RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 IGKV1-5P01602 117 aa2.43□□□□□ -2.02
ITGB1-208ENST00000464001 TRGV3P03979 118 aa2.43□□□□□ -2.02
ITGB1-208ENST00000464001 MPC1LP0DKB6 136 aa2.43□□□□□ -2.02
ITGB1-208ENST00000464001 CXCL12P48061 93 aa2.43□□□□□ -2.02
ITGB1-208ENST00000464001 FKBP1AP62942 108 aaKnown RBP2.43□□□□□ -2.02
ITGB1-208ENST00000464001 SCGB2B2Q4G0G5 96 aa2.43□□□□□ -2.02
ITGB1-208ENST00000464001 DNLZQ5SXM8 178 aa2.43□□□□□ -2.02
ITGB1-208ENST00000464001 FKBP1CQ5VVH2 108 aa2.43□□□□□ -2.02
ITGB1-208ENST00000464001 KTN1-AS1Q86SY8 53 aa2.43□□□□□ -2.02
ITGB1-208ENST00000464001 LRRC28Q86X40 367 aaPredicted RBP2.43□□□□□ -2.02
ITGB1-208ENST00000464001 ZNF101Q8IZC7 436 aa2.43□□□□□ -2.02
ITGB1-208ENST00000464001 DAND5Q8N907 189 aa2.43□□□□□ -2.02
ITGB1-208ENST00000464001 TSTD1Q8NFU3 115 aa2.43□□□□□ -2.02
ITGB1-208ENST00000464001 CANT1Q8WVQ1 401 aa2.43□□□□□ -2.02
ITGB1-208ENST00000464001 ACOT12Q8WYK0 555 aa2.43□□□□□ -2.02
ITGB1-208ENST00000464001 ZC2HC1AQ96GY0 325 aa2.43□□□□□ -2.02
ITGB1-208ENST00000464001 NARS2Q96I59 477 aaKnown RBP2.43□□□□□ -2.02
ITGB1-208ENST00000464001 TM2D3Q9BRN9 247 aa2.43□□□□□ -2.02
ITGB1-208ENST00000464001 OR2D2Q9H210 308 aa2.43□□□□□ -2.02
ITGB1-208ENST00000464001 EFCAB1Q9HAE3 211 aa2.43□□□□□ -2.02
ITGB1-208ENST00000464001 MED31Q9Y3C7 131 aa2.43□□□□□ -2.02
ITGB1-208ENST00000464001 RBM7Q9Y580 266 aaKnown RBP2.43□□□□□ -2.02
ITGB1-208ENST00000464001 ZNF407Q9C0G0 2248 aa2.43□□□□□ -2.02
ITGB1-208ENST00000464001 ZNF518AQ6AHZ1 1483 aa2.43□□□□□ -2.02
ITGB1-208ENST00000464001 MYH9P35579 1960 aaKnown RBP2.43□□□□□ -2.02
ITGB1-208ENST00000464001 OVOS2A0A0J9YW53 1432 aa2.42□□□□□ -2.02
ITGB1-208ENST00000464001 BCL9O00512 1426 aa2.42□□□□□ -2.02
ITGB1-208ENST00000464001 FMN1Q68DA7 1419 aa2.42□□□□□ -2.02
ITGB1-208ENST00000464001 OVOS2Q6IE36 1432 aa2.42□□□□□ -2.02
ITGB1-208ENST00000464001 GREB1Q4ZG55 1949 aa2.42□□□□□ -2.02
ITGB1-208ENST00000464001 ANAPC1Q9H1A4 1944 aa2.42□□□□□ -2.02
ITGB1-208ENST00000464001 SPRR5A0A1B0GTR4 108 aa2.42□□□□□ -2.02
ITGB1-208ENST00000464001 TMEM269A0A1B0GVZ9 245 aa2.42□□□□□ -2.02
ITGB1-208ENST00000464001 A0A1B0GW64 132 aa2.42□□□□□ -2.02
ITGB1-208ENST00000464001 TRDV1A0A1B0GX56 115 aa2.42□□□□□ -2.02
ITGB1-208ENST00000464001 NKX2-6A6NCS4 301 aa2.42□□□□□ -2.02
ITGB1-208ENST00000464001 A8MWP4 228 aa2.42□□□□□ -2.02
ITGB1-208ENST00000464001 I3L521 148 aa2.42□□□□□ -2.02
ITGB1-208ENST00000464001 BET1O15155 118 aa2.42□□□□□ -2.02
ITGB1-208ENST00000464001 SMIM24O75264 130 aa2.42□□□□□ -2.02
ITGB1-208ENST00000464001 WISP3O95389 354 aaPredicted RBP2.42□□□□□ -2.02
ITGB1-208ENST00000464001 CDS2O95674 445 aa2.42□□□□□ -2.02
ITGB1-208ENST00000464001 SRP19P09132 144 aaKnown RBP2.42□□□□□ -2.02
ITGB1-208ENST00000464001 LINC00869P0C866 280 aa2.42□□□□□ -2.02
ITGB1-208ENST00000464001 CRYBB3P26998 211 aa2.42□□□□□ -2.02
ITGB1-208ENST00000464001 S100A11P31949 105 aa2.42□□□□□ -2.02
ITGB1-208ENST00000464001 RAB13P51153 203 aa2.42□□□□□ -2.02
ITGB1-208ENST00000464001 ZNF80P51504 273 aaPredicted RBP2.42□□□□□ -2.02
ITGB1-208ENST00000464001 KLF3P57682 345 aaPredicted RBP2.42□□□□□ -2.02
ITGB1-208ENST00000464001 TAS2R45P59539 299 aa2.42□□□□□ -2.02
ITGB1-208ENST00000464001 TAS2R30P59541 319 aa2.42□□□□□ -2.02
ITGB1-208ENST00000464001 SLC38A11Q08AI6 406 aa2.42□□□□□ -2.02
ITGB1-208ENST00000464001 LGALS9BQ3B8N2 356 aa2.42□□□□□ -2.02
ITGB1-208ENST00000464001 LGALS9CQ6DKI2 356 aa2.42□□□□□ -2.02
ITGB1-208ENST00000464001 PRSS54Q6PEW0 395 aa2.42□□□□□ -2.02
ITGB1-208ENST00000464001 SSX8Q7RTT4 187 aa2.42□□□□□ -2.02
ITGB1-208ENST00000464001 ZNF709Q8N972 641 aa2.42□□□□□ -2.02
ITGB1-208ENST00000464001 ZFP62Q8NB50 900 aaPredicted RBP2.42□□□□□ -2.02
ITGB1-208ENST00000464001 NUP35Q8NFH5 326 aa2.42□□□□□ -2.02
ITGB1-208ENST00000464001 LINC01560Q8TB33 94 aa2.42□□□□□ -2.02
ITGB1-208ENST00000464001 DCANP1Q8TF63 244 aa2.42□□□□□ -2.02
ITGB1-208ENST00000464001 H1FXQ92522 213 aaKnown RBP2.42□□□□□ -2.02
ITGB1-208ENST00000464001 RBPMSQ93062 196 aaKnown RBP2.42□□□□□ -2.02
ITGB1-208ENST00000464001 GPX7Q96SL4 187 aaPredicted RBP2.42□□□□□ -2.02
ITGB1-208ENST00000464001 C12orf57Q99622 126 aa2.42□□□□□ -2.02
ITGB1-208ENST00000464001 TBL1YQ9BQ87 522 aa2.42□□□□□ -2.02
ITGB1-208ENST00000464001 OR2H1Q9GZK4 316 aa2.42□□□□□ -2.02
ITGB1-208ENST00000464001 OR2J1Q9GZK6 312 aa2.42□□□□□ -2.02
ITGB1-208ENST00000464001 GABARAPL1Q9H0R8 117 aa2.42□□□□□ -2.02
ITGB1-208ENST00000464001 ZNRD1Q9P1U0 126 aa2.42□□□□□ -2.02
ITGB1-208ENST00000464001 U3KQ87 197 aa2.42□□□□□ -2.02
ITGB1-208ENST00000464001 LCTP09848 1927 aa2.42□□□□□ -2.02
ITGB1-208ENST00000464001 CRB1P82279 1406 aa2.42□□□□□ -2.02
ITGB1-208ENST00000464001 MYO10Q9HD67 2058 aa2.41□□□□□ -2.02
ITGB1-208ENST00000464001 SBF1O95248 1867 aa2.41□□□□□ -2.02
ITGB1-208ENST00000464001 PCM1Q15154 2024 aa2.41□□□□□ -2.02
ITGB1-208ENST00000464001 NUP98P52948 1817 aa2.41□□□□□ -2.02
ITGB1-208ENST00000464001 MEIKINA0A087WXM9 373 aa2.41□□□□□ -2.02
ITGB1-208ENST00000464001 A0A096LPI6 279 aa2.41□□□□□ -2.02
ITGB1-208ENST00000464001 IGHV3-21A0A0B4J1V1 117 aa2.41□□□□□ -2.02
ITGB1-208ENST00000464001 IGHV1-3A0A0C4DH29 117 aa2.41□□□□□ -2.02
ITGB1-208ENST00000464001 C9JAW5 83 aa2.41□□□□□ -2.02
ITGB1-208ENST00000464001 K7ERS5 55 aa2.41□□□□□ -2.02
ITGB1-208ENST00000464001 PGLYRP1O75594 196 aaPredicted RBP2.41□□□□□ -2.02
ITGB1-208ENST00000464001 TNFSF15O95150 251 aa2.41□□□□□ -2.02
ITGB1-208ENST00000464001 FAM107AO95990 144 aa2.41□□□□□ -2.02
ITGB1-208ENST00000464001 NRASP01111 189 aa2.41□□□□□ -2.02
ITGB1-208ENST00000464001 HRASP01112 189 aa2.41□□□□□ -2.02
ITGB1-208ENST00000464001 KRASP01116 189 aa2.41□□□□□ -2.02
ITGB1-208ENST00000464001 IGF2P01344 180 aa2.41□□□□□ -2.02
ITGB1-208ENST00000464001 IGKV1D-33P01593 117 aa2.41□□□□□ -2.02
ITGB1-208ENST00000464001 IGKV1-33P01594 117 aa2.41□□□□□ -2.02
ITGB1-208ENST00000464001 DBIP07108 87 aaKnown RBP2.41□□□□□ -2.02
ITGB1-208ENST00000464001 NTF3P20783 257 aa2.41□□□□□ -2.02
ITGB1-208ENST00000464001 S100PP25815 95 aa2.41□□□□□ -2.02
ITGB1-208ENST00000464001 FKBP2P26885 142 aaKnown RBP2.41□□□□□ -2.02
ITGB1-208ENST00000464001 CMPK1P30085 196 aa2.41□□□□□ -2.02
ITGB1-208ENST00000464001 INSL3P51460 131 aa2.41□□□□□ -2.02
ITGB1-208ENST00000464001 RRAS2P62070 204 aaPredicted RBP2.41□□□□□ -2.02
ITGB1-208ENST00000464001 RPL30P62888 115 aaKnown RBP2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms