RNA–Protein interactions for RNA: ENST00000466963.1

CXXC4-202, Transcript of CXXC finger protein 4, humanhuman

TSL 1 (best)

Gene CXXC4, Length 3,130 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-202ENST00000466963 ZNF493Q6ZR52 646 aa4.09□□□□□ -1.75
CXXC4-202ENST00000466963 LRRTM1Q86UE6 522 aa4.09□□□□□ -1.75
CXXC4-202ENST00000466963 RAB3CQ96E17 227 aa4.09□□□□□ -1.75
CXXC4-202ENST00000466963 MND1Q9BWT6 205 aa4.09□□□□□ -1.75
CXXC4-202ENST00000466963 ACOT13Q9NPJ3 140 aa4.09□□□□□ -1.75
CXXC4-202ENST00000466963 A0A1B0GW64 132 aa4.08□□□□□ -1.76
CXXC4-202ENST00000466963 SRRM4A7MD48 611 aaKnown RBP4.08□□□□□ -1.76
CXXC4-202ENST00000466963 MYL12BO14950 172 aa4.08□□□□□ -1.76
CXXC4-202ENST00000466963 PLA2G1BP04054 148 aaKnown RBP4.08□□□□□ -1.76
CXXC4-202ENST00000466963 RBMY1A1P0DJD3 496 aaKnown RBP4.08□□□□□ -1.76
CXXC4-202ENST00000466963 RBMY1CP0DJD4 496 aa4.08□□□□□ -1.76
CXXC4-202ENST00000466963 SLC25A4P12235 298 aa4.08□□□□□ -1.76
CXXC4-202ENST00000466963 RPL35AP18077 110 aaKnown RBP4.08□□□□□ -1.76
CXXC4-202ENST00000466963 NPPCP23582 126 aa4.08□□□□□ -1.76
CXXC4-202ENST00000466963 CRYBB3P26998 211 aa4.08□□□□□ -1.76
CXXC4-202ENST00000466963 GPR183P32249 361 aa4.08□□□□□ -1.76
CXXC4-202ENST00000466963 EWSR1Q01844 656 aaKnown RBP eCLIP4.08□□□□□ -1.76
CXXC4-202ENST00000466963 PPP1R8Q12972 351 aaKnown RBP4.08□□□□□ -1.76
CXXC4-202ENST00000466963 RBMY1FQ15415 496 aaKnown RBP4.08□□□□□ -1.76
CXXC4-202ENST00000466963 ETFRF1Q6IPR1 90 aa4.08□□□□□ -1.76
CXXC4-202ENST00000466963 LYPD1Q8N2G4 141 aa4.08□□□□□ -1.76
CXXC4-202ENST00000466963 OR1S2Q8NGQ3 325 aa4.08□□□□□ -1.76
CXXC4-202ENST00000466963 ATG101Q9BSB4 218 aa4.08□□□□□ -1.76
CXXC4-202ENST00000466963 SCPEP1Q9HB40 452 aa4.08□□□□□ -1.76
CXXC4-202ENST00000466963 NDUFA4L2Q9NRX3 87 aa4.08□□□□□ -1.76
CXXC4-202ENST00000466963 ERVFC1-1P60608 527 aa4.08□□□□□ -1.76
CXXC4-202ENST00000466963 ERHP84090 104 aaKnown RBP4.08□□□□□ -1.76
CXXC4-202ENST00000466963 FOXI2Q6ZQN5 318 aa4.08□□□□□ -1.76
CXXC4-202ENST00000466963 SSX9Q7RTT3 188 aa4.08□□□□□ -1.76
CXXC4-202ENST00000466963 MFSD4AQ8N468 514 aa4.08□□□□□ -1.76
CXXC4-202ENST00000466963 OR13F1Q8NGS4 319 aa4.08□□□□□ -1.76
CXXC4-202ENST00000466963 OR10R2Q8NGX6 335 aa4.08□□□□□ -1.76
CXXC4-202ENST00000466963 ZNF414Q96IQ9 312 aa4.08□□□□□ -1.76
CXXC4-202ENST00000466963 C18orf15Q96N68 181 aa4.08□□□□□ -1.76
CXXC4-202ENST00000466963 GPR82Q96P67 336 aa4.08□□□□□ -1.76
CXXC4-202ENST00000466963 PARP12Q9H0J9 701 aaKnown RBP4.08□□□□□ -1.76
CXXC4-202ENST00000466963 SH3BGRL3Q9H299 93 aa4.08□□□□□ -1.76
CXXC4-202ENST00000466963 BANF2Q9H503 90 aa4.08□□□□□ -1.76
CXXC4-202ENST00000466963 OR1A1Q9P1Q5 309 aa4.08□□□□□ -1.76
CXXC4-202ENST00000466963 ADAM30Q9UKF2 790 aa4.08□□□□□ -1.76
CXXC4-202ENST00000466963 PCLOQ9Y6V0 5065 aa4.08□□□□□ -1.76
CXXC4-202ENST00000466963 HYDINQ4G0P3 5121 aa4.08□□□□□ -1.76
CXXC4-202ENST00000466963 TRAV9-2A0A087WT02 112 aa4.08□□□□□ -1.76
CXXC4-202ENST00000466963 LOC100130705A0A1B0GUX0 176 aa4.08□□□□□ -1.76
CXXC4-202ENST00000466963 MFNGO00587 321 aa4.08□□□□□ -1.76
CXXC4-202ENST00000466963 DENRO43583 198 aaKnown RBP4.08□□□□□ -1.76
CXXC4-202ENST00000466963 FCGR3BO75015 233 aa4.08□□□□□ -1.76
CXXC4-202ENST00000466963 DUSP14O95147 198 aaKnown RBP4.08□□□□□ -1.76
CXXC4-202ENST00000466963 HBE1P02100 147 aa4.08□□□□□ -1.76
CXXC4-202ENST00000466963 HIST1H1DP16402 221 aaKnown RBP4.08□□□□□ -1.76
CXXC4-202ENST00000466963 CALRP27797 417 aaKnown RBP4.08□□□□□ -1.76
CXXC4-202ENST00000466963 PSMB3P49720 205 aa4.08□□□□□ -1.76
CXXC4-202ENST00000466963 YPEL3P61236 119 aaPredicted RBP4.08□□□□□ -1.76
CXXC4-202ENST00000466963 IDNKQ5T6J7 187 aa4.08□□□□□ -1.76
CXXC4-202ENST00000466963 OR2G6Q5TZ20 316 aa4.08□□□□□ -1.76
CXXC4-202ENST00000466963 Q6ZTC4 211 aa4.08□□□□□ -1.76
CXXC4-202ENST00000466963 C6orf201Q7Z4U5 140 aa4.08□□□□□ -1.76
CXXC4-202ENST00000466963 CEACAM19Q7Z692 300 aa4.08□□□□□ -1.76
CXXC4-202ENST00000466963 WFDC10AQ9H1F0 79 aa4.08□□□□□ -1.76
CXXC4-202ENST00000466963 Q9H3A6 140 aa4.08□□□□□ -1.76
CXXC4-202ENST00000466963 U3KQE9 123 aa4.08□□□□□ -1.76
CXXC4-202ENST00000466963 SSX5O60225 188 aa4.07□□□□□ -1.76
CXXC4-202ENST00000466963 HLA-DRB4P13762 266 aa4.07□□□□□ -1.76
CXXC4-202ENST00000466963 PAX9P55771 341 aa4.07□□□□□ -1.76
CXXC4-202ENST00000466963 MS4A6AQ9H2W1 248 aa4.07□□□□□ -1.76
CXXC4-202ENST00000466963 CLEC5AQ9NY25 188 aa4.07□□□□□ -1.76
CXXC4-202ENST00000466963 KCNK7Q9Y2U2 307 aa4.07□□□□□ -1.76
CXXC4-202ENST00000466963 HLA-DRB4X5D2U9 266 aa4.07□□□□□ -1.76
CXXC4-202ENST00000466963 TRAV8-7A0A075B6U6 113 aa4.07□□□□□ -1.76
CXXC4-202ENST00000466963 CBY3A6NI87 242 aa4.07□□□□□ -1.76
CXXC4-202ENST00000466963 ST8SIA3O43173 380 aa4.07□□□□□ -1.76
CXXC4-202ENST00000466963 BAG2O95816 211 aa4.07□□□□□ -1.76
CXXC4-202ENST00000466963 IFNA5P01569 189 aa4.07□□□□□ -1.76
CXXC4-202ENST00000466963 Q56UQ5 140 aa4.07□□□□□ -1.76
CXXC4-202ENST00000466963 TCTEX1D2Q8WW35 142 aa4.07□□□□□ -1.76
CXXC4-202ENST00000466963 GPHA2Q96T91 129 aa4.07□□□□□ -1.76
CXXC4-202ENST00000466963 ZNF446Q9NWS9 450 aa4.07□□□□□ -1.76
CXXC4-202ENST00000466963 DKK2Q9UBU2 259 aa4.07□□□□□ -1.76
CXXC4-202ENST00000466963 OAZ3Q9UMX2 235 aa4.07□□□□□ -1.76
CXXC4-202ENST00000466963 MRPS16Q9Y3D3 137 aaKnown RBP4.07□□□□□ -1.76
CXXC4-202ENST00000466963 CSMD3Q7Z407 3707 aa4.07□□□□□ -1.76
CXXC4-202ENST00000466963 IGKV1-6A0A0C4DH72 117 aa4.06□□□□□ -1.76
CXXC4-202ENST00000466963 CTSGP08311 255 aa4.06□□□□□ -1.76
CXXC4-202ENST00000466963 SLAQ13239 276 aa4.06□□□□□ -1.76
CXXC4-202ENST00000466963 UNC119Q13432 240 aa4.06□□□□□ -1.76
CXXC4-202ENST00000466963 UNQ9165/PRO28630Q6UXU0 137 aa4.06□□□□□ -1.76
CXXC4-202ENST00000466963 GNG7O60262 68 aa4.06□□□□□ -1.76
CXXC4-202ENST00000466963 HNRNPCP07910 306 aaKnown RBP eCLIP4.06□□□□□ -1.76
CXXC4-202ENST00000466963 NAT1P18440 290 aa4.06□□□□□ -1.76
CXXC4-202ENST00000466963 RPS25P62851 125 aaKnown RBP4.06□□□□□ -1.76
CXXC4-202ENST00000466963 ACSM3Q53FZ2 586 aa4.06□□□□□ -1.76
CXXC4-202ENST00000466963 NANOGP1Q8N7R0 232 aa4.06□□□□□ -1.76
CXXC4-202ENST00000466963 ZNRF2Q8NHG8 242 aa4.06□□□□□ -1.76
CXXC4-202ENST00000466963 UBQLN2Q9UHD9 624 aa4.06□□□□□ -1.76
CXXC4-202ENST00000466963 FAT2Q9NYQ8 4349 aa4.06□□□□□ -1.76
CXXC4-202ENST00000466963 DNAH2Q9P225 4427 aa4.06□□□□□ -1.76
CXXC4-202ENST00000466963 ELOA3CA0A087WX78 387 aaPredicted RBP4.06□□□□□ -1.76
CXXC4-202ENST00000466963 DEFB131AP59861 70 aa4.06□□□□□ -1.76
CXXC4-202ENST00000466963 USF2Q15853 346 aaPredicted RBP4.06□□□□□ -1.76
CXXC4-202ENST00000466963 SLC25A24Q6NUK1 477 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms