RNA–Protein interactions for RNA: ENST00000465459.2

HLA-F-223, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-223ENST00000465459 GSKIPQ9P0R6 139 aa11.49□□□□□ -0.57
HLA-F-223ENST00000465459 F11RQ9Y624 299 aaKnown RBP11.49□□□□□ -0.57
HLA-F-223ENST00000465459 TRBV9A0A0B4J1U6 114 aa11.48□□□□□ -0.57
HLA-F-223ENST00000465459 GOSR2O14653 212 aa11.48□□□□□ -0.57
HLA-F-223ENST00000465459 SYNGR2O43760 224 aa11.48□□□□□ -0.57
HLA-F-223ENST00000465459 PF4V1P10720 104 aa11.48□□□□□ -0.57
HLA-F-223ENST00000465459 DEFA4P12838 97 aa11.48□□□□□ -0.57
HLA-F-223ENST00000465459 SNCAP37840 140 aa11.48□□□□□ -0.57
HLA-F-223ENST00000465459 HTR2BP41595 481 aa11.48□□□□□ -0.57
HLA-F-223ENST00000465459 RAB9AP51151 201 aa11.48□□□□□ -0.57
HLA-F-223ENST00000465459 SUB1P53999 127 aaKnown RBP eCLIP11.48□□□□□ -0.57
HLA-F-223ENST00000465459 IL15RAQ13261 267 aa11.48□□□□□ -0.57
HLA-F-223ENST00000465459 C2orf68Q2NKX9 166 aa11.48□□□□□ -0.57
HLA-F-223ENST00000465459 C10orf99Q6UWK7 81 aa11.48□□□□□ -0.57
HLA-F-223ENST00000465459 NOXA1Q86UR1 476 aa11.48□□□□□ -0.57
HLA-F-223ENST00000465459 C3orf56Q8N813 242 aa11.48□□□□□ -0.57
HLA-F-223ENST00000465459 MYOZ3Q8TDC0 251 aa11.48□□□□□ -0.57
HLA-F-223ENST00000465459 DTD1Q8TEA8 209 aa11.48□□□□□ -0.57
HLA-F-223ENST00000465459 CITED1Q99966 193 aa11.48□□□□□ -0.57
HLA-F-223ENST00000465459 NMES1Q9C002 83 aa11.48□□□□□ -0.57
HLA-F-223ENST00000465459 RBKSQ9H477 322 aa11.48□□□□□ -0.57
HLA-F-223ENST00000465459 ZNF355PQ9NSJ1 428 aa11.48□□□□□ -0.57
HLA-F-223ENST00000465459 THYN1Q9P016 225 aa11.48□□□□□ -0.57
HLA-F-223ENST00000465459 A0A0G2JLM5 398 aa11.47□□□□□ -0.57
HLA-F-223ENST00000465459 FAM223BA6NKX1 122 aa11.47□□□□□ -0.57
HLA-F-223ENST00000465459 REG1AP05451 166 aa11.47□□□□□ -0.57
HLA-F-223ENST00000465459 KRTAP10-3P60369 221 aa11.47□□□□□ -0.57
HLA-F-223ENST00000465459 SRSF4Q08170 494 aaKnown RBP11.47□□□□□ -0.57
HLA-F-223ENST00000465459 BSXQ3C1V8 233 aa11.47□□□□□ -0.57
HLA-F-223ENST00000465459 SPINK9Q5DT21 86 aa11.47□□□□□ -0.57
HLA-F-223ENST00000465459 TCTEX1D4Q5JR98 221 aa11.47□□□□□ -0.57
HLA-F-223ENST00000465459 SHISA2Q6UWI4 295 aa11.47□□□□□ -0.57
HLA-F-223ENST00000465459 FAM223AQ8IWN6 122 aa11.47□□□□□ -0.57
HLA-F-223ENST00000465459 NECAP1Q8NC96 275 aa11.47□□□□□ -0.57
HLA-F-223ENST00000465459 ASB13Q8WXK3 278 aa11.47□□□□□ -0.57
HLA-F-223ENST00000465459 USMG5Q96IX5 58 aa11.47□□□□□ -0.57
HLA-F-223ENST00000465459 P2RX4Q99571 388 aa11.47□□□□□ -0.57
HLA-F-223ENST00000465459 MGAT4CQ9UBM8 478 aa11.47□□□□□ -0.57
HLA-F-223ENST00000465459 TSSC4Q9Y5U2 329 aaPredicted RBP11.47□□□□□ -0.57
HLA-F-223ENST00000465459 U3KQ87 197 aa11.47□□□□□ -0.57
HLA-F-223ENST00000465459 IGLV11-55A0A075B6I3 123 aa11.46□□□□□ -0.57
HLA-F-223ENST00000465459 TCRBV4S1A1TA0A5B7 111 aa11.46□□□□□ -0.57
HLA-F-223ENST00000465459 WRBO00258 174 aa11.46□□□□□ -0.57
HLA-F-223ENST00000465459 TRGV3P03979 118 aa11.46□□□□□ -0.57
HLA-F-223ENST00000465459 CD28P10747 220 aa11.46□□□□□ -0.57
HLA-F-223ENST00000465459 CDX1P47902 265 aaPredicted RBP11.46□□□□□ -0.57
HLA-F-223ENST00000465459 H2BFSP57053 126 aa11.46□□□□□ -0.57
HLA-F-223ENST00000465459 TAS2R30P59541 319 aa11.46□□□□□ -0.57
HLA-F-223ENST00000465459 RRAS2P62070 204 aaPredicted RBP11.46□□□□□ -0.57
HLA-F-223ENST00000465459 PVRIGQ6DKI7 326 aa11.46□□□□□ -0.57
HLA-F-223ENST00000465459 Q6ZNX1 250 aa11.46□□□□□ -0.57
HLA-F-223ENST00000465459 UBE2E2Q96LR5 201 aa11.46□□□□□ -0.57
HLA-F-223ENST00000465459 FANCD2OSQ96PS1 177 aa11.46□□□□□ -0.57
HLA-F-223ENST00000465459 RAB40CQ96S21 281 aa11.46□□□□□ -0.57
HLA-F-223ENST00000465459 KLK15Q9H2R5 256 aa11.46□□□□□ -0.57
HLA-F-223ENST00000465459 CORTO00230 105 aa11.45□□□□□ -0.58
HLA-F-223ENST00000465459 NXPH3O95157 252 aa11.45□□□□□ -0.58
HLA-F-223ENST00000465459 MBPP02686 304 aaPredicted RBP11.45□□□□□ -0.58
HLA-F-223ENST00000465459 RPLP1P05386 114 aaKnown RBP11.45□□□□□ -0.58
HLA-F-223ENST00000465459 RNASE2P10153 161 aaKnown RBP11.45□□□□□ -0.58
HLA-F-223ENST00000465459 TPPP2P59282 170 aa11.45□□□□□ -0.58
HLA-F-223ENST00000465459 RPP30P78346 268 aaKnown RBP11.45□□□□□ -0.58
HLA-F-223ENST00000465459 RHOGP84095 191 aa11.45□□□□□ -0.58
HLA-F-223ENST00000465459 KIAA0141Q14154 515 aaPredicted RBP11.45□□□□□ -0.58
HLA-F-223ENST00000465459 C2orf83Q53S99 150 aa11.45□□□□□ -0.58
HLA-F-223ENST00000465459 FAM209BQ5JX69 171 aa11.45□□□□□ -0.58
HLA-F-223ENST00000465459 NDUFA11Q86Y39 141 aa11.45□□□□□ -0.58
HLA-F-223ENST00000465459 ZNF491Q8N8L2 437 aa11.45□□□□□ -0.58
HLA-F-223ENST00000465459 SLC24A4Q8NFF2 622 aa11.45□□□□□ -0.58
HLA-F-223ENST00000465459 MS4A10Q96PG2 267 aa11.45□□□□□ -0.58
HLA-F-223ENST00000465459 CITED2Q99967 270 aaPredicted RBP11.45□□□□□ -0.58
HLA-F-223ENST00000465459 MAGT1Q9H0U3 335 aa11.45□□□□□ -0.58
HLA-F-223ENST00000465459 SIX6O95475 246 aa11.44□□□□□ -0.58
HLA-F-223ENST00000465459 SCGB1D2O95969 90 aa11.44□□□□□ -0.58
HLA-F-223ENST00000465459 POLR2GP62487 172 aaKnown RBP eCLIP11.44□□□□□ -0.58
HLA-F-223ENST00000465459 RPL23AP62750 156 aaKnown RBP11.44□□□□□ -0.58
HLA-F-223ENST00000465459 FCN2Q15485 313 aa11.44□□□□□ -0.58
HLA-F-223ENST00000465459 SLC25A24Q6NUK1 477 aa11.44□□□□□ -0.58
HLA-F-223ENST00000465459 SMIM8Q96KF7 97 aa11.44□□□□□ -0.58
HLA-F-223ENST00000465459 FBXL7Q9UJT9 491 aa11.44□□□□□ -0.58
HLA-F-223ENST00000465459 IFNA10P01566 189 aa11.43□□□□□ -0.58
HLA-F-223ENST00000465459 PRH1P02810 166 aa11.43□□□□□ -0.58
HLA-F-223ENST00000465459 CXCL3P19876 107 aa11.43□□□□□ -0.58
HLA-F-223ENST00000465459 PVALBP20472 110 aaPredicted RBP11.43□□□□□ -0.58
HLA-F-223ENST00000465459 NPY1RP25929 384 aa11.43□□□□□ -0.58
HLA-F-223ENST00000465459 MFAP2P55001 183 aa11.43□□□□□ -0.58
HLA-F-223ENST00000465459 RUNX1Q01196 453 aa11.43□□□□□ -0.58
HLA-F-223ENST00000465459 ATP5G2Q06055 141 aa11.43□□□□□ -0.58
HLA-F-223ENST00000465459 EXOSC2Q13868 293 aaKnown RBP11.43□□□□□ -0.58
HLA-F-223ENST00000465459 C11orf44Q8N8P7 122 aa11.43□□□□□ -0.58
HLA-F-223ENST00000465459 OR11H7Q8NGC8 314 aa11.43□□□□□ -0.58
HLA-F-223ENST00000465459 SPATA3Q8NHX4 192 aa11.43□□□□□ -0.58
HLA-F-223ENST00000465459 RNASEH2CQ8TDP1 164 aaKnown RBP11.43□□□□□ -0.58
HLA-F-223ENST00000465459 VN1R17PQ8TDU5 208 aa11.43□□□□□ -0.58
HLA-F-223ENST00000465459 CXorf58Q96LI9 332 aa11.43□□□□□ -0.58
HLA-F-223ENST00000465459 ATP6V0BQ99437 205 aa11.43□□□□□ -0.58
HLA-F-223ENST00000465459 RCL1Q9Y2P8 373 aaKnown RBP11.43□□□□□ -0.58
HLA-F-223ENST00000465459 DMRT1Q9Y5R6 373 aa11.43□□□□□ -0.58
HLA-F-223ENST00000465459 STAB1Q9NY15 2570 aa11.43□□□□□ -0.58
HLA-F-223ENST00000465459 K7EPK0 472 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms