RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 OR4S2Q8NH73 311 aa6.54□□□□□ -1.36
APP-213ENST00000464867 SCARB1Q8WTV0 552 aa6.54□□□□□ -1.36
APP-213ENST00000464867 LGALS12Q96DT0 336 aa6.54□□□□□ -1.36
APP-213ENST00000464867 SRSF8Q9BRL6 282 aaKnown RBP6.54□□□□□ -1.36
APP-213ENST00000464867 AIFM2Q9BRQ8 373 aa6.54□□□□□ -1.36
APP-213ENST00000464867 GINS4Q9BRT9 223 aa6.54□□□□□ -1.36
APP-213ENST00000464867 HDHD3Q9BSH5 251 aaPredicted RBP6.54□□□□□ -1.36
APP-213ENST00000464867 COMMD5Q9GZQ3 224 aa6.54□□□□□ -1.36
APP-213ENST00000464867 MAGT1Q9H0U3 335 aa6.54□□□□□ -1.36
APP-213ENST00000464867 RNF213Q63HN8 5207 aa6.54□□□□□ -1.36
APP-213ENST00000464867 IGHV3-21A0A0B4J1V1 117 aa6.53□□□□□ -1.36
APP-213ENST00000464867 FABP7O15540 132 aa6.53□□□□□ -1.36
APP-213ENST00000464867 OXTP01178 125 aa6.53□□□□□ -1.36
APP-213ENST00000464867 CTSGP08311 255 aa6.53□□□□□ -1.36
APP-213ENST00000464867 CD36P16671 472 aa6.53□□□□□ -1.36
APP-213ENST00000464867 CELP19835 753 aa6.53□□□□□ -1.36
APP-213ENST00000464867 ALDH3B2P48448 385 aa6.53□□□□□ -1.36
APP-213ENST00000464867 TOR2AQ5JU69 321 aa6.53□□□□□ -1.36
APP-213ENST00000464867 SPATA24Q86W54 205 aa6.53□□□□□ -1.36
APP-213ENST00000464867 PUSL1Q8N0Z8 303 aaKnown RBP6.53□□□□□ -1.36
APP-213ENST00000464867 CBR4Q8N4T8 237 aa6.53□□□□□ -1.36
APP-213ENST00000464867 GDPD1Q8N9F7 314 aa6.53□□□□□ -1.36
APP-213ENST00000464867 ST8SIA2Q92186 375 aa6.53□□□□□ -1.36
APP-213ENST00000464867 SLC7A6OSQ96CW6 309 aaPredicted RBP6.53□□□□□ -1.36
APP-213ENST00000464867 C5orf30Q96GV9 206 aa6.53□□□□□ -1.36
APP-213ENST00000464867 CMSS1Q9BQ75 279 aaKnown RBP6.53□□□□□ -1.36
APP-213ENST00000464867 FNDC4Q9H6D8 234 aaPredicted RBP6.53□□□□□ -1.36
APP-213ENST00000464867 HRASLSQ9HDD0 168 aa6.53□□□□□ -1.36
APP-213ENST00000464867 C11orf21Q9P2W6 132 aa6.53□□□□□ -1.36
APP-213ENST00000464867 IGHV3-66A0A0C4DH42 116 aa6.52□□□□□ -1.37
APP-213ENST00000464867 A0A1W2PPK0 400 aa6.52□□□□□ -1.37
APP-213ENST00000464867 A0A1W2PS18 150 aa6.52□□□□□ -1.37
APP-213ENST00000464867 IGLC7A0M8Q6 106 aa6.52□□□□□ -1.37
APP-213ENST00000464867 ZNF705FA8MVS1 300 aaPredicted RBP6.52□□□□□ -1.37
APP-213ENST00000464867 K7EQG2 157 aa6.52□□□□□ -1.37
APP-213ENST00000464867 CD3GP09693 182 aa6.52□□□□□ -1.37
APP-213ENST00000464867 ZNF705DP0CH99 300 aaPredicted RBP6.52□□□□□ -1.37
APP-213ENST00000464867 ZNF705BP0CI00 300 aaPredicted RBP6.52□□□□□ -1.37
APP-213ENST00000464867 POLR2IP36954 125 aaKnown RBP6.52□□□□□ -1.37
APP-213ENST00000464867 TAS2R43P59537 309 aa6.52□□□□□ -1.37
APP-213ENST00000464867 HAMPP81172 84 aa6.52□□□□□ -1.37
APP-213ENST00000464867 ODF1Q14990 250 aa6.52□□□□□ -1.37
APP-213ENST00000464867 RCN1Q15293 331 aa6.52□□□□□ -1.37
APP-213ENST00000464867 YIF1BQ5BJH7 314 aa6.52□□□□□ -1.37
APP-213ENST00000464867 IGSF11Q5DX21 431 aa6.52□□□□□ -1.37
APP-213ENST00000464867 OR10K2Q6IF99 312 aa6.52□□□□□ -1.37
APP-213ENST00000464867 HSD17B13Q7Z5P4 300 aaPredicted RBP6.52□□□□□ -1.37
APP-213ENST00000464867 SMIM19Q96E16 107 aa6.52□□□□□ -1.37
APP-213ENST00000464867 RAB40CQ96S21 281 aa6.52□□□□□ -1.37
APP-213ENST00000464867 SLC29A1Q99808 456 aa6.52□□□□□ -1.37
APP-213ENST00000464867 CIB1Q99828 191 aa6.52□□□□□ -1.37
APP-213ENST00000464867 URM1Q9BTM9 101 aaKnown RBP6.52□□□□□ -1.37
APP-213ENST00000464867 CENPOQ9BU64 300 aa6.52□□□□□ -1.37
APP-213ENST00000464867 TM2D1Q9BX74 207 aa6.52□□□□□ -1.37
APP-213ENST00000464867 KRTAP1-5Q9BYS1 174 aa6.52□□□□□ -1.37
APP-213ENST00000464867 VSIRQ9H7M9 311 aa6.52□□□□□ -1.37
APP-213ENST00000464867 ZNF586Q9NXT0 402 aa6.52□□□□□ -1.37
APP-213ENST00000464867 HSF4Q9ULV5 492 aa6.52□□□□□ -1.37
APP-213ENST00000464867 YTHDF2Q9Y5A9 579 aaKnown RBP6.52□□□□□ -1.37
APP-213ENST00000464867 TRBV6-7A0A0A0MS04 114 aa6.51□□□□□ -1.37
APP-213ENST00000464867 TRBV5-5A0A0J9YX44 114 aa6.51□□□□□ -1.37
APP-213ENST00000464867 F5H768 121 aa6.51□□□□□ -1.37
APP-213ENST00000464867 DIRAS3O95661 229 aa6.51□□□□□ -1.37
APP-213ENST00000464867 HBE1P02100 147 aa6.51□□□□□ -1.37
APP-213ENST00000464867 OR13C7P0DN81 318 aa6.51□□□□□ -1.37
APP-213ENST00000464867 EIF2B2P49770 351 aaKnown RBP6.51□□□□□ -1.37
APP-213ENST00000464867 THOC7Q6I9Y2 204 aaKnown RBP6.51□□□□□ -1.37
APP-213ENST00000464867 TMPRSS11AQ6ZMR5 421 aa6.51□□□□□ -1.37
APP-213ENST00000464867 TMEM70Q9BUB7 260 aa6.51□□□□□ -1.37
APP-213ENST00000464867 QTRT1Q9BXR0 403 aaKnown RBP6.51□□□□□ -1.37
APP-213ENST00000464867 LOC102723971A0A1B0GUV8 181 aa6.5□□□□□ -1.37
APP-213ENST00000464867 CGB1A6NKQ9 187 aa6.5□□□□□ -1.37
APP-213ENST00000464867 SLC22A5O76082 557 aa6.5□□□□□ -1.37
APP-213ENST00000464867 SERPINE2P07093 398 aa6.5□□□□□ -1.37
APP-213ENST00000464867 DCKP27707 260 aa6.5□□□□□ -1.37
APP-213ENST00000464867 HOXA1P49639 335 aaPredicted RBP6.5□□□□□ -1.37
APP-213ENST00000464867 LINC00315P59091 139 aa6.5□□□□□ -1.37
APP-213ENST00000464867 PSMG4Q5JS54 123 aa6.5□□□□□ -1.37
APP-213ENST00000464867 OGFRL1Q5TC84 451 aaPredicted RBP6.5□□□□□ -1.37
APP-213ENST00000464867 XAF1Q6GPH4 301 aa6.5□□□□□ -1.37
APP-213ENST00000464867 ZNF773Q6PK81 442 aa6.5□□□□□ -1.37
APP-213ENST00000464867 TCTEX1D2Q8WW35 142 aa6.5□□□□□ -1.37
APP-213ENST00000464867 NARS2Q96I59 477 aaKnown RBP6.5□□□□□ -1.37
APP-213ENST00000464867 Q96MT0 163 aa6.5□□□□□ -1.37
APP-213ENST00000464867 HSD17B10Q99714 261 aaKnown RBP6.5□□□□□ -1.37
APP-213ENST00000464867 C7orf50Q9BRJ6 194 aaKnown RBP6.5□□□□□ -1.37
APP-213ENST00000464867 GABARAPL3Q9BY60 117 aa6.5□□□□□ -1.37
APP-213ENST00000464867 NXF2Q9GZY0 626 aaKnown RBP6.5□□□□□ -1.37
APP-213ENST00000464867 GABARAPL1Q9H0R8 117 aa6.5□□□□□ -1.37
APP-213ENST00000464867 BET1LQ9NYM9 111 aa6.5□□□□□ -1.37
APP-213ENST00000464867 GOLT1BQ9Y3E0 138 aa6.5□□□□□ -1.37
APP-213ENST00000464867 HELTA6NFD8 242 aa6.49□□□□□ -1.37
APP-213ENST00000464867 SOCS1O15524 211 aa6.49□□□□□ -1.37
APP-213ENST00000464867 OGG1O15527 345 aa6.49□□□□□ -1.37
APP-213ENST00000464867 APOHP02749 345 aaPredicted RBP6.49□□□□□ -1.37
APP-213ENST00000464867 NPPCP23582 126 aa6.49□□□□□ -1.37
APP-213ENST00000464867 MFAP4P55083 255 aa6.49□□□□□ -1.37
APP-213ENST00000464867 SNRPD3P62318 126 aaKnown RBP6.49□□□□□ -1.37
APP-213ENST00000464867 SMN1Q16637 294 aaKnown RBP6.49□□□□□ -1.37
APP-213ENST00000464867 RRN3P1Q2M238 152 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms