RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 PIGBOS1A0A0B4J2F0 54 aa11.19□□□□□ -0.62
SQSTM1-205ENST00000464493 CYB5BO43169 146 aa11.19□□□□□ -0.62
SQSTM1-205ENST00000464493 ST8SIA3O43173 380 aa11.19□□□□□ -0.62
SQSTM1-205ENST00000464493 NDUFB8O95169 186 aa11.19□□□□□ -0.62
SQSTM1-205ENST00000464493 SFT2D2O95562 160 aa11.19□□□□□ -0.62
SQSTM1-205ENST00000464493 DUS4LO95620 317 aaKnown RBP11.19□□□□□ -0.62
SQSTM1-205ENST00000464493 IFNA17P01571 189 aa11.19□□□□□ -0.62
SQSTM1-205ENST00000464493 UBE2MP61081 183 aaKnown RBP11.19□□□□□ -0.62
SQSTM1-205ENST00000464493 PPP1R1AQ13522 171 aa11.19□□□□□ -0.62
SQSTM1-205ENST00000464493 SAMD5Q5TGI4 173 aa11.19□□□□□ -0.62
SQSTM1-205ENST00000464493 C1QL4Q86Z23 238 aa11.19□□□□□ -0.62
SQSTM1-205ENST00000464493 SLC35G3Q8N808 338 aa11.19□□□□□ -0.62
SQSTM1-205ENST00000464493 MCRIP2Q9BUT9 160 aaKnown RBP11.19□□□□□ -0.62
SQSTM1-205ENST00000464493 THYN1Q9P016 225 aa11.19□□□□□ -0.62
SQSTM1-205ENST00000464493 SHPKQ9UHJ6 478 aa11.19□□□□□ -0.62
SQSTM1-205ENST00000464493 SLURP1P55000 103 aa11.18□□□□□ -0.62
SQSTM1-205ENST00000464493 ERHP84090 104 aaKnown RBP11.18□□□□□ -0.62
SQSTM1-205ENST00000464493 EXOSC2Q13868 293 aaKnown RBP11.18□□□□□ -0.62
SQSTM1-205ENST00000464493 SPINK9Q5DT21 86 aa11.18□□□□□ -0.62
SQSTM1-205ENST00000464493 SLC25A24Q6NUK1 477 aa11.18□□□□□ -0.62
SQSTM1-205ENST00000464493 LYZL2Q7Z4W2 148 aa11.18□□□□□ -0.62
SQSTM1-205ENST00000464493 OR2C3Q8N628 320 aa11.18□□□□□ -0.62
SQSTM1-205ENST00000464493 PLEKHA3Q9HB20 300 aa11.18□□□□□ -0.62
SQSTM1-205ENST00000464493 CACNG5Q9UF02 275 aa11.18□□□□□ -0.62
SQSTM1-205ENST00000464493 DMRT1Q9Y5R6 373 aa11.18□□□□□ -0.62
SQSTM1-205ENST00000464493 F11RQ9Y624 299 aaKnown RBP11.18□□□□□ -0.62
SQSTM1-205ENST00000464493 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.17□□□□□ -0.62
SQSTM1-205ENST00000464493 UPK1BO75841 260 aa11.17□□□□□ -0.62
SQSTM1-205ENST00000464493 TRBV12-3P01733 135 aa11.17□□□□□ -0.62
SQSTM1-205ENST00000464493 ZP3P21754 424 aa11.17□□□□□ -0.62
SQSTM1-205ENST00000464493 ANKRD55Q3KP44 614 aa11.17□□□□□ -0.62
SQSTM1-205ENST00000464493 AARDQ4LEZ3 155 aa11.17□□□□□ -0.62
SQSTM1-205ENST00000464493 FAM209BQ5JX69 171 aa11.17□□□□□ -0.62
SQSTM1-205ENST00000464493 LRTM2Q8N967 370 aa11.17□□□□□ -0.62
SQSTM1-205ENST00000464493 OR1L6Q8NGR2 347 aa11.17□□□□□ -0.62
SQSTM1-205ENST00000464493 OR52E5Q8NH55 327 aa11.17□□□□□ -0.62
SQSTM1-205ENST00000464493 DCUN1D4Q92564 292 aa11.17□□□□□ -0.62
SQSTM1-205ENST00000464493 DLX4Q92988 240 aaPredicted RBP11.17□□□□□ -0.62
SQSTM1-205ENST00000464493 EEF1AKMT3Q96AZ1 226 aa11.17□□□□□ -0.62
SQSTM1-205ENST00000464493 MEGF8Q7Z7M0 2845 aa11.16□□□□□ -0.62
SQSTM1-205ENST00000464493 DUXBA0A1W2PPF3 345 aa11.16□□□□□ -0.62
SQSTM1-205ENST00000464493 C9orf170A2RU37 121 aa11.16□□□□□ -0.62
SQSTM1-205ENST00000464493 INS-IGF2F8WCM5 200 aa11.16□□□□□ -0.62
SQSTM1-205ENST00000464493 OVOL1O14753 267 aa11.16□□□□□ -0.62
SQSTM1-205ENST00000464493 TCRBP04435 133 aa11.16□□□□□ -0.62
SQSTM1-205ENST00000464493 OR4E1P0C645 316 aa11.16□□□□□ -0.62
SQSTM1-205ENST00000464493 SULT1A3P0DMM9 295 aa11.16□□□□□ -0.62
SQSTM1-205ENST00000464493 SULT1A4P0DMN0 295 aa11.16□□□□□ -0.62
SQSTM1-205ENST00000464493 ANXA7P20073 488 aaKnown RBP11.16□□□□□ -0.62
SQSTM1-205ENST00000464493 HOXD3P31249 432 aaPredicted RBP11.16□□□□□ -0.62
SQSTM1-205ENST00000464493 MFAP2P55001 183 aa11.16□□□□□ -0.62
SQSTM1-205ENST00000464493 SPCS3P61009 180 aa11.16□□□□□ -0.62
SQSTM1-205ENST00000464493 NMSQ5H8A3 153 aa11.16□□□□□ -0.62
SQSTM1-205ENST00000464493 MZT2BQ6NZ67 158 aa11.16□□□□□ -0.62
SQSTM1-205ENST00000464493 OR1P1Q8NH06 330 aa11.16□□□□□ -0.62
SQSTM1-205ENST00000464493 CXorf58Q96LI9 332 aa11.16□□□□□ -0.62
SQSTM1-205ENST00000464493 GPR61Q9BZJ8 451 aa11.16□□□□□ -0.62
SQSTM1-205ENST00000464493 ENY2Q9NPA8 101 aa11.16□□□□□ -0.62
SQSTM1-205ENST00000464493 TBC1D24Q9ULP9 559 aa11.16□□□□□ -0.62
SQSTM1-205ENST00000464493 TRBV7-1A0A0A6YYK4 115 aa11.15□□□□□ -0.62
SQSTM1-205ENST00000464493 FAM240BA0A1B0GVZ2 78 aa11.15□□□□□ -0.62
SQSTM1-205ENST00000464493 IGHV3-23P01764 117 aa11.15□□□□□ -0.62
SQSTM1-205ENST00000464493 HLA-AP01891 365 aaKnown RBP11.15□□□□□ -0.62
SQSTM1-205ENST00000464493 DHRS2Q13268 280 aa11.15□□□□□ -0.62
SQSTM1-205ENST00000464493 ASAH1Q13510 395 aa11.15□□□□□ -0.62
SQSTM1-205ENST00000464493 SMCO1Q147U7 214 aa11.15□□□□□ -0.62
SQSTM1-205ENST00000464493 BEAN1Q3B7T3 259 aa11.15□□□□□ -0.62
SQSTM1-205ENST00000464493 C4orf46Q504U0 113 aa11.15□□□□□ -0.62
SQSTM1-205ENST00000464493 ZNF114Q8NC26 417 aa11.15□□□□□ -0.62
SQSTM1-205ENST00000464493 VN1R17PQ8TDU5 208 aa11.15□□□□□ -0.62
SQSTM1-205ENST00000464493 C20orf85Q9H1P6 137 aa11.15□□□□□ -0.62
SQSTM1-205ENST00000464493 CACFD1Q9UGQ2 172 aa11.15□□□□□ -0.62
SQSTM1-205ENST00000464493 S4R3C0 116 aa11.15□□□□□ -0.62
SQSTM1-205ENST00000464493 A0A1B0GU03 582 aa11.14□□□□□ -0.63
SQSTM1-205ENST00000464493 MFSD2BA6NFX1 497 aa11.14□□□□□ -0.63
SQSTM1-205ENST00000464493 SEC14L6B5MCN3 397 aa11.14□□□□□ -0.63
SQSTM1-205ENST00000464493 BMPR1BO00238 502 aa11.14□□□□□ -0.63
SQSTM1-205ENST00000464493 SNCAP37840 140 aa11.14□□□□□ -0.63
SQSTM1-205ENST00000464493 HOXA1P49639 335 aaPredicted RBP11.14□□□□□ -0.63
SQSTM1-205ENST00000464493 IFITM3Q01628 133 aa11.14□□□□□ -0.63
SQSTM1-205ENST00000464493 KLF5Q13887 457 aaPredicted RBP11.14□□□□□ -0.63
SQSTM1-205ENST00000464493 RPEL1Q2QD12 228 aa11.14□□□□□ -0.63
SQSTM1-205ENST00000464493 PDLIM3Q53GG5 364 aaPredicted RBP11.14□□□□□ -0.63
SQSTM1-205ENST00000464493 KPRPQ5T749 579 aaPredicted RBP11.14□□□□□ -0.63
SQSTM1-205ENST00000464493 C9orf66Q5T8R8 295 aa11.14□□□□□ -0.63
SQSTM1-205ENST00000464493 CLEC19AQ6UXS0 136 aa11.14□□□□□ -0.63
SQSTM1-205ENST00000464493 LYG2Q86SG7 212 aa11.14□□□□□ -0.63
SQSTM1-205ENST00000464493 CCDC140Q96MF4 163 aa11.14□□□□□ -0.63
SQSTM1-205ENST00000464493 TMED3Q9Y3Q3 217 aa11.14□□□□□ -0.63
SQSTM1-205ENST00000464493 TRAV6A0A075B6T7 132 aa11.13□□□□□ -0.63
SQSTM1-205ENST00000464493 CEBPZOSA8MTT3 80 aa11.13□□□□□ -0.63
SQSTM1-205ENST00000464493 PPP5D1E7EU14 171 aa11.13□□□□□ -0.63
SQSTM1-205ENST00000464493 CLEC3BP05452 202 aa11.13□□□□□ -0.63
SQSTM1-205ENST00000464493 HOXB5P09067 269 aa11.13□□□□□ -0.63
SQSTM1-205ENST00000464493 SUB1P53999 127 aaKnown RBP eCLIP11.13□□□□□ -0.63
SQSTM1-205ENST00000464493 DEFA6Q01524 100 aa11.13□□□□□ -0.63
SQSTM1-205ENST00000464493 TATDN3Q17R31 274 aa11.13□□□□□ -0.63
SQSTM1-205ENST00000464493 COQ8AQ8NI60 647 aa11.13□□□□□ -0.63
SQSTM1-205ENST00000464493 ZNF502Q8TBZ5 544 aa11.13□□□□□ -0.63
SQSTM1-205ENST00000464493 SCARB1Q8WTV0 552 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 163.8 ms