q2M2E5	130 aa		11.17	□□□□□ -0.62
UQCRC1-208	ENST00000472438	AKR1C8P	Q5T2L2	129 aa		11.17	□□□□□ -0.62
UQCRC1-208	ENST00000472438	BTNL8	Q6UX41	500 aa		11.17	□□□□□ -0.62
UQCRC1-208	ENST00000472438	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	11.17	□□□□□ -0.62
UQCRC1-208	ENST00000472438	CENPV	Q7Z7K6	275 aa	Predicted RBP	11.17	□□□□□ -0.62
UQCRC1-208	ENST00000472438	KRTAP1-3	Q8IUG1	177 aa		11.17	□□□□□ -0.62
UQCRC1-208	ENST00000472438	FBXO7	Q9Y3I1	522 aa		11.17	□□□□□ -0.62
UQCRC1-208	ENST00000472438	SMCO3	A2RU48	225 aa		11.16	□□□□□ -0.62
UQCRC1-208	ENST00000472438	FNDC10	F2Z333	226 aa		11.16	□□□□□ -0.62
UQCRC1-208	ENST00000472438		J3QLI3	93 aa		11.16	□□□□□ -0.62
UQCRC1-208	ENST00000472438	IGHV4-38-2	P0DP08	117 aa		11.16	□□□□□ -0.62
UQCRC1-208	ENST00000472438	SUB1	P53999	127 aa	Known RBP eCLIP	11.16	□□□□□ -0.62
UQCRC1-208	ENST00000472438	SSBP2	P81877	361 aa	Predicted RBP	11.16	□□□□□ -0.62
UQCRC1-208	ENST00000472438	AANAT	Q16613	207 aa		11.16	□□□□□ -0.62
UQCRC1-208	ENST00000472438	FAM213B	Q8TBF2	198 aa		11.16	□□□□□ -0.62
UQCRC1-208	ENST00000472438	SRSF12	Q8WXF0	261 aa	Known RBP	11.16	□□□□□ -0.62
UQCRC1-208	ENST00000472438	P2RX4	Q99571	388 aa		11.16	□□□□□ -0.62
UQCRC1-208	ENST00000472438	SRSF8	Q9BRL6	282 aa	Known RBP	11.16	□□□□□ -0.62
UQCRC1-208	ENST00000472438	ANKRD34B	A5PLL1	514 aa		11.15	□□□□□ -0.62
UQCRC1-208	ENST00000472438	TEX22	C9J3V5	150 aa		11.15	□□□□□ -0.62
UQCRC1-208	ENST00000472438	IGHV4-31	P0DP07	118 aa		11.15	□□□□□ -0.62
UQCRC1-208	ENST00000472438	SERF2	P84101	59 aa		11.15	□□□□□ -0.62
UQCRC1-208	ENST00000472438	ARSJ	Q5FYB0	599 aa	Predicted RBP	11.15	□□□□□ -0.62
UQCRC1-208	ENST00000472438	DPPA3	Q6W0C5	159 aa		11.15	□□□□□ -0.62
UQCRC1-208	ENST00000472438	IL34	Q6ZMJ4	242 aa		11.15	□□□□□ -0.62
UQCRC1-208	ENST00000472438	EIF4E3	Q8N5X7	224 aa	Known RBP	11.15	□□□□□ -0.62
UQCRC1-208	ENST00000472438	ZNF114	Q8NC26	417 aa		11.15	□□□□□ -0.62
UQCRC1-208	ENST00000472438	MAPK1IP1L	Q8NDC0	245 aa		11.15	□□□□□ -0.62
UQCRC1-208	ENST00000472438	MARC2	Q969Z3	335 aa		11.15	□□□□□ -0.62
UQCRC1-208	ENST00000472438		Q96MF0	132 aa		11.15	□□□□□ -0.62
UQCRC1-208	ENST00000472438	HRH4	Q9H3N8	390 aa		11.15	□□□□□ -0.62
UQCRC1-208	ENST00000472438	NPVF	Q9HCQ7	196 aa		11.15	□□□□□ -0.62
UQCRC1-208	ENST00000472438	C1RL	Q9NZP8	487 aa		11.15	□□□□□ -0.62
UQCRC1-208	ENST00000472438	NCBP2L	A6PVI3	153 aa	Known RBP	11.14	□□□□□ -0.63
UQCRC1-208	ENST00000472438	NUDT19	A8MXV4	375 aa		11.14	□□□□□ -0.63
UQCRC1-208	ENST00000472438	C17orf112	F2Z3M2	114 aa		11.14	□□□□□ -0.63
UQCRC1-208	ENST00000472438	MPDU1	O75352	247 aa		11.14	□□□□□ -0.63
UQCRC1-208	ENST00000472438	CNIH1	O95406	144 aa		11.14	□□□□□ -0.63
UQCRC1-208	ENST00000472438	AVP	P01185	164 aa		11.14	□□□□□ -0.63
UQCRC1-208	ENST00000472438	FHIT	P49789	147 aa		11.14	□□□□□ -0.63
UQCRC1-208	ENST00000472438	CD69	Q07108	199 aa		11.14	□□□□□ -0.63
UQCRC1-208	ENST00000472438	ZNF616	Q08AN1	781 aa		11.14	□□□□□ -0.63
UQCRC1-208	ENST00000472438	TMEM249	Q2WGJ8	235 aa		11.14	□□□□□ -0.63
UQCRC1-208	ENST00000472438	KLF17	Q5JT82	389 aa	Predicted RBP	11.14	□□□□□ -0.63
UQCRC1-208	ENST00000472438	PVRIG	Q6DKI7	326 aa		11.14	□□□□□ -0.63
UQCRC1-208	ENST00000472438	TREML4	Q6UXN2	200 aa		11.14	□□□□□ -0.63
UQCRC1-208	ENST00000472438	BRD3OS	Q6XYD6	125 aa		11.14	□□□□□ -0.63
UQCRC1-208	ENST00000472438	ZNF709	Q8N972	641 aa		11.14	□□□□□ -0.63
UQCRC1-208	ENST00000472438	LYPD6B	Q8NI32	183 aa		11.14	□□□□□ -0.63
UQCRC1-208	ENST00000472438	RNASEH2C	Q8TDP1	164 aa	Known RBP	11.14	□□□□□ -0.63
UQCRC1-208	ENST00000472438	NPCDR1	Q9BY65	106 aa		11.14	□□□□□ -0.63
UQCRC1-208	ENST00000472438	MEGF9	Q9H1U4	602 aa		11.14	□□□□□ -0.63
UQCRC1-208	ENST00000472438	FBN2	P35556	2912 aa		11.13	□□□□□ -0.63
UQCRC1-208	ENST00000472438	UTP20	O75691	2785 aa	Known RBP	11.13	□□□□□ -0.63
UQCRC1-208	ENST00000472438		A0A0U1RQK1	487 aa		11.13	□□□□□ -0.63
UQCRC1-208	ENST00000472438	RAB19	A4D1S5	217 aa		11.13	□□□□□ -0.63
UQCRC1-208	ENST00000472438	REG1A	P05451	166 aa		11.13	□□□□□ -0.63
UQCRC1-208	ENST00000472438	AREG	P15514	252 aa		11.13	□□□□□ -0.63
UQCRC1-208	ENST00000472438	GPX4	P36969	197 aa	Predicted RBP	11.13	□□□□□ -0.63
UQCRC1-208	ENST00000472438	ELL	P55199	621 aa	Predicted RBP	11.13	□□□□□ -0.63
UQCRC1-208	ENST00000472438	FXYD3	Q14802	87 aa		11.13	□□□□□ -0.63
UQCRC1-208	ENST00000472438	SLC16A13	Q7RTY0	426 aa		11.13	□□□□□ -0.63
UQCRC1-208	ENST00000472438		Q8N9W7	124 aa		11.13	□□□□□ -0.63
UQCRC1-208	ENST00000472438	ABHD5	Q8WTS1	349 aa		11.13	□□□□□ -0.63
UQCRC1-208	ENST00000472438	SSMEM1	Q8WWF3	244 aa		11.13	□□□□□ -0.63
UQCRC1-208	ENST00000472438	CACNG8	Q8WXS5	425 aa		11.13	□□□□□ -0.63
UQCRC1-208	ENST00000472438	MGST2	Q99735	147 aa		11.13	□□□□□ -0.63
UQCRC1-208	ENST00000472438	LSM4	Q9Y4Z0	139 aa	Known RBP	11.13	□□□□□ -0.63
UQCRC1-208	ENST00000472438	SOX15	O60248	233 aa		11.12	□□□□□ -0.63
UQCRC1-208	ENST00000472438	TGFA	P01135	160 aa		11.12	□□□□□ -0.63
UQCRC1-208	ENST00000472438	CX3CL1	P78423	397 aa		11.12	□□□□□ -0.63
UQCRC1-208	ENST00000472438	AKR1C1	Q04828	323 aa		11.12	□□□□□ -0.63
UQCRC1-208	ENST00000472438	TMEM41B	Q5BJD5	291 aa		11.12	□□□□□ -0.63
UQCRC1-208	ENST00000472438	FFAR4	Q5NUL3	377 aa		11.12	□□□□□ -0.63
UQCRC1-208	ENST00000472438	ACSM6	Q6P461	480 aa		11.12	□□□□□ -0.63
UQCRC1-208	ENST00000472438	OR1P1	Q8NH06	330 aa		11.12	□□□□□ -0.63
UQCRC1-208	ENST00000472438	SLC35E1	Q96K37	410 aa		11.12	□□□□□ -0.63
UQCRC1-208	ENST00000472438	VSIR	Q9H7M9	311 aa		11.12	□□□□□ -0.63
UQCRC1-208	ENST00000472438	RPRM	Q9NS64	109 aa		11.12	□□□□□ -0.63
UQCRC1-208	ENST00000472438	F11R	Q9Y624	299 aa	Known RBP	11.12	□□□□□ -0.63
UQCRC1-208	ENST00000472438	TEX15	Q9BXT5	2789 aa		11.12	□□□□□ -0.63
UQCRC1-208	ENST00000472438	UNC79	Q9P2D8	2635 aa		11.12	□□□□□ -0.63
UQCRC1-208	ENST00000472438		I3L521	148 aa		11.11	□□□□□ -0.63
UQCRC1-208	ENST00000472438	TSPAN15	O95858	294 aa		11.11	□□□□□ -0.63
UQCRC1-208	ENST00000472438	MB	P02144	154 aa		11.11	□□□□□ -0.63
UQCRC1-208	ENST00000472438	APELA	P0DMC3	54 aa		11.11	□□□□□ -0.63
UQCRC1-208	ENST00000472438	OPRK1	P41145	380 aa		11.11	□□□□□ -0.63
UQCRC1-208	ENST00000472438	MFAP2	P55001	183 aa		11.11	□□□□□ -0.63
UQCRC1-208	ENST00000472438	MLANA	Q16655	118 aa		11.11	□□□□□ -0.63
UQCRC1-208	ENST00000472438	TEPP	Q6URK8	271 aa		11.11	□□□□□ -0.63
UQCRC1-208	ENST00000472438	ZNF562	Q6V9R5	426 aa		11.11	□□□□□ -0.63
UQCRC1-208	ENST00000472438	TMEM144	Q7Z5S9	345 aa		11.11	□□□□□ -0.63
UQCRC1-208	ENST00000472438	COMMD1	Q8N668	190 aa		11.11	□□□□□ -0.63
UQCRC1-208	ENST00000472438	ARPC1A	Q92747	370 aa		11.11	□□□□□ -0.63
UQCRC1-208	ENST00000472438	GGTLC1	Q9BX51	225 aa		11.11	□□□□□ -0.63
UQCRC1-208	ENST00000472438	KCNIP2	Q9NS61	270 aa		11.11	□□□□□ -0.63
UQCRC1-208	ENST00000472438	FAM96B	Q9Y3D0	163 aa		11.11	□□□□□ -0.63
UQCRC1-208	ENST00000472438	SOX21	Q9Y651	276 aa	Predicted RBP	11.11	□□□□□ -0.63
UQCRC1-208	ENST00000472438	CORT	O00230	105 aa		11.1	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms